RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 SSH1Q8WYL5 1049 aa10.51□□□□□ -0.73
PTPN20-224ENST00000510335 YTHDC2Q9H6S0 1430 aaKnown RBP10.5□□□□□ -0.73
PTPN20-224ENST00000510335 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
PTPN20-224ENST00000510335 RAB3GAP1Q15042 981 aa10.5□□□□□ -0.73
PTPN20-224ENST00000510335 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
PTPN20-224ENST00000510335 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
PTPN20-224ENST00000510335 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-224ENST00000510335 SLC52A1Q9NWF4 448 aa10.5□□□□□ -0.73
PTPN20-224ENST00000510335 TERF2IPQ9NYB0 399 aa10.5□□□□□ -0.73
PTPN20-224ENST00000510335 RICTORQ6R327 1708 aa10.5□□□□□ -0.73
PTPN20-224ENST00000510335 NRKQ7Z2Y5 1582 aa10.49□□□□□ -0.73
PTPN20-224ENST00000510335 FCHSD2O94868 740 aa10.49□□□□□ -0.73
PTPN20-224ENST00000510335 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
PTPN20-224ENST00000510335 IER5LQ5T953 404 aa10.49□□□□□ -0.73
PTPN20-224ENST00000510335 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
PTPN20-224ENST00000510335 CPSF1Q10570 1443 aaKnown RBP10.49□□□□□ -0.73
PTPN20-224ENST00000510335 MFAP1P55081 439 aaKnown RBP10.48□□□□□ -0.73
PTPN20-224ENST00000510335 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 CHD1LQ86WJ1 897 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 ITPRIPQ8IWB1 547 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 TMEM57Q8N5G2 664 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 KCNV2Q8TDN2 545 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 ABCC4O15439 1325 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
PTPN20-224ENST00000510335 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
PTPN20-224ENST00000510335 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
PTPN20-224ENST00000510335 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
PTPN20-224ENST00000510335 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
PTPN20-224ENST00000510335 COLQQ9Y215 455 aaPredicted RBP10.47□□□□□ -0.73
PTPN20-224ENST00000510335 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
PTPN20-224ENST00000510335 MICALL2Q8IY33 904 aa10.46□□□□□ -0.73
PTPN20-224ENST00000510335 TSR2Q969E8 191 aaKnown RBP10.46□□□□□ -0.73
PTPN20-224ENST00000510335 GRPEL1Q9HAV7 217 aa10.46□□□□□ -0.73
PTPN20-224ENST00000510335 RIMBP3CA6NJZ7 1639 aa10.46□□□□□ -0.74
PTPN20-224ENST00000510335 RIMBP3BA6NNM3 1639 aa10.46□□□□□ -0.74
PTPN20-224ENST00000510335 RIMBP3Q9UFD9 1639 aa10.46□□□□□ -0.74
PTPN20-224ENST00000510335 KNDC1Q76NI1 1749 aa10.46□□□□□ -0.74
PTPN20-224ENST00000510335 FYB1O15117 783 aa10.45□□□□□ -0.74
PTPN20-224ENST00000510335 TMEM132EQ6IEE7 984 aa10.45□□□□□ -0.74
PTPN20-224ENST00000510335 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
PTPN20-224ENST00000510335 MON2Q7Z3U7 1717 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 AGLP35573 1532 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
PTPN20-224ENST00000510335 POTEFA5A3E0 1075 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 K7ELQ4 463 aaPredicted RBP10.44□□□□□ -0.74
PTPN20-224ENST00000510335 ZNF853P0CG23 659 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 PLCG2P16885 1265 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
PTPN20-224ENST00000510335 RIPK4P57078 832 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 LMOD3Q0VAK6 560 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 HDGFL2Q7Z4V5 671 aaPredicted RBP10.44□□□□□ -0.74
PTPN20-224ENST00000510335 KIF2CQ99661 725 aa10.44□□□□□ -0.74
PTPN20-224ENST00000510335 ZBTB7BO15156 539 aaPredicted RBP10.43□□□□□ -0.74
PTPN20-224ENST00000510335 E2F4Q16254 413 aa10.43□□□□□ -0.74
PTPN20-224ENST00000510335 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
PTPN20-224ENST00000510335 TNPO1Q92973 898 aaKnown RBP10.43□□□□□ -0.74
PTPN20-224ENST00000510335 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
PTPN20-224ENST00000510335 HSP90AB1P08238 724 aaKnown RBP10.42□□□□□ -0.74
PTPN20-224ENST00000510335 GNAI1P63096 354 aa10.42□□□□□ -0.74
PTPN20-224ENST00000510335 MFSD10Q14728 455 aa10.42□□□□□ -0.74
PTPN20-224ENST00000510335 NFE2L2Q16236 605 aa10.42□□□□□ -0.74
PTPN20-224ENST00000510335 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
PTPN20-224ENST00000510335 API5Q9BZZ5 524 aaKnown RBP10.42□□□□□ -0.74
PTPN20-224ENST00000510335 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
PTPN20-224ENST00000510335 MYO5BQ9ULV0 1848 aa10.42□□□□□ -0.74
PTPN20-224ENST00000510335 ESPNB1AK53 854 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 RRP9O43818 475 aaKnown RBP10.41□□□□□ -0.74
PTPN20-224ENST00000510335 CDC45O75419 566 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 TERF1P54274 439 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 CCDC173Q0VFZ6 552 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 RABEP1Q15276 862 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 HS1BP3Q53T59 392 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 TMEM121BQ9BXQ6 578 aaPredicted RBP10.41□□□□□ -0.74
PTPN20-224ENST00000510335 TECPR2O15040 1411 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 C3P01024 1663 aa10.41□□□□□ -0.74
PTPN20-224ENST00000510335 CPS1P31327 1500 aa10.4□□□□□ -0.74
PTPN20-224ENST00000510335 GOLGA6L22H0YM25 854 aa10.4□□□□□ -0.74
PTPN20-224ENST00000510335 U2SURPO15042 1029 aaKnown RBP10.4□□□□□ -0.74
PTPN20-224ENST00000510335 VAMP4O75379 141 aa10.4□□□□□ -0.74
PTPN20-224ENST00000510335 CYP2E1P05181 493 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-224ENST00000510335 TPM2P07951 284 aa10.4□□□□□ -0.74
PTPN20-224ENST00000510335 DDX27Q96GQ7 796 aaKnown RBP10.4□□□□□ -0.74
PTPN20-224ENST00000510335 PANK2Q9BZ23 570 aa10.4□□□□□ -0.74
PTPN20-224ENST00000510335 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-224ENST00000510335 ATP10DQ9P241 1426 aa10.4□□□□□ -0.75
PTPN20-224ENST00000510335 RIMS2Q9UQ26 1411 aa10.4□□□□□ -0.75
PTPN20-224ENST00000510335 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 ZNF445P59923 1031 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
PTPN20-224ENST00000510335 NUCB2P80303 420 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 LNPKQ9C0E8 428 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 GGNBP2Q9H3C7 697 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
PTPN20-224ENST00000510335 C7P10643 843 aa10.38□□□□□ -0.75
PTPN20-224ENST00000510335 IDI1Q13907 227 aa10.38□□□□□ -0.75
PTPN20-224ENST00000510335 GLIPR1L2Q4G1C9 344 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms