RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
NEK1-205ENST00000510108 JCADQ9P266 1359 aa13.46□□□□□ -0.25
NEK1-205ENST00000510108 APAF1O14727 1248 aa13.46□□□□□ -0.25
NEK1-205ENST00000510108 GSE1Q14687 1217 aa13.46□□□□□ -0.25
NEK1-205ENST00000510108 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
NEK1-205ENST00000510108 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.26
NEK1-205ENST00000510108 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.26
NEK1-205ENST00000510108 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
NEK1-205ENST00000510108 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
NEK1-205ENST00000510108 KIAA0232Q92628 1395 aa13.45□□□□□ -0.26
NEK1-205ENST00000510108 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
NEK1-205ENST00000510108 PRKAR2BP31323 418 aa13.44□□□□□ -0.26
NEK1-205ENST00000510108 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
NEK1-205ENST00000510108 ERBB3P21860 1342 aa13.44□□□□□ -0.26
NEK1-205ENST00000510108 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
NEK1-205ENST00000510108 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
NEK1-205ENST00000510108 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
NEK1-205ENST00000510108 EYA1Q99502 592 aa13.43□□□□□ -0.26
NEK1-205ENST00000510108 HMOX1P09601 288 aa13.42□□□□□ -0.26
NEK1-205ENST00000510108 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
NEK1-205ENST00000510108 SPATA31A6Q5VVP1 1343 aa13.42□□□□□ -0.26
NEK1-205ENST00000510108 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
NEK1-205ENST00000510108 TMPOP42166 694 aaKnown RBP13.41□□□□□ -0.26
NEK1-205ENST00000510108 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
NEK1-205ENST00000510108 SULT6B1Q6IMI4 303 aa13.41□□□□□ -0.26
NEK1-205ENST00000510108 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
NEK1-205ENST00000510108 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
NEK1-205ENST00000510108 EVX2Q03828 476 aa13.4□□□□□ -0.26
NEK1-205ENST00000510108 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
NEK1-205ENST00000510108 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
NEK1-205ENST00000510108 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
NEK1-205ENST00000510108 PLCH1Q4KWH8 1693 aa13.4□□□□□ -0.26
NEK1-205ENST00000510108 NUTM2BA6NNL0 878 aaPredicted RBP13.39□□□□□ -0.27
NEK1-205ENST00000510108 NUTM2EB1AL46 878 aaPredicted RBP13.39□□□□□ -0.27
NEK1-205ENST00000510108 NEFMP07197 916 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 NUTM2AQ8IVF1 878 aaPredicted RBP13.39□□□□□ -0.27
NEK1-205ENST00000510108 PHACTR3Q96KR7 559 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 WDR63Q8IWG1 891 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
NEK1-205ENST00000510108 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
NEK1-205ENST00000510108 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
NEK1-205ENST00000510108 PARP4Q9UKK3 1724 aaKnown RBP13.38□□□□□ -0.27
NEK1-205ENST00000510108 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
NEK1-205ENST00000510108 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
NEK1-205ENST00000510108 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
NEK1-205ENST00000510108 IL16Q14005 1332 aa13.37□□□□□ -0.27
NEK1-205ENST00000510108 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
NEK1-205ENST00000510108 SLFN5Q08AF3 891 aa13.37□□□□□ -0.27
NEK1-205ENST00000510108 LMOD3Q0VAK6 560 aa13.37□□□□□ -0.27
NEK1-205ENST00000510108 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
NEK1-205ENST00000510108 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
NEK1-205ENST00000510108 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
NEK1-205ENST00000510108 WDR17Q8IZU2 1322 aa13.36□□□□□ -0.27
NEK1-205ENST00000510108 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
NEK1-205ENST00000510108 E9PSI1 815 aa13.36□□□□□ -0.27
NEK1-205ENST00000510108 RIPK4P57078 832 aa13.36□□□□□ -0.27
NEK1-205ENST00000510108 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
NEK1-205ENST00000510108 WNK3Q9BYP7 1800 aa13.35□□□□□ -0.27
NEK1-205ENST00000510108 ADAMTS2O95450 1211 aa13.35□□□□□ -0.27
NEK1-205ENST00000510108 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
NEK1-205ENST00000510108 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
NEK1-205ENST00000510108 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
NEK1-205ENST00000510108 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
NEK1-205ENST00000510108 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
NEK1-205ENST00000510108 MEGF6O75095 1541 aa13.33□□□□□ -0.28
NEK1-205ENST00000510108 SLIT2O94813 1529 aa13.33□□□□□ -0.28
NEK1-205ENST00000510108 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
NEK1-205ENST00000510108 FAM83GA6ND36 823 aa13.33□□□□□ -0.28
NEK1-205ENST00000510108 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
NEK1-205ENST00000510108 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
NEK1-205ENST00000510108 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
NEK1-205ENST00000510108 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.32□□□□□ -0.28
NEK1-205ENST00000510108 CRB1P82279 1406 aa13.32□□□□□ -0.28
NEK1-205ENST00000510108 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
NEK1-205ENST00000510108 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
NEK1-205ENST00000510108 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
NEK1-205ENST00000510108 SHANK3Q9BYB0 1731 aa13.31□□□□□ -0.28
NEK1-205ENST00000510108 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
NEK1-205ENST00000510108 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
NEK1-205ENST00000510108 PYGBP11216 843 aa13.31□□□□□ -0.28
NEK1-205ENST00000510108 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
NEK1-205ENST00000510108 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
NEK1-205ENST00000510108 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
NEK1-205ENST00000510108 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
NEK1-205ENST00000510108 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
NEK1-205ENST00000510108 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
NEK1-205ENST00000510108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.283e-6■■■■□ 22.6
NEK1-205ENST00000510108 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
NEK1-205ENST00000510108 LRP6O75581 1613 aa13.3□□□□□ -0.28
NEK1-205ENST00000510108 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
NEK1-205ENST00000510108 MYH16Q9H6N6 1097 aa13.29□□□□□ -0.28
NEK1-205ENST00000510108 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
NEK1-205ENST00000510108 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
NEK1-205ENST00000510108 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
NEK1-205ENST00000510108 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms