RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 KIF2CQ99661 725 aa13.67□□□□□ -0.22
SEC31A-228ENST00000509142 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
SEC31A-228ENST00000509142 DDIT3P35638 169 aa13.67□□□□□ -0.22
SEC31A-228ENST00000509142 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
SEC31A-228ENST00000509142 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
SEC31A-228ENST00000509142 MCM4P33991 863 aa13.66□□□□□ -0.22
SEC31A-228ENST00000509142 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 DLG5Q8TDM6 1919 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
SEC31A-228ENST00000509142 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 APBB1O00213 710 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 STK31Q9BXU1 1019 aa13.65□□□□□ -0.22
SEC31A-228ENST00000509142 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
SEC31A-228ENST00000509142 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
SEC31A-228ENST00000509142 SLIT1O75093 1534 aa13.64□□□□□ -0.23
SEC31A-228ENST00000509142 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
SEC31A-228ENST00000509142 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
SEC31A-228ENST00000509142 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
SEC31A-228ENST00000509142 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
SEC31A-228ENST00000509142 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
SEC31A-228ENST00000509142 PTPRCP08575 1304 aa13.63□□□□□ -0.23
SEC31A-228ENST00000509142 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
SEC31A-228ENST00000509142 SSH2Q76I76 1423 aa13.63□□□□□ -0.23
SEC31A-228ENST00000509142 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■□□□□ 9.8
SEC31A-228ENST00000509142 ARXQ96QS3 562 aa13.63□□□□□ -0.23
SEC31A-228ENST00000509142 FSD2A1L4K1 749 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 PANK2Q9BZ23 570 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 HOXC9P31274 260 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
SEC31A-228ENST00000509142 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
SEC31A-228ENST00000509142 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
SEC31A-228ENST00000509142 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
SEC31A-228ENST00000509142 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
SEC31A-228ENST00000509142 IGSF1Q8N6C5 1336 aa13.61□□□□□ -0.23
SEC31A-228ENST00000509142 PSME1Q06323 249 aa13.61□□□□□ -0.23
SEC31A-228ENST00000509142 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
SEC31A-228ENST00000509142 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
SEC31A-228ENST00000509142 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
SEC31A-228ENST00000509142 TOPAZ1Q8N9V7 1692 aa13.6□□□□□ -0.23
SEC31A-228ENST00000509142 F6X3S4 739 aa13.6□□□□□ -0.23
SEC31A-228ENST00000509142 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
SEC31A-228ENST00000509142 MEIS3Q99687 375 aa13.6□□□□□ -0.23
SEC31A-228ENST00000509142 HMMRO75330 724 aa13.6□□□□□ -0.23
SEC31A-228ENST00000509142 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
SEC31A-228ENST00000509142 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
SEC31A-228ENST00000509142 FER1L4A9Z1Z3 1794 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 CRB1P82279 1406 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 FAM43AQ8N2R8 423 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 CDC45O75419 566 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 FKBP5Q13451 457 aaPredicted RBP13.59□□□□□ -0.23
SEC31A-228ENST00000509142 TBC1D9Q6ZT07 1266 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 G2E3Q7L622 706 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
SEC31A-228ENST00000509142 TRAK2O60296 914 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
SEC31A-228ENST00000509142 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
SEC31A-228ENST00000509142 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
SEC31A-228ENST00000509142 MSH6P52701 1360 aa13.58□□□□□ -0.23
SEC31A-228ENST00000509142 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
SEC31A-228ENST00000509142 SNX21Q969T3 373 aa13.58□□□□□ -0.24
SEC31A-228ENST00000509142 GSPT1P15170 499 aaKnown RBP13.58□□□□□ -0.24
SEC31A-228ENST00000509142 KDRP35968 1356 aa13.57□□□□□ -0.24
SEC31A-228ENST00000509142 EIF5BO60841 1220 aaKnown RBP13.57□□□□□ -0.24
SEC31A-228ENST00000509142 PLEKHM2Q8IWE5 1019 aa13.57□□□□□ -0.24
SEC31A-228ENST00000509142 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
SEC31A-228ENST00000509142 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
SEC31A-228ENST00000509142 RGS12O14924 1447 aa13.56□□□□□ -0.24
SEC31A-228ENST00000509142 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
SEC31A-228ENST00000509142 CASC1Q6TDU7 716 aa13.56□□□□□ -0.24
SEC31A-228ENST00000509142 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
SEC31A-228ENST00000509142 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
SEC31A-228ENST00000509142 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
SEC31A-228ENST00000509142 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
SEC31A-228ENST00000509142 FLIIQ13045 1269 aa13.55□□□□□ -0.24
SEC31A-228ENST00000509142 GNAI2P04899 355 aa13.55□□□□□ -0.24
SEC31A-228ENST00000509142 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
SEC31A-228ENST00000509142 NALCNQ8IZF0 1738 aa13.54□□□□□ -0.24
SEC31A-228ENST00000509142 IL17REQ8NFR9 667 aa13.54□□□□□ -0.24
SEC31A-228ENST00000509142 OTUD7AQ8TE49 926 aaPredicted RBP13.54□□□□□ -0.24
SEC31A-228ENST00000509142 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
SEC31A-228ENST00000509142 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
SEC31A-228ENST00000509142 ATP10DQ9P241 1426 aa13.53□□□□□ -0.24
SEC31A-228ENST00000509142 GOLGA6L3A6NEY3 463 aa13.53□□□□□ -0.24
SEC31A-228ENST00000509142 EIF2S2P20042 333 aaKnown RBP13.53□□□□□ -0.24
SEC31A-228ENST00000509142 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
SEC31A-228ENST00000509142 IP6K1Q92551 441 aa13.53□□□□□ -0.24
SEC31A-228ENST00000509142 GNAI3P08754 354 aa13.53□□□□□ -0.24
SEC31A-228ENST00000509142 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
SEC31A-228ENST00000509142 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
SEC31A-228ENST00000509142 HDGFL1Q5TGJ6 251 aa13.53□□□□□ -0.24
SEC31A-228ENST00000509142 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms