RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 DDX54Q8TDD1 881 aaKnown RBP37.9■■■■□ 3.66
MSX2-202ENST00000507785 NHSQ6T4R5 1651 aa37.9■■■■□ 3.66
MSX2-202ENST00000507785 KAT6BQ8WYB5 2073 aa37.9■■■■□ 3.66
MSX2-202ENST00000507785 IL13P35225 146 aa37.89■■■■□ 3.66
MSX2-202ENST00000507785 APBA3O96018 575 aa37.88■■■■□ 3.65
MSX2-202ENST00000507785 EN1Q05925 392 aaPredicted RBP37.88■■■■□ 3.65
MSX2-202ENST00000507785 PTF1AQ7RTS3 328 aa37.88■■■■□ 3.65
MSX2-202ENST00000507785 BCL11BQ9C0K0 894 aaPredicted RBP37.88■■■■□ 3.65
MSX2-202ENST00000507785 COL3A1P02461 1466 aaPredicted RBP37.85■■■■□ 3.65
MSX2-202ENST00000507785 DDX10Q13206 875 aaKnown RBP37.85■■■■□ 3.65
MSX2-202ENST00000507785 CAMKK2Q96RR4 588 aa37.83■■■■□ 3.65
MSX2-202ENST00000507785 RGPD3A6NKT7 1758 aaPredicted RBP37.82■■■■□ 3.64
MSX2-202ENST00000507785 RGPD4Q7Z3J3 1758 aa37.82■■■■□ 3.64
MSX2-202ENST00000507785 PLEKHG2Q9H7P9 1386 aa37.81■■■■□ 3.64
MSX2-202ENST00000507785 KCNQ2O43526 872 aa37.81■■■■□ 3.64
MSX2-202ENST00000507785 PCDH11XQ9BZA7 1347 aa37.81■■■■□ 3.64
MSX2-202ENST00000507785 PCDH11YQ9BZA8 1340 aa37.81■■■■□ 3.64
MSX2-202ENST00000507785 ACSBG1Q96GR2 724 aa37.8■■■■□ 3.64
MSX2-202ENST00000507785 DOT1LQ8TEK3 1739 aa37.8■■■■□ 3.64
MSX2-202ENST00000507785 PARD3Q8TEW0 1356 aa37.8■■■■□ 3.64
MSX2-202ENST00000507785 RREB1Q92766 1687 aa37.79■■■■□ 3.64
MSX2-202ENST00000507785 PPP2R1AP30153 589 aa37.79■■■■□ 3.64
MSX2-202ENST00000507785 EZH2Q15910 746 aaKnown RBP37.79■■■■□ 3.64
MSX2-202ENST00000507785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.79■■■■□ 3.64
MSX2-202ENST00000507785 KDRP35968 1356 aa37.79■■■■□ 3.64
MSX2-202ENST00000507785 CYP27B1O15528 508 aa37.78■■■■□ 3.64
MSX2-202ENST00000507785 AEBP1Q8IUX7 1158 aa37.78■■■■□ 3.64
MSX2-202ENST00000507785 BTAF1O14981 1849 aa37.77■■■■□ 3.64
MSX2-202ENST00000507785 DIAPH1O60610 1272 aaKnown RBP37.76■■■■□ 3.64
MSX2-202ENST00000507785 PLSCR1O15162 318 aa37.75■■■■□ 3.63
MSX2-202ENST00000507785 SULT6B1Q6IMI4 303 aa37.75■■■■□ 3.63
MSX2-202ENST00000507785 SPG7Q9UQ90 795 aa37.75■■■■□ 3.63
MSX2-202ENST00000507785 NUP188Q5SRE5 1749 aa37.72■■■■□ 3.63
MSX2-202ENST00000507785 TOGARAM1Q9Y4F4 1720 aa37.7■■■■□ 3.63
MSX2-202ENST00000507785 NKX1-1Q15270 411 aaPredicted RBP37.68■■■■□ 3.62
MSX2-202ENST00000507785 PRIM1P49642 420 aaKnown RBP37.67■■■■□ 3.62
MSX2-202ENST00000507785 CFAP53Q96M91 514 aa37.66■■■■□ 3.62
MSX2-202ENST00000507785 ITGB4P16144 1822 aa37.64■■■■□ 3.62
MSX2-202ENST00000507785 PHKG2P15735 406 aa37.64■■■■□ 3.62
MSX2-202ENST00000507785 HMOX1P09601 288 aa37.63■■■■□ 3.61
MSX2-202ENST00000507785 AMOTQ4VCS5 1084 aa37.63■■■■□ 3.61
MSX2-202ENST00000507785 PLEKHO1Q53GL0 409 aaPredicted RBP37.63■■■■□ 3.61
MSX2-202ENST00000507785 IFNL2Q8IZJ0 200 aa37.63■■■■□ 3.61
MSX2-202ENST00000507785 PROM2Q8N271 834 aa37.62■■■■□ 3.61
MSX2-202ENST00000507785 ZNF316A6NFI3 1004 aaPredicted RBP37.61■■■■□ 3.61
MSX2-202ENST00000507785 SYTL4Q96C24 671 aaPredicted RBP37.61■■■■□ 3.61
MSX2-202ENST00000507785 RALBP1Q15311 655 aa37.59■■■■□ 3.61
MSX2-202ENST00000507785 U2SURPO15042 1029 aaKnown RBP37.58■■■■□ 3.61
MSX2-202ENST00000507785 TXNRD1Q16881 649 aa37.56■■■■□ 3.6
MSX2-202ENST00000507785 ZNF530Q6P9A1 599 aaPredicted RBP37.56■■■■□ 3.6
MSX2-202ENST00000507785 LY75O60449 1722 aa37.54■■■■□ 3.6
MSX2-202ENST00000507785 NUDCQ9Y266 331 aa37.51■■■■□ 3.6
MSX2-202ENST00000507785 KDM6AO15550 1401 aaPredicted RBP37.5■■■■□ 3.59
MSX2-202ENST00000507785 HSP90AB1P08238 724 aaKnown RBP37.49■■■■□ 3.59
MSX2-202ENST00000507785 MPRIPQ6WCQ1 1025 aa37.49■■■■□ 3.59
MSX2-202ENST00000507785 SRCAPQ6ZRS2 3230 aa37.48■■■■□ 3.59
MSX2-202ENST00000507785 PSDA5PKW4 1024 aaPredicted RBP37.47■■■■□ 3.59
MSX2-202ENST00000507785 C1orf141Q5JVX7 400 aa37.47■■■■□ 3.59
MSX2-202ENST00000507785 DCAF5Q96JK2 942 aa37.47■■■■□ 3.59
MSX2-202ENST00000507785 PIGBQ92521 554 aa37.46■■■■□ 3.59
MSX2-202ENST00000507785 RSPH6AQ9H0K4 717 aa37.46■■■■□ 3.59
MSX2-202ENST00000507785 SCN11AQ9UI33 1791 aa37.46■■■■□ 3.59
MSX2-202ENST00000507785 PAPPAQ13219 1627 aa37.46■■■■□ 3.59
MSX2-202ENST00000507785 MYBBP1AQ9BQG0 1328 aaKnown RBP37.45■■■■□ 3.59
MSX2-202ENST00000507785 R3HDM1Q15032 1099 aaKnown RBP37.45■■■■□ 3.59
MSX2-202ENST00000507785 MTHFSDQ2M296 383 aaKnown RBP37.45■■■■□ 3.59
MSX2-202ENST00000507785 NBPF14Q5TI25 921 aa37.45■■■■□ 3.59
MSX2-202ENST00000507785 ANO8Q9HCE9 1232 aaPredicted RBP37.45■■■■□ 3.59
MSX2-202ENST00000507785 LRRC4BQ9NT99 713 aa37.44■■■■□ 3.58
MSX2-202ENST00000507785 VIRMAQ69YN4 1812 aaKnown RBP37.44■■■■□ 3.58
MSX2-202ENST00000507785 U2AF1L5P0DN76 240 aaPredicted RBP37.43■■■■□ 3.58
MSX2-202ENST00000507785 U2AF1Q01081 240 aaKnown RBP eCLIP37.43■■■■□ 3.58
MSX2-202ENST00000507785 AKAP4Q5JQC9 854 aa37.43■■■■□ 3.58
MSX2-202ENST00000507785 PRKRIP1Q9H875 184 aaPredicted RBP37.43■■■■□ 3.58
MSX2-202ENST00000507785 ERVV-2B6SEH9 535 aa37.42■■■■□ 3.58
MSX2-202ENST00000507785 SLC27A3Q5K4L6 730 aa37.41■■■■□ 3.58
MSX2-202ENST00000507785 TMOD3Q9NYL9 352 aa37.41■■■■□ 3.58
MSX2-202ENST00000507785 PRKAR2BP31323 418 aa37.4■■■■□ 3.58
MSX2-202ENST00000507785 ADAMTS7Q9UKP4 1686 aa37.4■■■■□ 3.58
MSX2-202ENST00000507785 FCHSD2O94868 740 aa37.38■■■■□ 3.57
MSX2-202ENST00000507785 PALLDQ8WX93 1383 aa37.38■■■■□ 3.57
MSX2-202ENST00000507785 PHACTR3Q96KR7 559 aa37.36■■■■□ 3.57
MSX2-202ENST00000507785 SMARCC1Q92922 1105 aaPredicted RBP37.35■■■■□ 3.57
MSX2-202ENST00000507785 KCNQ4P56696 695 aa37.33■■■■□ 3.57
MSX2-202ENST00000507785 GAS2L2Q8NHY3 880 aa37.33■■■■□ 3.57
MSX2-202ENST00000507785 ASAP1Q9ULH1 1129 aa37.33■■■■□ 3.57
MSX2-202ENST00000507785 TAF1LQ8IZX4 1826 aa37.32■■■■□ 3.56
MSX2-202ENST00000507785 CCNL1Q9UK58 526 aaPredicted RBP37.32■■■■□ 3.56
MSX2-202ENST00000507785 MRC1P22897 1456 aa37.32■■■■□ 3.56
MSX2-202ENST00000507785 CABP4P57796 275 aa37.31■■■■□ 3.56
MSX2-202ENST00000507785 LGR6Q9HBX8 967 aa37.31■■■■□ 3.56
MSX2-202ENST00000507785 ATG3Q9NT62 314 aa37.31■■■■□ 3.56
MSX2-202ENST00000507785 STK32BQ9NY57 414 aa37.31■■■■□ 3.56
MSX2-202ENST00000507785 RNMTO43148 476 aaKnown RBP37.3■■■■□ 3.56
MSX2-202ENST00000507785 SLC15A2Q16348 729 aa37.3■■■■□ 3.56
MSX2-202ENST00000507785 MAP3K5Q99683 1374 aa37.29■■■■□ 3.56
MSX2-202ENST00000507785 C5P01031 1676 aa37.28■■■■□ 3.56
MSX2-202ENST00000507785 CASZ1Q86V15 1759 aa37.27■■■■□ 3.56
MSX2-202ENST00000507785 ZNF827Q17R98 1081 aa37.27■■■■□ 3.56
MSX2-202ENST00000507785 AKT1S1Q96B36 256 aa37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms