RNA–Protein interactions for RNA: ENST00000507522.1

SDHA-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 644 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-208ENST00000507522 NHSQ6T4R5 1651 aa16.62■□□□□ 0.25
SDHA-208ENST00000507522 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
SDHA-208ENST00000507522 IL13P35225 146 aa16.61■□□□□ 0.25
SDHA-208ENST00000507522 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
SDHA-208ENST00000507522 RGPD3A6NKT7 1758 aaPredicted RBP16.6■□□□□ 0.25
SDHA-208ENST00000507522 RGPD4Q7Z3J3 1758 aa16.6■□□□□ 0.25
SDHA-208ENST00000507522 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
SDHA-208ENST00000507522 TATP17735 454 aaPredicted RBP16.59■□□□□ 0.25
SDHA-208ENST00000507522 BAG6P46379 1132 aa16.59■□□□□ 0.25
SDHA-208ENST00000507522 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
SDHA-208ENST00000507522 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
SDHA-208ENST00000507522 KDRP35968 1356 aa16.59■□□□□ 0.25
SDHA-208ENST00000507522 TRIM37O94972 964 aa16.58■□□□□ 0.24
SDHA-208ENST00000507522 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
SDHA-208ENST00000507522 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
SDHA-208ENST00000507522 RREB1Q92766 1687 aa16.56■□□□□ 0.24
SDHA-208ENST00000507522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.24
SDHA-208ENST00000507522 BTAF1O14981 1849 aa16.55■□□□□ 0.24
SDHA-208ENST00000507522 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
SDHA-208ENST00000507522 EN1Q05925 392 aaPredicted RBP16.55■□□□□ 0.24
SDHA-208ENST00000507522 TOGARAM1Q9Y4F4 1720 aa16.55■□□□□ 0.24
SDHA-208ENST00000507522 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
SDHA-208ENST00000507522 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
SDHA-208ENST00000507522 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
SDHA-208ENST00000507522 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
SDHA-208ENST00000507522 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
SDHA-208ENST00000507522 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
SDHA-208ENST00000507522 CYP27B1O15528 508 aa16.53■□□□□ 0.24
SDHA-208ENST00000507522 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
SDHA-208ENST00000507522 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
SDHA-208ENST00000507522 ITGB4P16144 1822 aa16.52■□□□□ 0.24
SDHA-208ENST00000507522 R3HDM1Q15032 1099 aaKnown RBP16.52■□□□□ 0.24
SDHA-208ENST00000507522 RALBP1Q15311 655 aa16.52■□□□□ 0.24
SDHA-208ENST00000507522 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
SDHA-208ENST00000507522 SPG7Q9UQ90 795 aa16.52■□□□□ 0.24
SDHA-208ENST00000507522 APBA3O96018 575 aa16.51■□□□□ 0.23
SDHA-208ENST00000507522 CFAP53Q96M91 514 aa16.51■□□□□ 0.23
SDHA-208ENST00000507522 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
SDHA-208ENST00000507522 KCNQ2O43526 872 aa16.5■□□□□ 0.23
SDHA-208ENST00000507522 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
SDHA-208ENST00000507522 PLSCR1O15162 318 aa16.49■□□□□ 0.23
SDHA-208ENST00000507522 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
SDHA-208ENST00000507522 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
SDHA-208ENST00000507522 PHKG2P15735 406 aa16.48■□□□□ 0.23
SDHA-208ENST00000507522 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
SDHA-208ENST00000507522 LY75O60449 1722 aa16.48■□□□□ 0.23
SDHA-208ENST00000507522 HMOX1P09601 288 aa16.47■□□□□ 0.23
SDHA-208ENST00000507522 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
SDHA-208ENST00000507522 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
SDHA-208ENST00000507522 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
SDHA-208ENST00000507522 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
SDHA-208ENST00000507522 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
SDHA-208ENST00000507522 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.23
SDHA-208ENST00000507522 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
SDHA-208ENST00000507522 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
SDHA-208ENST00000507522 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
SDHA-208ENST00000507522 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
SDHA-208ENST00000507522 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
SDHA-208ENST00000507522 KDM6AO15550 1401 aaPredicted RBP16.44■□□□□ 0.22
SDHA-208ENST00000507522 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
SDHA-208ENST00000507522 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
SDHA-208ENST00000507522 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
SDHA-208ENST00000507522 PROM2Q8N271 834 aa16.42■□□□□ 0.22
SDHA-208ENST00000507522 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
SDHA-208ENST00000507522 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
SDHA-208ENST00000507522 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
SDHA-208ENST00000507522 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
SDHA-208ENST00000507522 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
SDHA-208ENST00000507522 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
SDHA-208ENST00000507522 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
SDHA-208ENST00000507522 FCHSD2O94868 740 aa16.39■□□□□ 0.21
SDHA-208ENST00000507522 PRKAR2BP31323 418 aa16.39■□□□□ 0.21
SDHA-208ENST00000507522 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
SDHA-208ENST00000507522 MRC1P22897 1456 aa16.39■□□□□ 0.21
SDHA-208ENST00000507522 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
SDHA-208ENST00000507522 PIGBQ92521 554 aa16.38■□□□□ 0.21
SDHA-208ENST00000507522 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
SDHA-208ENST00000507522 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
SDHA-208ENST00000507522 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
SDHA-208ENST00000507522 SIPA1L3O60292 1781 aaPredicted RBP16.37■□□□□ 0.21
SDHA-208ENST00000507522 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
SDHA-208ENST00000507522 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
SDHA-208ENST00000507522 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
SDHA-208ENST00000507522 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
SDHA-208ENST00000507522 QSER1Q2KHR3 1735 aa16.36■□□□□ 0.21
SDHA-208ENST00000507522 C5P01031 1676 aa16.35■□□□□ 0.21
SDHA-208ENST00000507522 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
SDHA-208ENST00000507522 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
SDHA-208ENST00000507522 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
SDHA-208ENST00000507522 YY1P25490 414 aa16.34■□□□□ 0.21
SDHA-208ENST00000507522 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
SDHA-208ENST00000507522 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
SDHA-208ENST00000507522 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
SDHA-208ENST00000507522 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
SDHA-208ENST00000507522 CASZ1Q86V15 1759 aa16.33■□□□□ 0.21
SDHA-208ENST00000507522 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
SDHA-208ENST00000507522 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
SDHA-208ENST00000507522 NBPF14Q5TI25 921 aa16.33■□□□□ 0.2
SDHA-208ENST00000507522 SMARCC1Q92922 1105 aaPredicted RBP16.33■□□□□ 0.2
SDHA-208ENST00000507522 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms