RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 PARD3Q8TEW0 1356 aa11.8□□□□□ -0.52
CTSB-205ENST00000505496 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
CTSB-205ENST00000505496 TNS1Q9HBL0 1735 aaKnown RBP11.8□□□□□ -0.52
CTSB-205ENST00000505496 PLSCR1O15162 318 aa11.8□□□□□ -0.52
CTSB-205ENST00000505496 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
CTSB-205ENST00000505496 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
CTSB-205ENST00000505496 CYP27B1O15528 508 aa11.79□□□□□ -0.52
CTSB-205ENST00000505496 APBA3O96018 575 aa11.79□□□□□ -0.52
CTSB-205ENST00000505496 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
CTSB-205ENST00000505496 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
CTSB-205ENST00000505496 DDX54Q8TDD1 881 aaKnown RBP11.79□□□□□ -0.52
CTSB-205ENST00000505496 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
CTSB-205ENST00000505496 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
CTSB-205ENST00000505496 KCNQ2O43526 872 aa11.78□□□□□ -0.52
CTSB-205ENST00000505496 DDX10Q13206 875 aaKnown RBP11.78□□□□□ -0.52
CTSB-205ENST00000505496 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
CTSB-205ENST00000505496 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.52
CTSB-205ENST00000505496 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
CTSB-205ENST00000505496 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
CTSB-205ENST00000505496 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
CTSB-205ENST00000505496 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
CTSB-205ENST00000505496 PKD1L3Q7Z443 1732 aa11.77□□□□□ -0.53
CTSB-205ENST00000505496 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.53
CTSB-205ENST00000505496 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
CTSB-205ENST00000505496 SULT6B1Q6IMI4 303 aa11.76□□□□□ -0.53
CTSB-205ENST00000505496 ACSBG1Q96GR2 724 aa11.76□□□□□ -0.53
CTSB-205ENST00000505496 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
CTSB-205ENST00000505496 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
CTSB-205ENST00000505496 RALBP1Q15311 655 aa11.75□□□□□ -0.53
CTSB-205ENST00000505496 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
CTSB-205ENST00000505496 PROM2Q8N271 834 aa11.75□□□□□ -0.53
CTSB-205ENST00000505496 PHKG2P15735 406 aa11.74□□□□□ -0.53
CTSB-205ENST00000505496 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
CTSB-205ENST00000505496 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
CTSB-205ENST00000505496 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
CTSB-205ENST00000505496 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
CTSB-205ENST00000505496 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
CTSB-205ENST00000505496 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
CTSB-205ENST00000505496 CFAP53Q96M91 514 aa11.73□□□□□ -0.53
CTSB-205ENST00000505496 RREB1Q92766 1687 aa11.71□□□□□ -0.54
CTSB-205ENST00000505496 HSP90AB1P08238 724 aaKnown RBP11.7□□□□□ -0.54
CTSB-205ENST00000505496 HMOX1P09601 288 aa11.7□□□□□ -0.54
CTSB-205ENST00000505496 TXNRD1Q16881 649 aa11.7□□□□□ -0.54
CTSB-205ENST00000505496 ZNF530Q6P9A1 599 aaPredicted RBP11.7□□□□□ -0.54
CTSB-205ENST00000505496 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
CTSB-205ENST00000505496 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
CTSB-205ENST00000505496 ERVV-2B6SEH9 535 aa11.69□□□□□ -0.54
CTSB-205ENST00000505496 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
CTSB-205ENST00000505496 PIGBQ92521 554 aa11.69□□□□□ -0.54
CTSB-205ENST00000505496 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
CTSB-205ENST00000505496 RSPH6AQ9H0K4 717 aa11.69□□□□□ -0.54
CTSB-205ENST00000505496 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
CTSB-205ENST00000505496 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
CTSB-205ENST00000505496 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
CTSB-205ENST00000505496 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
CTSB-205ENST00000505496 BTAF1O14981 1849 aa11.68□□□□□ -0.54
CTSB-205ENST00000505496 FCHSD2O94868 740 aa11.68□□□□□ -0.54
CTSB-205ENST00000505496 MTHFSDQ2M296 383 aaKnown RBP11.68□□□□□ -0.54
CTSB-205ENST00000505496 AKAP4Q5JQC9 854 aa11.68□□□□□ -0.54
CTSB-205ENST00000505496 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
CTSB-205ENST00000505496 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
CTSB-205ENST00000505496 TOGARAM1Q9Y4F4 1720 aa11.68□□□□□ -0.54
CTSB-205ENST00000505496 NUP188Q5SRE5 1749 aa11.67□□□□□ -0.54
CTSB-205ENST00000505496 C1orf141Q5JVX7 400 aa11.67□□□□□ -0.54
CTSB-205ENST00000505496 MPRIPQ6WCQ1 1025 aa11.67□□□□□ -0.54
CTSB-205ENST00000505496 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
CTSB-205ENST00000505496 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTSB-205ENST00000505496 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
CTSB-205ENST00000505496 ANO8Q9HCE9 1232 aaPredicted RBP11.66□□□□□ -0.54
CTSB-205ENST00000505496 PAPPAQ13219 1627 aa11.65□□□□□ -0.54
CTSB-205ENST00000505496 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
CTSB-205ENST00000505496 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
CTSB-205ENST00000505496 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
CTSB-205ENST00000505496 SMARCC1Q92922 1105 aaPredicted RBP11.65□□□□□ -0.54
CTSB-205ENST00000505496 PHACTR3Q96KR7 559 aa11.65□□□□□ -0.54
CTSB-205ENST00000505496 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
CTSB-205ENST00000505496 PALLDQ8WX93 1383 aa11.65□□□□□ -0.55
CTSB-205ENST00000505496 AKT1S1Q96B36 256 aa11.64□□□□□ -0.55
CTSB-205ENST00000505496 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
CTSB-205ENST00000505496 MRC1P22897 1456 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 ADAMTS7Q9UKP4 1686 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
CTSB-205ENST00000505496 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
CTSB-205ENST00000505496 SLC15A2Q16348 729 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
CTSB-205ENST00000505496 ASAP1Q9ULH1 1129 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 LY75O60449 1722 aa11.63□□□□□ -0.55
CTSB-205ENST00000505496 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
CTSB-205ENST00000505496 CABP4P57796 275 aa11.62□□□□□ -0.55
CTSB-205ENST00000505496 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
CTSB-205ENST00000505496 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
CTSB-205ENST00000505496 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
CTSB-205ENST00000505496 CEMIPQ8WUJ3 1361 aa11.62□□□□□ -0.55
CTSB-205ENST00000505496 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
CTSB-205ENST00000505496 ITGB4P16144 1822 aa11.61□□□□□ -0.55
CTSB-205ENST00000505496 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
CTSB-205ENST00000505496 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
CTSB-205ENST00000505496 SIK1P57059 783 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms