RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 PLSCR1O15162 318 aa12.85□□□□□ -0.35
SIL1-206ENST00000505353 PROM2Q8N271 834 aa12.85□□□□□ -0.35
SIL1-206ENST00000505353 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
SIL1-206ENST00000505353 KDRP35968 1356 aa12.84□□□□□ -0.35
SIL1-206ENST00000505353 CYP27B1O15528 508 aa12.84□□□□□ -0.35
SIL1-206ENST00000505353 APBA3O96018 575 aa12.84□□□□□ -0.35
SIL1-206ENST00000505353 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
SIL1-206ENST00000505353 BAG6P46379 1132 aa12.84□□□□□ -0.35
SIL1-206ENST00000505353 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
SIL1-206ENST00000505353 EZH2Q15910 746 aaKnown RBP12.84□□□□□ -0.35
SIL1-206ENST00000505353 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
SIL1-206ENST00000505353 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
SIL1-206ENST00000505353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
SIL1-206ENST00000505353 PKD1L3Q7Z443 1732 aa12.83□□□□□ -0.36
SIL1-206ENST00000505353 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
SIL1-206ENST00000505353 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
SIL1-206ENST00000505353 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
SIL1-206ENST00000505353 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
SIL1-206ENST00000505353 NHSQ6T4R5 1651 aa12.81□□□□□ -0.36
SIL1-206ENST00000505353 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
SIL1-206ENST00000505353 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
SIL1-206ENST00000505353 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
SIL1-206ENST00000505353 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
SIL1-206ENST00000505353 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
SIL1-206ENST00000505353 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
SIL1-206ENST00000505353 CNGB1Q14028 1251 aaPredicted RBP12.79□□□□□ -0.36
SIL1-206ENST00000505353 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
SIL1-206ENST00000505353 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
SIL1-206ENST00000505353 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
SIL1-206ENST00000505353 RREB1Q92766 1687 aa12.79□□□□□ -0.36
SIL1-206ENST00000505353 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
SIL1-206ENST00000505353 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
SIL1-206ENST00000505353 PHKG2P15735 406 aa12.78□□□□□ -0.36
SIL1-206ENST00000505353 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
SIL1-206ENST00000505353 BTAF1O14981 1849 aa12.77□□□□□ -0.37
SIL1-206ENST00000505353 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
SIL1-206ENST00000505353 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
SIL1-206ENST00000505353 TXNRD1Q16881 649 aa12.76□□□□□ -0.37
SIL1-206ENST00000505353 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
SIL1-206ENST00000505353 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
SIL1-206ENST00000505353 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
SIL1-206ENST00000505353 LRRC4BQ9NT99 713 aa12.75□□□□□ -0.37
SIL1-206ENST00000505353 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
SIL1-206ENST00000505353 HMOX1P09601 288 aa12.74□□□□□ -0.37
SIL1-206ENST00000505353 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
SIL1-206ENST00000505353 ITGB4P16144 1822 aa12.74□□□□□ -0.37
SIL1-206ENST00000505353 RALBP1Q15311 655 aa12.73□□□□□ -0.37
SIL1-206ENST00000505353 PIGBQ92521 554 aa12.73□□□□□ -0.37
SIL1-206ENST00000505353 ANO8Q9HCE9 1232 aaPredicted RBP12.73□□□□□ -0.37
SIL1-206ENST00000505353 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
SIL1-206ENST00000505353 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
SIL1-206ENST00000505353 LY75O60449 1722 aa12.71□□□□□ -0.37
SIL1-206ENST00000505353 PAPPAQ13219 1627 aa12.71□□□□□ -0.37
SIL1-206ENST00000505353 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
SIL1-206ENST00000505353 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
SIL1-206ENST00000505353 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
SIL1-206ENST00000505353 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
SIL1-206ENST00000505353 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
SIL1-206ENST00000505353 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
SIL1-206ENST00000505353 MPRIPQ6WCQ1 1025 aa12.7□□□□□ -0.38
SIL1-206ENST00000505353 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
SIL1-206ENST00000505353 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
SIL1-206ENST00000505353 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
SIL1-206ENST00000505353 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
SIL1-206ENST00000505353 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
SIL1-206ENST00000505353 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
SIL1-206ENST00000505353 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
SIL1-206ENST00000505353 LGR6Q9HBX8 967 aa12.69□□□□□ -0.38
SIL1-206ENST00000505353 ADAMTS7Q9UKP4 1686 aa12.69□□□□□ -0.38
SIL1-206ENST00000505353 FCHSD2O94868 740 aa12.68□□□□□ -0.38
SIL1-206ENST00000505353 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
SIL1-206ENST00000505353 KCNQ4P56696 695 aa12.68□□□□□ -0.38
SIL1-206ENST00000505353 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
SIL1-206ENST00000505353 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
SIL1-206ENST00000505353 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
SIL1-206ENST00000505353 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
SIL1-206ENST00000505353 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
SIL1-206ENST00000505353 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
SIL1-206ENST00000505353 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
SIL1-206ENST00000505353 PLEKHF1Q96S99 279 aa12.67□□□□□ -0.38
SIL1-206ENST00000505353 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
SIL1-206ENST00000505353 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
SIL1-206ENST00000505353 MYBBP1AQ9BQG0 1328 aaKnown RBP12.66□□□□□ -0.38
SIL1-206ENST00000505353 RNMTO43148 476 aaKnown RBP12.66□□□□□ -0.38
SIL1-206ENST00000505353 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
SIL1-206ENST00000505353 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
SIL1-206ENST00000505353 ZNF827Q17R98 1081 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 C1orf141Q5JVX7 400 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 SLC4A9Q96Q91 983 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
SIL1-206ENST00000505353 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
SIL1-206ENST00000505353 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
SIL1-206ENST00000505353 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
SIL1-206ENST00000505353 CCNL1Q9UK58 526 aaPredicted RBP12.64□□□□□ -0.39
SIL1-206ENST00000505353 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
SIL1-206ENST00000505353 MRC1P22897 1456 aa12.64□□□□□ -0.39
SIL1-206ENST00000505353 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms