RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
UBE3D-206ENST00000505226 GPT2Q8TD30 523 aa14.66□□□□□ -0.06
UBE3D-206ENST00000505226 RBSNQ9H1K0 784 aa14.66□□□□□ -0.06
UBE3D-206ENST00000505226 NCLP19338 710 aaKnown RBP14.66□□□□□ -0.06
UBE3D-206ENST00000505226 RBM27Q9P2N5 1060 aaKnown RBP14.66□□□□□ -0.06
UBE3D-206ENST00000505226 MSH6P52701 1360 aa14.66□□□□□ -0.06
UBE3D-206ENST00000505226 RTL1A6NKG5 1358 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 AATKQ6ZMQ8 1374 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 MCM10Q7L590 875 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 RIMBP3CA6NJZ7 1639 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 RIMBP3BA6NNM3 1639 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 RIMBP3Q9UFD9 1639 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-206ENST00000505226 NUCB2P80303 420 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 LMOD3Q0VAK6 560 aa14.65□□□□□ -0.06
UBE3D-206ENST00000505226 NSFL1CQ9UNZ2 370 aaKnown RBP14.65□□□□□ -0.06
UBE3D-206ENST00000505226 RRP9O43818 475 aaKnown RBP14.64□□□□□ -0.07
UBE3D-206ENST00000505226 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
UBE3D-206ENST00000505226 PRIM1P49642 420 aaKnown RBP14.64□□□□□ -0.07
UBE3D-206ENST00000505226 ZSCAN30Q86W11 494 aa14.64□□□□□ -0.07
UBE3D-206ENST00000505226 SETD1AO15047 1707 aaKnown RBP14.64□□□□□ -0.07
UBE3D-206ENST00000505226 RPAP2Q8IXW5 612 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-206ENST00000505226 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
UBE3D-206ENST00000505226 CHL1O00533 1208 aa14.63□□□□□ -0.07
UBE3D-206ENST00000505226 COG3Q96JB2 828 aa14.63□□□□□ -0.07
UBE3D-206ENST00000505226 NUDT16Q96DE0 195 aaKnown RBP14.63□□□□□ -0.07
UBE3D-206ENST00000505226 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.63□□□□□ -0.07
UBE3D-206ENST00000505226 SULT6B1Q6IMI4 303 aa14.62□□□□□ -0.07
UBE3D-206ENST00000505226 KIAA1211Q6ZU35 1233 aa14.62□□□□□ -0.07
UBE3D-206ENST00000505226 TXNDC2Q86VQ3 553 aa14.62□□□□□ -0.07
UBE3D-206ENST00000505226 EIF4A2Q14240 407 aaKnown RBP14.62□□□□□ -0.07
UBE3D-206ENST00000505226 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
UBE3D-206ENST00000505226 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
UBE3D-206ENST00000505226 METP08581 1390 aa14.61□□□□□ -0.07
UBE3D-206ENST00000505226 A2ML1A8K2U0 1454 aa14.61□□□□□ -0.07
UBE3D-206ENST00000505226 FOXD4L5Q5VV16 416 aaPredicted RBP14.61□□□□□ -0.07
UBE3D-206ENST00000505226 FOXD4L4Q8WXT5 416 aaPredicted RBP14.61□□□□□ -0.07
UBE3D-206ENST00000505226 TMEM63CQ9P1W3 806 aa14.61□□□□□ -0.07
UBE3D-206ENST00000505226 G2E3Q7L622 706 aa14.6□□□□□ -0.07
UBE3D-206ENST00000505226 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
UBE3D-206ENST00000505226 F6X3S4 739 aa14.6□□□□□ -0.07
UBE3D-206ENST00000505226 OFD1O75665 1012 aa14.6□□□□□ -0.07
UBE3D-206ENST00000505226 PDLIM2Q96JY6 352 aa14.6□□□□□ -0.07
UBE3D-206ENST00000505226 ST18O60284 1047 aa14.59□□□□□ -0.07
UBE3D-206ENST00000505226 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
UBE3D-206ENST00000505226 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
UBE3D-206ENST00000505226 ERC2O15083 957 aa14.58□□□□□ -0.07
UBE3D-206ENST00000505226 PDE1AP54750 535 aa14.58□□□□□ -0.07
UBE3D-206ENST00000505226 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.07
UBE3D-206ENST00000505226 MON2Q7Z3U7 1717 aa14.58□□□□□ -0.08
UBE3D-206ENST00000505226 ANP32BQ92688 251 aaKnown RBP14.58□□□□□ -0.08
UBE3D-206ENST00000505226 TPM2P07951 284 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 C3P01024 1663 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 NRXN3Q9Y4C0 1643 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 PTPRCP08575 1304 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 SYCE3A1L190 88 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 FOXO3O43524 673 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 REC8O95072 547 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 HSP90AB2PQ58FF8 381 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 TMX3Q96JJ7 454 aa14.57□□□□□ -0.08
UBE3D-206ENST00000505226 NEK4P51957 841 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 OSBPL3Q9H4L5 887 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 CRB1P82279 1406 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
UBE3D-206ENST00000505226 EXOC6BQ9Y2D4 811 aa14.56□□□□□ -0.08
UBE3D-206ENST00000505226 MSNP26038 577 aaKnown RBP14.56□□□□□ -0.08
UBE3D-206ENST00000505226 NRKQ7Z2Y5 1582 aa14.55□□□□□ -0.08
UBE3D-206ENST00000505226 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
UBE3D-206ENST00000505226 XPCQ01831 940 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-206ENST00000505226 LRSAM1Q6UWE0 723 aa14.54□□□□□ -0.08
UBE3D-206ENST00000505226 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.54□□□□□ -0.08
UBE3D-206ENST00000505226 AKAP12Q02952 1782 aa14.53□□□□□ -0.08
UBE3D-206ENST00000505226 HS1BP3Q53T59 392 aa14.53□□□□□ -0.08
UBE3D-206ENST00000505226 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
UBE3D-206ENST00000505226 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
UBE3D-206ENST00000505226 ZMYND15Q9H091 742 aa14.53□□□□□ -0.08
UBE3D-206ENST00000505226 ZNF500O60304 480 aaPredicted RBP14.53□□□□□ -0.08
UBE3D-206ENST00000505226 BRD1O95696 1058 aa14.53□□□□□ -0.08
UBE3D-206ENST00000505226 ESYT1Q9BSJ8 1104 aa14.53□□□□□ -0.08
UBE3D-206ENST00000505226 PNMA6EA0A0J9YXQ4 647 aa14.52□□□□□ -0.08
UBE3D-206ENST00000505226 GLIPR1L2Q4G1C9 344 aa14.52□□□□□ -0.08
UBE3D-206ENST00000505226 RNF214Q8ND24 703 aa14.52□□□□□ -0.08
UBE3D-206ENST00000505226 IL25Q9H293 177 aa14.52□□□□□ -0.08
UBE3D-206ENST00000505226 R3HCC1Q9Y3T6 440 aaKnown RBP14.52□□□□□ -0.08
UBE3D-206ENST00000505226 TUBGCP6Q96RT7 1819 aa14.52□□□□□ -0.09
UBE3D-206ENST00000505226 NUTM2FA1L443 756 aa14.52□□□□□ -0.09
UBE3D-206ENST00000505226 SOX12O15370 315 aa14.52□□□□□ -0.09
UBE3D-206ENST00000505226 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
UBE3D-206ENST00000505226 RBM10P98175 930 aaKnown RBP14.51□□□□□ -0.09
UBE3D-206ENST00000505226 CUL4AQ13619 759 aa14.51□□□□□ -0.09
UBE3D-206ENST00000505226 TTC21BQ7Z4L5 1316 aa14.51□□□□□ -0.09
UBE3D-206ENST00000505226 MTHFSDQ2M296 383 aaKnown RBP14.51□□□□□ -0.09
UBE3D-206ENST00000505226 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms