RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 BCL11BQ9C0K0 894 aaPredicted RBP27.93■■■□□ 2.06
DDR1-255ENST00000504927 IGSF1Q8N6C5 1336 aa27.92■■■□□ 2.06
DDR1-255ENST00000504927 MEGF6O75095 1541 aa27.92■■■□□ 2.06
DDR1-255ENST00000504927 SRCAPQ6ZRS2 3230 aa27.92■■■□□ 2.06
DDR1-255ENST00000504927 APBA3O96018 575 aa27.92■■■□□ 2.06
DDR1-255ENST00000504927 PTF1AQ7RTS3 328 aa27.9■■■□□ 2.06
DDR1-255ENST00000504927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.9■■■□□ 2.06
DDR1-255ENST00000504927 DIAPH1O60610 1272 aaKnown RBP27.89■■■□□ 2.06
DDR1-255ENST00000504927 SPG7Q9UQ90 795 aa27.89■■■□□ 2.06
DDR1-255ENST00000504927 PLEKHG2Q9H7P9 1386 aa27.88■■■□□ 2.05
DDR1-255ENST00000504927 SHANK3Q9BYB0 1731 aa27.87■■■□□ 2.05
DDR1-255ENST00000504927 PCDH11XQ9BZA7 1347 aa27.87■■■□□ 2.05
DDR1-255ENST00000504927 PCDH11YQ9BZA8 1340 aa27.87■■■□□ 2.05
DDR1-255ENST00000504927 PPP2R1AP30153 589 aa27.86■■■□□ 2.05
DDR1-255ENST00000504927 EZH2Q15910 746 aaKnown RBP27.86■■■□□ 2.05
DDR1-255ENST00000504927 CFAP53Q96M91 514 aa27.86■■■□□ 2.05
DDR1-255ENST00000504927 CAMKK2Q96RR4 588 aa27.85■■■□□ 2.05
DDR1-255ENST00000504927 PLSCR1O15162 318 aa27.84■■■□□ 2.05
DDR1-255ENST00000504927 RREB1Q92766 1687 aa27.84■■■□□ 2.05
DDR1-255ENST00000504927 PARD3Q8TEW0 1356 aa27.84■■■□□ 2.05
DDR1-255ENST00000504927 SULT6B1Q6IMI4 303 aa27.83■■■□□ 2.05
DDR1-255ENST00000504927 ACSBG1Q96GR2 724 aa27.82■■■□□ 2.04
DDR1-255ENST00000504927 ZNF316A6NFI3 1004 aaPredicted RBP27.81■■■□□ 2.04
DDR1-255ENST00000504927 KCNQ2O43526 872 aa27.81■■■□□ 2.04
DDR1-255ENST00000504927 RALBP1Q15311 655 aa27.81■■■□□ 2.04
DDR1-255ENST00000504927 AMOTQ4VCS5 1084 aa27.81■■■□□ 2.04
DDR1-255ENST00000504927 NHSQ6T4R5 1651 aa27.81■■■□□ 2.04
DDR1-255ENST00000504927 CYP27B1O15528 508 aa27.8■■■□□ 2.04
DDR1-255ENST00000504927 PLEKHO1Q53GL0 409 aaPredicted RBP27.8■■■□□ 2.04
DDR1-255ENST00000504927 NUP188Q5SRE5 1749 aa27.8■■■□□ 2.04
DDR1-255ENST00000504927 KDRP35968 1356 aa27.79■■■□□ 2.04
DDR1-255ENST00000504927 NKX1-1Q15270 411 aaPredicted RBP27.78■■■□□ 2.04
DDR1-255ENST00000504927 AEBP1Q8IUX7 1158 aa27.78■■■□□ 2.04
DDR1-255ENST00000504927 IFNL2Q8IZJ0 200 aa27.78■■■□□ 2.04
DDR1-255ENST00000504927 NUDCQ9Y266 331 aa27.77■■■□□ 2.04
DDR1-255ENST00000504927 RGPD3A6NKT7 1758 aaPredicted RBP27.77■■■□□ 2.04
DDR1-255ENST00000504927 RGPD4Q7Z3J3 1758 aa27.77■■■□□ 2.04
DDR1-255ENST00000504927 PRIM1P49642 420 aaKnown RBP27.76■■■□□ 2.03
DDR1-255ENST00000504927 SYTL4Q96C24 671 aaPredicted RBP27.74■■■□□ 2.03
DDR1-255ENST00000504927 COL3A1P02461 1466 aaPredicted RBP27.74■■■□□ 2.03
DDR1-255ENST00000504927 PSDA5PKW4 1024 aaPredicted RBP27.73■■■□□ 2.03
DDR1-255ENST00000504927 U2SURPO15042 1029 aaKnown RBP27.73■■■□□ 2.03
DDR1-255ENST00000504927 PHKG2P15735 406 aa27.73■■■□□ 2.03
DDR1-255ENST00000504927 HSP90AB1P08238 724 aaKnown RBP27.72■■■□□ 2.03
DDR1-255ENST00000504927 HMOX1P09601 288 aa27.72■■■□□ 2.03
DDR1-255ENST00000504927 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
DDR1-255ENST00000504927 DOT1LQ8TEK3 1739 aa27.72■■■□□ 2.03
DDR1-255ENST00000504927 BTAF1O14981 1849 aa27.71■■■□□ 2.03
DDR1-255ENST00000504927 ZNF530Q6P9A1 599 aaPredicted RBP27.69■■■□□ 2.02
DDR1-255ENST00000504927 C1orf141Q5JVX7 400 aa27.68■■■□□ 2.02
DDR1-255ENST00000504927 NBPF14Q5TI25 921 aa27.68■■■□□ 2.02
DDR1-255ENST00000504927 KAT6BQ8WYB5 2073 aa27.68■■■□□ 2.02
DDR1-255ENST00000504927 R3HDM1Q15032 1099 aaKnown RBP27.67■■■□□ 2.02
DDR1-255ENST00000504927 PROM2Q8N271 834 aa27.67■■■□□ 2.02
DDR1-255ENST00000504927 DCAF5Q96JK2 942 aa27.67■■■□□ 2.02
DDR1-255ENST00000504927 TXNRD1Q16881 649 aa27.66■■■□□ 2.02
DDR1-255ENST00000504927 MYBBP1AQ9BQG0 1328 aaKnown RBP27.65■■■□□ 2.02
DDR1-255ENST00000504927 MPRIPQ6WCQ1 1025 aa27.64■■■□□ 2.02
DDR1-255ENST00000504927 ERVV-2B6SEH9 535 aa27.63■■■□□ 2.01
DDR1-255ENST00000504927 FCHSD2O94868 740 aa27.63■■■□□ 2.01
DDR1-255ENST00000504927 U2AF1L5P0DN76 240 aaPredicted RBP27.63■■■□□ 2.01
DDR1-255ENST00000504927 U2AF1Q01081 240 aaKnown RBP eCLIP27.63■■■□□ 2.01
DDR1-255ENST00000504927 TOGARAM1Q9Y4F4 1720 aa27.62■■■□□ 2.01
DDR1-255ENST00000504927 AKAP4Q5JQC9 854 aa27.62■■■□□ 2.01
DDR1-255ENST00000504927 PRKRIP1Q9H875 184 aaPredicted RBP27.62■■■□□ 2.01
DDR1-255ENST00000504927 SLC27A3Q5K4L6 730 aa27.61■■■□□ 2.01
DDR1-255ENST00000504927 ANO8Q9HCE9 1232 aaPredicted RBP27.61■■■□□ 2.01
DDR1-255ENST00000504927 TMOD3Q9NYL9 352 aa27.61■■■□□ 2.01
DDR1-255ENST00000504927 MTHFSDQ2M296 383 aaKnown RBP27.6■■■□□ 2.01
DDR1-255ENST00000504927 PIGBQ92521 554 aa27.6■■■□□ 2.01
DDR1-255ENST00000504927 HMGB2P26583 209 aaKnown RBP27.59■■■□□ 2.01
DDR1-255ENST00000504927 SMARCC1Q92922 1105 aaPredicted RBP27.59■■■□□ 2.01
DDR1-255ENST00000504927 RSPH6AQ9H0K4 717 aa27.59■■■□□ 2.01
DDR1-255ENST00000504927 PRKAR2BP31323 418 aa27.57■■■□□ 2
DDR1-255ENST00000504927 GAS2L2Q8NHY3 880 aa27.57■■■□□ 2
DDR1-255ENST00000504927 PAPPAQ13219 1627 aa27.56■■■□□ 2
DDR1-255ENST00000504927 CABP4P57796 275 aa27.55■■■□□ 2
DDR1-255ENST00000504927 PNNQ9H307 717 aaKnown RBP27.55■■■□□ 2
DDR1-255ENST00000504927 LRP5O75197 1615 aa27.53■■■□□ 2
DDR1-255ENST00000504927 NEFMP07197 916 aa27.52■■■□□ 2
DDR1-255ENST00000504927 PHACTR3Q96KR7 559 aa27.52■■■□□ 2
DDR1-255ENST00000504927 LRRC4BQ9NT99 713 aa27.52■■■□□ 2
DDR1-255ENST00000504927 STK32BQ9NY57 414 aa27.52■■■□□ 2
DDR1-255ENST00000504927 ITGB4P16144 1822 aa27.52■■■□□ 2
DDR1-255ENST00000504927 KDM6AO15550 1401 aaPredicted RBP27.51■■□□□ 1.99
DDR1-255ENST00000504927 LY75O60449 1722 aa27.51■■□□□ 1.99
DDR1-255ENST00000504927 CCNL1Q9UK58 526 aaPredicted RBP27.51■■□□□ 1.99
DDR1-255ENST00000504927 PALLDQ8WX93 1383 aa27.5■■□□□ 1.99
DDR1-255ENST00000504927 GNAT3A8MTJ3 354 aa27.49■■□□□ 1.99
DDR1-255ENST00000504927 RNMTO43148 476 aaKnown RBP27.49■■□□□ 1.99
DDR1-255ENST00000504927 SLC15A2Q16348 729 aa27.49■■□□□ 1.99
DDR1-255ENST00000504927 NFATC2IPQ8NCF5 419 aa27.49■■□□□ 1.99
DDR1-255ENST00000504927 LGR6Q9HBX8 967 aa27.49■■□□□ 1.99
DDR1-255ENST00000504927 KCNQ4P56696 695 aa27.48■■□□□ 1.99
DDR1-255ENST00000504927 ASAP1Q9ULH1 1129 aa27.48■■□□□ 1.99
DDR1-255ENST00000504927 CASZ1Q86V15 1759 aa27.48■■□□□ 1.99
DDR1-255ENST00000504927 ATG3Q9NT62 314 aa27.47■■□□□ 1.99
DDR1-255ENST00000504927 PDGFDQ9GZP0 370 aaPredicted RBP27.46■■□□□ 1.99
DDR1-255ENST00000504927 SLC52A2Q9HAB3 445 aa27.46■■□□□ 1.99
DDR1-255ENST00000504927 ANP32CO43423 234 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms