RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 CDK12Q9NYV4 1490 aaPredicted RBP12.07□□□□□ -0.48
CSF1R-203ENST00000504875 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
CSF1R-203ENST00000504875 HMMRO75330 724 aa12.07□□□□□ -0.48
CSF1R-203ENST00000504875 PLEKHG1Q9ULL1 1385 aa12.07□□□□□ -0.48
CSF1R-203ENST00000504875 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
CSF1R-203ENST00000504875 ADGRB2O60241 1585 aa12.07□□□□□ -0.48
CSF1R-203ENST00000504875 KIF20BQ96Q89 1820 aa12.06□□□□□ -0.48
CSF1R-203ENST00000504875 ZNF853P0CG23 659 aa12.06□□□□□ -0.48
CSF1R-203ENST00000504875 MEIS3Q99687 375 aa12.06□□□□□ -0.48
CSF1R-203ENST00000504875 TTC21AQ8NDW8 1320 aa12.06□□□□□ -0.48
CSF1R-203ENST00000504875 USP6P35125 1406 aa12.05□□□□□ -0.48
CSF1R-203ENST00000504875 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
CSF1R-203ENST00000504875 FLT4P35916 1363 aa12.05□□□□□ -0.48
CSF1R-203ENST00000504875 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
CSF1R-203ENST00000504875 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
CSF1R-203ENST00000504875 ADAMTS13Q76LX8 1427 aa12.04□□□□□ -0.48
CSF1R-203ENST00000504875 CHL1O00533 1208 aa12.04□□□□□ -0.48
CSF1R-203ENST00000504875 CDC45O75419 566 aa12.04□□□□□ -0.48
CSF1R-203ENST00000504875 TEFQ10587 303 aa12.04□□□□□ -0.48
CSF1R-203ENST00000504875 G2E3Q7L622 706 aa12.04□□□□□ -0.48
CSF1R-203ENST00000504875 CCDC30Q5VVM6 783 aa12.03□□□□□ -0.48
CSF1R-203ENST00000504875 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
CSF1R-203ENST00000504875 ABCC4O15439 1325 aa12.03□□□□□ -0.48
CSF1R-203ENST00000504875 TRIM6-TRIM34B2RNG4 842 aa12.03□□□□□ -0.48
CSF1R-203ENST00000504875 BMP2KLQ5H9B9 411 aa12.03□□□□□ -0.48
CSF1R-203ENST00000504875 EXOC6BQ9Y2D4 811 aa12.03□□□□□ -0.48
CSF1R-203ENST00000504875 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.48
CSF1R-203ENST00000504875 TBC1D9Q6ZT07 1266 aa12.02□□□□□ -0.48
CSF1R-203ENST00000504875 CHMP5Q9NZZ3 219 aa12.02□□□□□ -0.48
CSF1R-203ENST00000504875 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
CSF1R-203ENST00000504875 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.49
CSF1R-203ENST00000504875 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
CSF1R-203ENST00000504875 REREQ9P2R6 1566 aa12.02□□□□□ -0.49
CSF1R-203ENST00000504875 HOXC9P31274 260 aa12.01□□□□□ -0.49
CSF1R-203ENST00000504875 RILPL2Q969X0 211 aa12.01□□□□□ -0.49
CSF1R-203ENST00000504875 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
CSF1R-203ENST00000504875 ANKRD26Q9UPS8 1709 aa12.01□□□□□ -0.49
CSF1R-203ENST00000504875 MSH6P52701 1360 aa12.01□□□□□ -0.49
CSF1R-203ENST00000504875 GNAI2P04899 355 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
CSF1R-203ENST00000504875 PTPRCP08575 1304 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 PTPRUQ92729 1446 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
CSF1R-203ENST00000504875 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
CSF1R-203ENST00000504875 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 PIK3R4Q99570 1358 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 FLIIQ13045 1269 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
CSF1R-203ENST00000504875 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
CSF1R-203ENST00000504875 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
CSF1R-203ENST00000504875 TECPR2O15040 1411 aa11.99□□□□□ -0.49
CSF1R-203ENST00000504875 TSHZ3Q63HK5 1081 aa11.99□□□□□ -0.49
CSF1R-203ENST00000504875 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
CSF1R-203ENST00000504875 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
CSF1R-203ENST00000504875 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
CSF1R-203ENST00000504875 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
CSF1R-203ENST00000504875 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
CSF1R-203ENST00000504875 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
CSF1R-203ENST00000504875 PROSER2Q86WR7 435 aaPredicted RBP11.99□□□□□ -0.49
CSF1R-203ENST00000504875 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
CSF1R-203ENST00000504875 UBTFL1P0CB47 393 aaPredicted RBP11.98□□□□□ -0.49
CSF1R-203ENST00000504875 DCTPP1Q9H773 170 aa11.98□□□□□ -0.49
CSF1R-203ENST00000504875 ANXA1P04083 346 aa11.98□□□□□ -0.49
CSF1R-203ENST00000504875 NCLP19338 710 aaKnown RBP11.98□□□□□ -0.49
CSF1R-203ENST00000504875 GNAI3P08754 354 aa11.98□□□□□ -0.49
CSF1R-203ENST00000504875 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
CSF1R-203ENST00000504875 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
CSF1R-203ENST00000504875 RRAGDQ9NQL2 400 aaPredicted RBP11.98□□□□□ -0.49
CSF1R-203ENST00000504875 PTCH1Q13635 1447 aa11.98□□□□□ -0.49
CSF1R-203ENST00000504875 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
CSF1R-203ENST00000504875 ZC3H6P61129 1189 aaKnown RBP11.97□□□□□ -0.49
CSF1R-203ENST00000504875 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 NRXN3Q9Y4C0 1643 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 OVOS2A0A0J9YW53 1432 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 OVOS2Q6IE36 1432 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 TTC22Q5TAA0 569 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 ARID3AQ99856 593 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 IL1RAPL2Q9NP60 686 aa11.96□□□□□ -0.49
CSF1R-203ENST00000504875 GOLGA6L22H0YM25 854 aa11.96□□□□□ -0.5
CSF1R-203ENST00000504875 LRRFIP2Q9Y608 721 aaKnown RBP11.96□□□□□ -0.5
CSF1R-203ENST00000504875 GBP4Q96PP9 640 aa11.96□□□□□ -0.5
CSF1R-203ENST00000504875 ORAI2Q96SN7 254 aa11.96□□□□□ -0.5
CSF1R-203ENST00000504875 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
CSF1R-203ENST00000504875 MCM4P33991 863 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 AIMP1Q12904 312 aaKnown RBP11.95□□□□□ -0.5
CSF1R-203ENST00000504875 PLEKHO1Q53GL0 409 aaPredicted RBP11.95□□□□□ -0.5
CSF1R-203ENST00000504875 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
CSF1R-203ENST00000504875 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
CSF1R-203ENST00000504875 NLRP2Q9NX02 1062 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 SDSP20132 328 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 KIAA0232Q92628 1395 aa11.95□□□□□ -0.5
CSF1R-203ENST00000504875 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
CSF1R-203ENST00000504875 REC8O95072 547 aa11.94□□□□□ -0.5
CSF1R-203ENST00000504875 GSPT1P15170 499 aaKnown RBP11.94□□□□□ -0.5
CSF1R-203ENST00000504875 PHAXQ9H814 394 aaKnown RBP11.94□□□□□ -0.5
CSF1R-203ENST00000504875 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms