RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 NNTQ13423 1086 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 ZNF784Q8NCA9 323 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 STK32AQ8WU08 396 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 TOR4AQ9NXH8 423 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 KIAA1024Q9UPX6 916 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 PCDHGA11Q9Y5H2 935 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 LILRA1O75019 489 aa10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 ATP1A2P50993 1020 aa10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 CYLDQ9NQC7 956 aa10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 DNAAF2Q9NVR5 837 aaKnown RBP10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 NOVA2Q9UNW9 492 aaKnown RBP10.38□□□□□ -0.75
TRAPPC13-206ENST00000504751 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 J3QL48 77 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 RGS20O76081 388 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 DKK1O94907 266 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 MYCP01106 439 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 CSB-PGBD3P0DP91 1061 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 CC2D2BQ6DHV5 1058 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
TRAPPC13-206ENST00000504751 ZBTB7BO15156 539 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 CYP4X1Q8N118 509 aa10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 SIX5Q8N196 739 aa10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 OSBPL3Q9H4L5 887 aa10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
TRAPPC13-206ENST00000504751 TTC24A2A3L6 582 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC13-206ENST00000504751 SMPD1P17405 629 aa10.35□□□□□ -0.75
TRAPPC13-206ENST00000504751 TMEM164Q5U3C3 297 aa10.35□□□□□ -0.75
TRAPPC13-206ENST00000504751 ANKMY2Q8IV38 441 aa10.35□□□□□ -0.75
TRAPPC13-206ENST00000504751 KLF16Q9BXK1 252 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC13-206ENST00000504751 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
TRAPPC13-206ENST00000504751 MYT1Q01538 1121 aa10.34□□□□□ -0.75
TRAPPC13-206ENST00000504751 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
TRAPPC13-206ENST00000504751 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
TRAPPC13-206ENST00000504751 DPYDQ12882 1025 aa10.33□□□□□ -0.76
TRAPPC13-206ENST00000504751 TPCN2Q8NHX9 752 aa10.33□□□□□ -0.76
TRAPPC13-206ENST00000504751 PSME1Q06323 249 aa10.32□□□□□ -0.76
TRAPPC13-206ENST00000504751 CCDC102BQ68D86 513 aa10.32□□□□□ -0.76
TRAPPC13-206ENST00000504751 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
TRAPPC13-206ENST00000504751 ADD1P35611 737 aaKnown RBP10.31□□□□□ -0.76
TRAPPC13-206ENST00000504751 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
TRAPPC13-206ENST00000504751 FAM200AQ8TCP9 573 aa10.31□□□□□ -0.76
TRAPPC13-206ENST00000504751 ITPKCQ96DU7 683 aa10.31□□□□□ -0.76
TRAPPC13-206ENST00000504751 TIMP2P16035 220 aa10.3□□□□□ -0.76
TRAPPC13-206ENST00000504751 SCNN1DP51172 638 aa10.3□□□□□ -0.76
TRAPPC13-206ENST00000504751 PDE4CQ08493 712 aa10.3□□□□□ -0.76
TRAPPC13-206ENST00000504751 CYP2U1Q7Z449 544 aa10.29□□□□□ -0.76
TRAPPC13-206ENST00000504751 ESF1Q9H501 851 aaKnown RBP10.29□□□□□ -0.76
TRAPPC13-206ENST00000504751 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
TRAPPC13-206ENST00000504751 ZIC2O95409 532 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 SEC13P55735 322 aa10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 WDR4P57081 412 aaKnown RBP10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 Q6ZVU0 165 aa10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 HPS1Q92902 700 aa10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
TRAPPC13-206ENST00000504751 SFI1A8K8P3 1242 aa10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 WASLO00401 505 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 ADH1AP07327 375 aa10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 CBLBQ13191 982 aa10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 KDF1Q8NAX2 398 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 SLAIN2Q9P270 581 aa10.27□□□□□ -0.77
TRAPPC13-206ENST00000504751 GDF10P55107 478 aa10.26□□□□□ -0.77
TRAPPC13-206ENST00000504751 SWI5Q1ZZU3 235 aa10.26□□□□□ -0.77
TRAPPC13-206ENST00000504751 ETNK1Q9HBU6 452 aa10.26□□□□□ -0.77
TRAPPC13-206ENST00000504751 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
TRAPPC13-206ENST00000504751 GNRH1P01148 92 aa10.25□□□□□ -0.77
TRAPPC13-206ENST00000504751 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAPPC13-206ENST00000504751 CLP1Q92989 425 aaKnown RBP10.25□□□□□ -0.77
TRAPPC13-206ENST00000504751 M0R2N6 131 aa10.24□□□□□ -0.77
TRAPPC13-206ENST00000504751 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
TRAPPC13-206ENST00000504751 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
TRAPPC13-206ENST00000504751 INHAP05111 366 aa10.23□□□□□ -0.77
TRAPPC13-206ENST00000504751 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
TRAPPC13-206ENST00000504751 TSEN2Q8NCE0 465 aaKnown RBP10.23□□□□□ -0.77
TRAPPC13-206ENST00000504751 RAB6BQ9NRW1 208 aa10.23□□□□□ -0.77
TRAPPC13-206ENST00000504751 BRD1O95696 1058 aa10.21□□□□□ -0.77
TRAPPC13-206ENST00000504751 IL2RAP01589 272 aa10.21□□□□□ -0.77
TRAPPC13-206ENST00000504751 EPHA4P54764 986 aa10.21□□□□□ -0.77
TRAPPC13-206ENST00000504751 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
TRAPPC13-206ENST00000504751 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.77
TRAPPC13-206ENST00000504751 OCLNQ16625 522 aa10.2□□□□□ -0.78
TRAPPC13-206ENST00000504751 ESCO1Q5FWF5 840 aa10.2□□□□□ -0.78
TRAPPC13-206ENST00000504751 PHLDB3Q6NSJ2 640 aa10.2□□□□□ -0.78
TRAPPC13-206ENST00000504751 SLC4A9Q96Q91 983 aa10.2□□□□□ -0.78
TRAPPC13-206ENST00000504751 HRH3Q9Y5N1 445 aa10.2□□□□□ -0.78
TRAPPC13-206ENST00000504751 A0A1W2PRU2 124 aa10.19□□□□□ -0.78
TRAPPC13-206ENST00000504751 FAM187AA6NFU0 413 aa10.19□□□□□ -0.78
TRAPPC13-206ENST00000504751 SSFA2P28290 1259 aa10.19□□□□□ -0.78
TRAPPC13-206ENST00000504751 PTGIRP43119 386 aa10.19□□□□□ -0.78
TRAPPC13-206ENST00000504751 CLN3Q13286 438 aa10.19□□□□□ -0.78
TRAPPC13-206ENST00000504751 XAGE2Q96GT9 111 aa10.19□□□□□ -0.78
TRAPPC13-206ENST00000504751 BACH1O14867 736 aa10.18□□□□□ -0.78
TRAPPC13-206ENST00000504751 AVPP01185 164 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms