RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 FAM83GA6ND36 823 aa9.07□□□□□ -0.96
SNX25-202ENST00000504273 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
SNX25-202ENST00000504273 FCHSD2O94868 740 aa9.06□□□□□ -0.96
SNX25-202ENST00000504273 RIPK4P57078 832 aa9.06□□□□□ -0.96
SNX25-202ENST00000504273 VPS72Q15906 364 aa9.06□□□□□ -0.96
SNX25-202ENST00000504273 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
SNX25-202ENST00000504273 SSH2Q76I76 1423 aa9.06□□□□□ -0.96
SNX25-202ENST00000504273 ANP32AP39687 249 aaKnown RBP9.06□□□□□ -0.96
SNX25-202ENST00000504273 PRKAR2BP31323 418 aa9.05□□□□□ -0.96
SNX25-202ENST00000504273 NPM2Q86SE8 214 aaKnown RBP9.05□□□□□ -0.96
SNX25-202ENST00000504273 SSH1Q8WYL5 1049 aa9.05□□□□□ -0.96
SNX25-202ENST00000504273 XRN1Q8IZH2 1706 aaKnown RBP9.05□□□□□ -0.96
SNX25-202ENST00000504273 RREB1Q92766 1687 aa9.05□□□□□ -0.96
SNX25-202ENST00000504273 EN1Q05925 392 aaPredicted RBP9.05□□□□□ -0.96
SNX25-202ENST00000504273 NWD2Q9ULI1 1742 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 HMOX1P09601 288 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 RRS1Q15050 365 aaKnown RBP9.04□□□□□ -0.96
SNX25-202ENST00000504273 TNS1Q9HBL0 1735 aaKnown RBP9.04□□□□□ -0.96
SNX25-202ENST00000504273 OVOS2A0A0J9YW53 1432 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 OVOS2Q6IE36 1432 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 USP19O94966 1318 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 FMN2Q9NZ56 1722 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 CAMTA1Q9Y6Y1 1673 aa9.04□□□□□ -0.96
SNX25-202ENST00000504273 PPM1GO15355 546 aaPredicted RBP9.03□□□□□ -0.96
SNX25-202ENST00000504273 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
SNX25-202ENST00000504273 TRIM27P14373 513 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 RGS3P49796 1198 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
SNX25-202ENST00000504273 FAM161AQ3B820 660 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 THUMPD2Q9BTF0 503 aaKnown RBP9.03□□□□□ -0.96
SNX25-202ENST00000504273 MAPK8IP3Q9UPT6 1336 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 CAMKK2Q96RR4 588 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 PLEKHG3A1L390 1219 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 ZNF853P0CG23 659 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 NFE2L2Q16236 605 aa9.03□□□□□ -0.96
SNX25-202ENST00000504273 USP6P35125 1406 aa9.02□□□□□ -0.96
SNX25-202ENST00000504273 CANXP27824 592 aaKnown RBP9.02□□□□□ -0.97
SNX25-202ENST00000504273 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
SNX25-202ENST00000504273 PIK3C2AO00443 1686 aa9.02□□□□□ -0.97
SNX25-202ENST00000504273 ACEP12821 1306 aa9.02□□□□□ -0.97
SNX25-202ENST00000504273 TTC21BQ7Z4L5 1316 aa9.02□□□□□ -0.97
SNX25-202ENST00000504273 SEC24BO95487 1268 aa9.02□□□□□ -0.97
SNX25-202ENST00000504273 ZKSCAN2Q63HK3 967 aa9.02□□□□□ -0.97
SNX25-202ENST00000504273 NOB1Q9ULX3 412 aaKnown RBP9.02□□□□□ -0.97
SNX25-202ENST00000504273 MAP3K5Q99683 1374 aa9.02□□□□□ -0.97
SNX25-202ENST00000504273 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
SNX25-202ENST00000504273 DZIP1LQ8IYY4 767 aaKnown RBP9.01□□□□□ -0.97
SNX25-202ENST00000504273 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
SNX25-202ENST00000504273 TNS4Q8IZW8 715 aa9.01□□□□□ -0.97
SNX25-202ENST00000504273 ZNF692Q9BU19 519 aaPredicted RBP9.01□□□□□ -0.97
SNX25-202ENST00000504273 USP31Q70CQ4 1352 aa9.01□□□□□ -0.97
SNX25-202ENST00000504273 AAMPQ13685 434 aa9□□□□□ -0.97
SNX25-202ENST00000504273 COG3Q96JB2 828 aa9□□□□□ -0.97
SNX25-202ENST00000504273 SMC4Q9NTJ3 1288 aa9□□□□□ -0.97
SNX25-202ENST00000504273 NUTM2FA1L443 756 aa9□□□□□ -0.97
SNX25-202ENST00000504273 VAMP4O75379 141 aa9□□□□□ -0.97
SNX25-202ENST00000504273 APLP1P51693 650 aa9□□□□□ -0.97
SNX25-202ENST00000504273 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
SNX25-202ENST00000504273 AMOTL2Q9Y2J4 779 aa9□□□□□ -0.97
SNX25-202ENST00000504273 USP54Q70EL1 1684 aa9□□□□□ -0.97
SNX25-202ENST00000504273 BRPF1P55201 1214 aaPredicted RBP9□□□□□ -0.97
SNX25-202ENST00000504273 EIF4A2Q14240 407 aaKnown RBP9□□□□□ -0.97
SNX25-202ENST00000504273 ATF7IPQ6VMQ6 1270 aa9□□□□□ -0.97
SNX25-202ENST00000504273 AEBP1Q8IUX7 1158 aa9□□□□□ -0.97
SNX25-202ENST00000504273 TMEM57Q8N5G2 664 aa9□□□□□ -0.97
SNX25-202ENST00000504273 PNNQ9H307 717 aaKnown RBP9□□□□□ -0.97
SNX25-202ENST00000504273 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
SNX25-202ENST00000504273 C1orf167Q5SNV9 1468 aa8.99□□□□□ -0.97
SNX25-202ENST00000504273 MBIPQ9NS73 344 aa8.99□□□□□ -0.97
SNX25-202ENST00000504273 ALDH1L2Q3SY69 923 aa8.98□□□□□ -0.97
SNX25-202ENST00000504273 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
SNX25-202ENST00000504273 PMFBP1Q8TBY8 1022 aa8.98□□□□□ -0.97
SNX25-202ENST00000504273 ZBTB40Q9NUA8 1239 aa8.98□□□□□ -0.97
SNX25-202ENST00000504273 EZH2Q15910 746 aaKnown RBP8.98□□□□□ -0.97
SNX25-202ENST00000504273 DCTN1Q14203 1278 aa8.98□□□□□ -0.97
SNX25-202ENST00000504273 NPHP3Q7Z494 1330 aa8.97□□□□□ -0.97
SNX25-202ENST00000504273 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
SNX25-202ENST00000504273 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
SNX25-202ENST00000504273 C8orf58Q8NAV2 365 aa8.97□□□□□ -0.97
SNX25-202ENST00000504273 HSP90AB2PQ58FF8 381 aa8.97□□□□□ -0.97
SNX25-202ENST00000504273 FAM196AQ6ZSG2 479 aa8.97□□□□□ -0.97
SNX25-202ENST00000504273 IFT57Q9NWB7 429 aa8.97□□□□□ -0.97
SNX25-202ENST00000504273 HDAC1Q13547 482 aaPredicted RBP8.97□□□□□ -0.97
SNX25-202ENST00000504273 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
SNX25-202ENST00000504273 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.97
SNX25-202ENST00000504273 A0A0U1RQG5 324 aaPredicted RBP8.96□□□□□ -0.98
SNX25-202ENST00000504273 RGPD3A6NKT7 1758 aaPredicted RBP8.96□□□□□ -0.98
SNX25-202ENST00000504273 RGPD4Q7Z3J3 1758 aa8.96□□□□□ -0.98
SNX25-202ENST00000504273 SHANK3Q9BYB0 1731 aa8.96□□□□□ -0.98
SNX25-202ENST00000504273 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 RWDD1Q9H446 243 aaPredicted RBP8.95□□□□□ -0.98
SNX25-202ENST00000504273 ITPRIPQ8IWB1 547 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 FTSJ3Q8IY81 847 aaKnown RBP8.95□□□□□ -0.98
SNX25-202ENST00000504273 CRB1P82279 1406 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 CASZ1Q86V15 1759 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 ZBTB7BO15156 539 aaPredicted RBP8.95□□□□□ -0.98
SNX25-202ENST00000504273 SULT6B1Q6IMI4 303 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 SMC5Q8IY18 1101 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 DDX19BQ9UMR2 479 aa8.95□□□□□ -0.98
SNX25-202ENST00000504273 MAP3K19Q56UN5 1328 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms