RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 KIF24Q5T7B8 1368 aa21.73■■□□□ 1.07
POLR2J3-209ENST00000504157 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
POLR2J3-209ENST00000504157 GSPT1P15170 499 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-209ENST00000504157 ZDHHC9Q9Y397 364 aa21.73■■□□□ 1.07
POLR2J3-209ENST00000504157 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-209ENST00000504157 USP26Q9BXU7 913 aa21.72■■□□□ 1.07
POLR2J3-209ENST00000504157 NSFL1CQ9UNZ2 370 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-209ENST00000504157 MRPL50Q8N5N7 158 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-209ENST00000504157 CGNQ9P2M7 1197 aaKnown RBP21.71■■□□□ 1.07
POLR2J3-209ENST00000504157 DIP2CQ9Y2E4 1556 aa21.71■■□□□ 1.07
POLR2J3-209ENST00000504157 FAM177BA6PVY3 158 aa21.7■■□□□ 1.06
POLR2J3-209ENST00000504157 UVSSAQ2YD98 709 aa21.7■■□□□ 1.06
POLR2J3-209ENST00000504157 PLEKHM2Q8IWE5 1019 aa21.7■■□□□ 1.06
POLR2J3-209ENST00000504157 A0A1W2PP64 1363 aa21.69■■□□□ 1.06
POLR2J3-209ENST00000504157 ST18O60284 1047 aa21.69■■□□□ 1.06
POLR2J3-209ENST00000504157 TTC22Q5TAA0 569 aa21.69■■□□□ 1.06
POLR2J3-209ENST00000504157 OGFRQ9NZT2 677 aa21.69■■□□□ 1.06
POLR2J3-209ENST00000504157 U2AF2P26368 475 aaKnown RBP eCLIP21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 GABPB1Q06547 395 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 INTS3Q68E01 1043 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 ZNF830Q96NB3 372 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 ZNF771Q7L3S4 317 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 DIAPH3Q9NSV4 1193 aa21.68■■□□□ 1.06
POLR2J3-209ENST00000504157 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
POLR2J3-209ENST00000504157 CTIFO43310 598 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-209ENST00000504157 FCHSD2O94868 740 aa21.67■■□□□ 1.06
POLR2J3-209ENST00000504157 FAM184AQ8NB25 1140 aa21.67■■□□□ 1.06
POLR2J3-209ENST00000504157 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
POLR2J3-209ENST00000504157 VAMP4O75379 141 aa21.67■■□□□ 1.06
POLR2J3-209ENST00000504157 FAM135BQ49AJ0 1406 aa21.66■■□□□ 1.06
POLR2J3-209ENST00000504157 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
POLR2J3-209ENST00000504157 LRRC7Q96NW7 1537 aa21.66■■□□□ 1.06
POLR2J3-209ENST00000504157 ZGPATQ8N5A5 531 aaKnown RBP21.65■■□□□ 1.06
POLR2J3-209ENST00000504157 SYAP1Q96A49 352 aaPredicted RBP21.65■■□□□ 1.06
POLR2J3-209ENST00000504157 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
POLR2J3-209ENST00000504157 C1orf115Q9H7X2 142 aa21.65■■□□□ 1.06
POLR2J3-209ENST00000504157 IGSF3O75054 1194 aa21.65■■□□□ 1.06
POLR2J3-209ENST00000504157 VGLL3A8MV65 326 aa21.64■■□□□ 1.06
POLR2J3-209ENST00000504157 TTC12Q9H892 705 aaPredicted RBP21.64■■□□□ 1.06
POLR2J3-209ENST00000504157 TMEM132EQ6IEE7 984 aa21.64■■□□□ 1.05
POLR2J3-209ENST00000504157 C17orf53Q8N3J3 647 aaPredicted RBP21.63■■□□□ 1.05
POLR2J3-209ENST00000504157 PHF14O94880 888 aa21.63■■□□□ 1.05
POLR2J3-209ENST00000504157 RIOK3O14730 519 aaKnown RBP21.62■■□□□ 1.05
POLR2J3-209ENST00000504157 SLC20A2Q08357 652 aa21.62■■□□□ 1.05
POLR2J3-209ENST00000504157 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
POLR2J3-209ENST00000504157 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
POLR2J3-209ENST00000504157 ARHGEF40Q8TER5 1519 aa21.62■■□□□ 1.05
POLR2J3-209ENST00000504157 CDK11BP21127 795 aaKnown RBP21.61■■□□□ 1.05
POLR2J3-209ENST00000504157 CHAF1AQ13111 956 aaPredicted RBP21.61■■□□□ 1.05
POLR2J3-209ENST00000504157 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
POLR2J3-209ENST00000504157 ZBTB22O15209 634 aa21.61■■□□□ 1.05
POLR2J3-209ENST00000504157 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
POLR2J3-209ENST00000504157 GGT6Q6P531 493 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 GGNBP2Q9H3C7 697 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 ATAD2Q6PL18 1390 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 FYB1O15117 783 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 IRX5P78411 483 aaPredicted RBP21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 CABP2Q9NPB3 220 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 NPATQ14207 1427 aa21.6■■□□□ 1.05
POLR2J3-209ENST00000504157 REC8O95072 547 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 SLFN14P0C7P3 912 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 SYCP1Q15431 976 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 ADCY5O95622 1261 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 ZNF853P0CG23 659 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 GNAI1P63096 354 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 MPNDQ8N594 471 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 KIAA1524Q8TCG1 905 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 USP25Q9UHP3 1055 aa21.59■■□□□ 1.05
POLR2J3-209ENST00000504157 CD163L1Q9NR16 1453 aa21.58■■□□□ 1.05
POLR2J3-209ENST00000504157 CAMSAP1Q5T5Y3 1602 aa21.58■■□□□ 1.05
POLR2J3-209ENST00000504157 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.04
POLR2J3-209ENST00000504157 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
POLR2J3-209ENST00000504157 CTNNA3Q9UI47 895 aa21.57■■□□□ 1.04
POLR2J3-209ENST00000504157 MCM2P49736 904 aa21.57■■□□□ 1.04
POLR2J3-209ENST00000504157 TERF2IPQ9NYB0 399 aa21.57■■□□□ 1.04
POLR2J3-209ENST00000504157 PIK3C2BO00750 1634 aa21.57■■□□□ 1.04
POLR2J3-209ENST00000504157 CCDC66A2RUB6 948 aa21.56■■□□□ 1.04
POLR2J3-209ENST00000504157 BRD1O95696 1058 aa21.56■■□□□ 1.04
POLR2J3-209ENST00000504157 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
POLR2J3-209ENST00000504157 CHGAP10645 457 aaKnown RBP21.56■■□□□ 1.04
POLR2J3-209ENST00000504157 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 SDSP20132 328 aa21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 KCNJ4P48050 445 aa21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 TSPYL6Q8N831 410 aa21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 DDX41Q9UJV9 622 aaKnown RBP21.55■■□□□ 1.04
POLR2J3-209ENST00000504157 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
POLR2J3-209ENST00000504157 NCBP1Q09161 790 aaKnown RBP21.54■■□□□ 1.04
POLR2J3-209ENST00000504157 TPM3P06753 285 aa21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 CUL4AQ13619 759 aa21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 MLECQ14165 292 aa21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 ERC2O15083 957 aa21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 RPAP2Q8IXW5 612 aaPredicted RBP21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 KLHL34Q8N239 644 aa21.53■■□□□ 1.04
POLR2J3-209ENST00000504157 MORC2Q9Y6X9 1032 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms