RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 IPO8O15397 1037 aaKnown RBP14.73□□□□□ -0.05
USP46-204ENST00000503060 AMPHP49418 695 aa14.73□□□□□ -0.05
USP46-204ENST00000503060 BRPF1P55201 1214 aaPredicted RBP14.73□□□□□ -0.05
USP46-204ENST00000503060 VAMP4O75379 141 aa14.73□□□□□ -0.05
USP46-204ENST00000503060 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
USP46-204ENST00000503060 GLIPR1L2Q4G1C9 344 aa14.72□□□□□ -0.05
USP46-204ENST00000503060 RGS3P49796 1198 aa14.72□□□□□ -0.05
USP46-204ENST00000503060 NUTM2GQ5VZR2 741 aa14.72□□□□□ -0.05
USP46-204ENST00000503060 ABTB2Q8N961 1025 aa14.72□□□□□ -0.05
USP46-204ENST00000503060 KIF24Q5T7B8 1368 aa14.71□□□□□ -0.05
USP46-204ENST00000503060 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
USP46-204ENST00000503060 TSPYL6Q8N831 410 aa14.71□□□□□ -0.05
USP46-204ENST00000503060 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
USP46-204ENST00000503060 KDRP35968 1356 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 NWD1Q149M9 1564 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 CLSTN1O94985 981 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 ZNF592Q92610 1267 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 ZBTB7CA1YPR0 619 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 ITPRIPQ8IWB1 547 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 TMEM57Q8N5G2 664 aa14.7□□□□□ -0.06
USP46-204ENST00000503060 MRPL50Q8N5N7 158 aaKnown RBP14.7□□□□□ -0.06
USP46-204ENST00000503060 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
USP46-204ENST00000503060 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
USP46-204ENST00000503060 EYA1Q99502 592 aa14.69□□□□□ -0.06
USP46-204ENST00000503060 HOXC9P31274 260 aa14.68□□□□□ -0.06
USP46-204ENST00000503060 FAM161AQ3B820 660 aa14.68□□□□□ -0.06
USP46-204ENST00000503060 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
USP46-204ENST00000503060 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
USP46-204ENST00000503060 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
USP46-204ENST00000503060 IPO9Q96P70 1041 aaKnown RBP14.68□□□□□ -0.06
USP46-204ENST00000503060 ELL2O00472 640 aaPredicted RBP14.67□□□□□ -0.06
USP46-204ENST00000503060 MCM10Q7L590 875 aa14.67□□□□□ -0.06
USP46-204ENST00000503060 ARHGAP45Q92619 1136 aa14.67□□□□□ -0.06
USP46-204ENST00000503060 CHL1O00533 1208 aa14.66□□□□□ -0.06
USP46-204ENST00000503060 MTHFSDQ2M296 383 aaKnown RBP14.66□□□□□ -0.06
USP46-204ENST00000503060 C8orf34Q49A92 452 aa14.66□□□□□ -0.06
USP46-204ENST00000503060 RTL1A6NKG5 1358 aa14.66□□□□□ -0.06
USP46-204ENST00000503060 PSME1Q06323 249 aa14.66□□□□□ -0.06
USP46-204ENST00000503060 CRB1P82279 1406 aa14.65□□□□□ -0.06
USP46-204ENST00000503060 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
USP46-204ENST00000503060 ZBTB40Q9NUA8 1239 aa14.65□□□□□ -0.06
USP46-204ENST00000503060 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
USP46-204ENST00000503060 FOXO3O43524 673 aa14.64□□□□□ -0.07
USP46-204ENST00000503060 DEKP35659 375 aaKnown RBP14.64□□□□□ -0.07
USP46-204ENST00000503060 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
USP46-204ENST00000503060 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
USP46-204ENST00000503060 NFAT5O94916 1531 aa14.64□□□□□ -0.07
USP46-204ENST00000503060 HDAC1Q13547 482 aaPredicted RBP14.64□□□□□ -0.07
USP46-204ENST00000503060 PROSER2Q86WR7 435 aaPredicted RBP14.64□□□□□ -0.07
USP46-204ENST00000503060 KIAA0232Q92628 1395 aa14.63□□□□□ -0.07
USP46-204ENST00000503060 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
USP46-204ENST00000503060 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
USP46-204ENST00000503060 ORAI2Q96SN7 254 aa14.63□□□□□ -0.07
USP46-204ENST00000503060 LTN1O94822 1766 aa14.62□□□□□ -0.07
USP46-204ENST00000503060 IP6K1Q92551 441 aa14.62□□□□□ -0.07
USP46-204ENST00000503060 LTV1Q96GA3 475 aaPredicted RBP14.62□□□□□ -0.07
USP46-204ENST00000503060 ABCC4O15439 1325 aa14.62□□□□□ -0.07
USP46-204ENST00000503060 NBR1Q14596 966 aa14.61□□□□□ -0.07
USP46-204ENST00000503060 API5Q9BZZ5 524 aaKnown RBP14.61□□□□□ -0.07
USP46-204ENST00000503060 ZMYND15Q9H091 742 aa14.61□□□□□ -0.07
USP46-204ENST00000503060 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
USP46-204ENST00000503060 KRT24Q2M2I5 525 aa14.61□□□□□ -0.07
USP46-204ENST00000503060 KCNH5Q8NCM2 988 aa14.61□□□□□ -0.07
USP46-204ENST00000503060 CHMP4BQ9H444 224 aaKnown RBP14.61□□□□□ -0.07
USP46-204ENST00000503060 ZBTB47Q9UFB7 747 aaPredicted RBP14.6□□□□□ -0.07
USP46-204ENST00000503060 TMED8Q6PL24 325 aaPredicted RBP14.6□□□□□ -0.07
USP46-204ENST00000503060 ARID3AQ99856 593 aa14.6□□□□□ -0.07
USP46-204ENST00000503060 ZBTB7BO15156 539 aaPredicted RBP14.59□□□□□ -0.07
USP46-204ENST00000503060 PSMD1Q99460 953 aa14.59□□□□□ -0.07
USP46-204ENST00000503060 C19orf44Q9H6X5 657 aa14.58□□□□□ -0.07
USP46-204ENST00000503060 C1orf167Q5SNV9 1468 aa14.58□□□□□ -0.07
USP46-204ENST00000503060 LRRC37A3O60309 1634 aa14.58□□□□□ -0.07
USP46-204ENST00000503060 PHRF1Q9P1Y6 1649 aaKnown RBP14.58□□□□□ -0.07
USP46-204ENST00000503060 SMC5Q8IY18 1101 aa14.58□□□□□ -0.08
USP46-204ENST00000503060 TSPYL4Q9UJ04 414 aa14.58□□□□□ -0.08
USP46-204ENST00000503060 VIRMAQ69YN4 1812 aaKnown RBP14.58□□□□□ -0.08
USP46-204ENST00000503060 SLIT3O75094 1523 aa14.58□□□□□ -0.08
USP46-204ENST00000503060 KIF1AQ12756 1690 aa14.58□□□□□ -0.08
USP46-204ENST00000503060 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
USP46-204ENST00000503060 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
USP46-204ENST00000503060 MIS18AQ9NYP9 233 aa14.57□□□□□ -0.08
USP46-204ENST00000503060 TRPM3Q9HCF6 1732 aaPredicted RBP14.57□□□□□ -0.08
USP46-204ENST00000503060 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
USP46-204ENST00000503060 MSH6P52701 1360 aa14.56□□□□□ -0.08
USP46-204ENST00000503060 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
USP46-204ENST00000503060 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
USP46-204ENST00000503060 GCP02774 474 aa14.55□□□□□ -0.08
USP46-204ENST00000503060 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
USP46-204ENST00000503060 RGS12O14924 1447 aa14.55□□□□□ -0.08
USP46-204ENST00000503060 USP19O94966 1318 aa14.55□□□□□ -0.08
USP46-204ENST00000503060 NBPF6Q5VWK0 638 aa14.54□□□□□ -0.08
USP46-204ENST00000503060 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
USP46-204ENST00000503060 NBPF4Q96M43 638 aa14.54□□□□□ -0.08
USP46-204ENST00000503060 TMEM94Q12767 1356 aa14.54□□□□□ -0.08
USP46-204ENST00000503060 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
USP46-204ENST00000503060 PTPRCP08575 1304 aa14.54□□□□□ -0.08
USP46-204ENST00000503060 INTS3Q68E01 1043 aaKnown RBP14.53□□□□□ -0.08
USP46-204ENST00000503060 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
USP46-204ENST00000503060 C1orf115Q9H7X2 142 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms