RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 KDRP35968 1356 aa20.71■□□□□ 0.91
VCAN-204ENST00000502527 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.91
VCAN-204ENST00000502527 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
VCAN-204ENST00000502527 RGS12O14924 1447 aa20.69■□□□□ 0.9
VCAN-204ENST00000502527 HSCBQ8IWL3 235 aa20.68■□□□□ 0.9
VCAN-204ENST00000502527 IGSF1Q8N6C5 1336 aa20.68■□□□□ 0.9
VCAN-204ENST00000502527 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
VCAN-204ENST00000502527 DCTPP1Q9H773 170 aa20.68■□□□□ 0.9
VCAN-204ENST00000502527 FER1L4A9Z1Z3 1794 aa20.68■□□□□ 0.9
VCAN-204ENST00000502527 RPAP2Q8IXW5 612 aaPredicted RBP20.68■□□□□ 0.9
VCAN-204ENST00000502527 ANKRD44Q8N8A2 993 aa20.67■□□□□ 0.9
VCAN-204ENST00000502527 EYA1Q99502 592 aa20.67■□□□□ 0.9
VCAN-204ENST00000502527 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
VCAN-204ENST00000502527 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
VCAN-204ENST00000502527 NLRP6P59044 892 aa20.66■□□□□ 0.9
VCAN-204ENST00000502527 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
VCAN-204ENST00000502527 FOXO3O43524 673 aa20.66■□□□□ 0.9
VCAN-204ENST00000502527 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
VCAN-204ENST00000502527 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
VCAN-204ENST00000502527 SLC4A2P04920 1241 aa20.65■□□□□ 0.9
VCAN-204ENST00000502527 EIF5BO60841 1220 aaKnown RBP20.65■□□□□ 0.9
VCAN-204ENST00000502527 KCNA6P17658 529 aa20.65■□□□□ 0.9
VCAN-204ENST00000502527 SNX21Q969T3 373 aa20.65■□□□□ 0.9
VCAN-204ENST00000502527 PIK3C2AO00443 1686 aa20.65■□□□□ 0.9
VCAN-204ENST00000502527 TBC1D9Q6ZT07 1266 aa20.64■□□□□ 0.89
VCAN-204ENST00000502527 MIS18AQ9NYP9 233 aa20.63■□□□□ 0.89
VCAN-204ENST00000502527 CHMP5Q9NZZ3 219 aa20.63■□□□□ 0.89
VCAN-204ENST00000502527 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
VCAN-204ENST00000502527 SPRYD3Q8NCJ5 442 aa20.63■□□□□ 0.89
VCAN-204ENST00000502527 CDC45O75419 566 aa20.62■□□□□ 0.89
VCAN-204ENST00000502527 CEP85Q6P2H3 762 aa20.62■□□□□ 0.89
VCAN-204ENST00000502527 RGPD8O14715 1765 aaPredicted RBP20.62■□□□□ 0.89
VCAN-204ENST00000502527 MSH6P52701 1360 aa20.62■□□□□ 0.89
VCAN-204ENST00000502527 CEP170BQ9Y4F5 1589 aaPredicted RBP20.62■□□□□ 0.89
VCAN-204ENST00000502527 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
VCAN-204ENST00000502527 RTL1A6NKG5 1358 aa20.61■□□□□ 0.89
VCAN-204ENST00000502527 HOXC9P31274 260 aa20.61■□□□□ 0.89
VCAN-204ENST00000502527 CCT4P50991 539 aaKnown RBP20.59■□□□□ 0.89
VCAN-204ENST00000502527 ABTB2Q8N961 1025 aa20.59■□□□□ 0.89
VCAN-204ENST00000502527 MEIS3Q99687 375 aa20.59■□□□□ 0.89
VCAN-204ENST00000502527 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.89
VCAN-204ENST00000502527 GSPT1P15170 499 aaKnown RBP20.58■□□□□ 0.88
VCAN-204ENST00000502527 STK31Q9BXU1 1019 aa20.58■□□□□ 0.88
VCAN-204ENST00000502527 HMMRO75330 724 aa20.57■□□□□ 0.88
VCAN-204ENST00000502527 TTC22Q5TAA0 569 aa20.57■□□□□ 0.88
VCAN-204ENST00000502527 NUTM2GQ5VZR2 741 aa20.57■□□□□ 0.88
VCAN-204ENST00000502527 NCOA3Q9Y6Q9 1424 aa20.57■□□□□ 0.88
VCAN-204ENST00000502527 KIF2CQ99661 725 aa20.56■□□□□ 0.88
VCAN-204ENST00000502527 SOS1Q07889 1333 aaPredicted RBP20.56■□□□□ 0.88
VCAN-204ENST00000502527 USP54Q70EL1 1684 aa20.56■□□□□ 0.88
VCAN-204ENST00000502527 G2E3Q7L622 706 aa20.55■□□□□ 0.88
VCAN-204ENST00000502527 BABAM1Q9NWV8 329 aa20.55■□□□□ 0.88
VCAN-204ENST00000502527 MCM4P33991 863 aa20.55■□□□□ 0.88
VCAN-204ENST00000502527 CCDC30Q5VVM6 783 aa20.55■□□□□ 0.88
VCAN-204ENST00000502527 SLC4A10Q6U841 1118 aa20.55■□□□□ 0.88
VCAN-204ENST00000502527 HSP90AB1P08238 724 aaKnown RBP20.54■□□□□ 0.88
VCAN-204ENST00000502527 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
VCAN-204ENST00000502527 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
VCAN-204ENST00000502527 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
VCAN-204ENST00000502527 LRRC37A3O60309 1634 aa20.53■□□□□ 0.88
VCAN-204ENST00000502527 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
VCAN-204ENST00000502527 F6X3S4 739 aa20.52■□□□□ 0.88
VCAN-204ENST00000502527 DDIT3P35638 169 aa20.52■□□□□ 0.88
VCAN-204ENST00000502527 ANKLE2Q86XL3 938 aa20.52■□□□□ 0.88
VCAN-204ENST00000502527 MARF1Q9Y4F3 1742 aaKnown RBP20.52■□□□□ 0.88
VCAN-204ENST00000502527 CIZ1Q9ULV3 898 aaPredicted RBP20.52■□□□□ 0.87
VCAN-204ENST00000502527 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
VCAN-204ENST00000502527 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
VCAN-204ENST00000502527 GNAI2P04899 355 aa20.5■□□□□ 0.87
VCAN-204ENST00000502527 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
VCAN-204ENST00000502527 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
VCAN-204ENST00000502527 FLIIQ13045 1269 aa20.5■□□□□ 0.87
VCAN-204ENST00000502527 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
VCAN-204ENST00000502527 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
VCAN-204ENST00000502527 SMARCA5O60264 1052 aaPredicted RBP20.49■□□□□ 0.87
VCAN-204ENST00000502527 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
VCAN-204ENST00000502527 APBB1O00213 710 aa20.49■□□□□ 0.87
VCAN-204ENST00000502527 GNAI3P08754 354 aa20.49■□□□□ 0.87
VCAN-204ENST00000502527 FKBP5Q13451 457 aaPredicted RBP20.49■□□□□ 0.87
VCAN-204ENST00000502527 K7ELQ4 463 aaPredicted RBP20.48■□□□□ 0.87
VCAN-204ENST00000502527 IP6K1Q92551 441 aa20.48■□□□□ 0.87
VCAN-204ENST00000502527 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
VCAN-204ENST00000502527 SDSP20132 328 aa20.47■□□□□ 0.87
VCAN-204ENST00000502527 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
VCAN-204ENST00000502527 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
VCAN-204ENST00000502527 RABEP1Q15276 862 aa20.46■□□□□ 0.87
VCAN-204ENST00000502527 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
VCAN-204ENST00000502527 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
VCAN-204ENST00000502527 USP26Q9BXU7 913 aa20.45■□□□□ 0.86
VCAN-204ENST00000502527 CD2BP2O95400 341 aaKnown RBP20.44■□□□□ 0.86
VCAN-204ENST00000502527 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
VCAN-204ENST00000502527 KCNH5Q8NCM2 988 aa20.44■□□□□ 0.86
VCAN-204ENST00000502527 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
VCAN-204ENST00000502527 CHD2O14647 1828 aaKnown RBP20.44■□□□□ 0.86
VCAN-204ENST00000502527 PSME1Q06323 249 aa20.44■□□□□ 0.86
VCAN-204ENST00000502527 USHBP1Q8N6Y0 703 aa20.44■□□□□ 0.86
VCAN-204ENST00000502527 FAM208AQ9UK61 1670 aaKnown RBP20.43■□□□□ 0.86
VCAN-204ENST00000502527 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
VCAN-204ENST00000502527 TRAK2O60296 914 aa20.42■□□□□ 0.86
VCAN-204ENST00000502527 ADGRL3Q9HAR2 1447 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms