RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 RGPD3A6NKT7 1758 aaPredicted RBP15.88■□□□□ 0.13
SCMH1-217ENST00000498793 RGPD4Q7Z3J3 1758 aa15.88■□□□□ 0.13
SCMH1-217ENST00000498793 SF3B2Q13435 895 aaKnown RBP15.88■□□□□ 0.13
SCMH1-217ENST00000498793 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
SCMH1-217ENST00000498793 EXOC5O00471 708 aa15.87■□□□□ 0.13
SCMH1-217ENST00000498793 APBA3O96018 575 aa15.87■□□□□ 0.13
SCMH1-217ENST00000498793 EYA1Q99502 592 aa15.87■□□□□ 0.13
SCMH1-217ENST00000498793 CCDC125Q86Z20 511 aa15.86■□□□□ 0.13
SCMH1-217ENST00000498793 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
SCMH1-217ENST00000498793 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
SCMH1-217ENST00000498793 COL3A1P02461 1466 aaPredicted RBP15.85■□□□□ 0.13
SCMH1-217ENST00000498793 BAG6P46379 1132 aa15.85■□□□□ 0.13
SCMH1-217ENST00000498793 PSDA5PKW4 1024 aaPredicted RBP15.84■□□□□ 0.13
SCMH1-217ENST00000498793 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
SCMH1-217ENST00000498793 CAMKK2Q96RR4 588 aa15.84■□□□□ 0.13
SCMH1-217ENST00000498793 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
SCMH1-217ENST00000498793 BCL9O00512 1426 aa15.83■□□□□ 0.12
SCMH1-217ENST00000498793 ZCRB1Q8TBF4 217 aaKnown RBP15.82■□□□□ 0.12
SCMH1-217ENST00000498793 LY75O60449 1722 aa15.82■□□□□ 0.12
SCMH1-217ENST00000498793 MTHFSP49914 203 aa15.81■□□□□ 0.12
SCMH1-217ENST00000498793 RAPGEF4Q8WZA2 1011 aa15.81■□□□□ 0.12
SCMH1-217ENST00000498793 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
SCMH1-217ENST00000498793 TATP17735 454 aaPredicted RBP15.8■□□□□ 0.12
SCMH1-217ENST00000498793 PAPPAQ13219 1627 aa15.79■□□□□ 0.12
SCMH1-217ENST00000498793 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
SCMH1-217ENST00000498793 CYP27B1O15528 508 aa15.79■□□□□ 0.12
SCMH1-217ENST00000498793 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
SCMH1-217ENST00000498793 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
SCMH1-217ENST00000498793 IL13P35225 146 aa15.78■□□□□ 0.12
SCMH1-217ENST00000498793 PROM2Q8N271 834 aa15.78■□□□□ 0.12
SCMH1-217ENST00000498793 R3HDM1Q15032 1099 aaKnown RBP15.77■□□□□ 0.12
SCMH1-217ENST00000498793 TAF1LQ8IZX4 1826 aa15.77■□□□□ 0.11
SCMH1-217ENST00000498793 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
SCMH1-217ENST00000498793 KCNQ4P56696 695 aa15.76■□□□□ 0.11
SCMH1-217ENST00000498793 SYTL4Q96C24 671 aaPredicted RBP15.76■□□□□ 0.11
SCMH1-217ENST00000498793 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
SCMH1-217ENST00000498793 SCN11AQ9UI33 1791 aa15.76■□□□□ 0.11
SCMH1-217ENST00000498793 HMOX1P09601 288 aa15.75■□□□□ 0.11
SCMH1-217ENST00000498793 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
SCMH1-217ENST00000498793 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
SCMH1-217ENST00000498793 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
SCMH1-217ENST00000498793 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
SCMH1-217ENST00000498793 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
SCMH1-217ENST00000498793 C5P01031 1676 aa15.73■□□□□ 0.11
SCMH1-217ENST00000498793 KDM6AO15550 1401 aaPredicted RBP15.72■□□□□ 0.11
SCMH1-217ENST00000498793 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
SCMH1-217ENST00000498793 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
SCMH1-217ENST00000498793 PDGFDQ9GZP0 370 aaPredicted RBP15.72■□□□□ 0.11
SCMH1-217ENST00000498793 KDRP35968 1356 aa15.72■□□□□ 0.11
SCMH1-217ENST00000498793 LRRC4BQ9NT99 713 aa15.71■□□□□ 0.11
SCMH1-217ENST00000498793 LRP5O75197 1615 aa15.7■□□□□ 0.1
SCMH1-217ENST00000498793 PHKG2P15735 406 aa15.7■□□□□ 0.1
SCMH1-217ENST00000498793 DLG5Q8TDM6 1919 aa15.7■□□□□ 0.1
SCMH1-217ENST00000498793 PLSCR1O15162 318 aa15.69■□□□□ 0.1
SCMH1-217ENST00000498793 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
SCMH1-217ENST00000498793 DIAPH1O60610 1272 aaKnown RBP15.68■□□□□ 0.1
SCMH1-217ENST00000498793 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
SCMH1-217ENST00000498793 MPRIPQ6WCQ1 1025 aa15.68■□□□□ 0.1
SCMH1-217ENST00000498793 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
SCMH1-217ENST00000498793 QSER1Q2KHR3 1735 aa15.68■□□□□ 0.1
SCMH1-217ENST00000498793 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
SCMH1-217ENST00000498793 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
SCMH1-217ENST00000498793 PIGBQ92521 554 aa15.66■□□□□ 0.1
SCMH1-217ENST00000498793 SIPA1L3O60292 1781 aaPredicted RBP15.66■□□□□ 0.1
SCMH1-217ENST00000498793 UBR3Q6ZT12 1888 aa15.65■□□□□ 0.1
SCMH1-217ENST00000498793 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
SCMH1-217ENST00000498793 PALLDQ8WX93 1383 aa15.64■□□□□ 0.09
SCMH1-217ENST00000498793 C4BP0C0L5 1744 aa15.64■□□□□ 0.09
SCMH1-217ENST00000498793 COL5A3P25940 1745 aaPredicted RBP15.64■□□□□ 0.09
SCMH1-217ENST00000498793 TJP1Q07157 1748 aa15.64■□□□□ 0.09
SCMH1-217ENST00000498793 IFNL2Q8IZJ0 200 aa15.64■□□□□ 0.09
SCMH1-217ENST00000498793 MYH14Q7Z406 1995 aaKnown RBP15.64■□□□□ 0.09
SCMH1-217ENST00000498793 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
SCMH1-217ENST00000498793 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
SCMH1-217ENST00000498793 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
SCMH1-217ENST00000498793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCMH1-217ENST00000498793 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
SCMH1-217ENST00000498793 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
SCMH1-217ENST00000498793 AMIGO3Q86WK7 504 aa15.61■□□□□ 0.09
SCMH1-217ENST00000498793 CCNL1Q9UK58 526 aaPredicted RBP15.61■□□□□ 0.09
SCMH1-217ENST00000498793 MRC1P22897 1456 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 PRKAR2BP31323 418 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 PHACTR3Q96KR7 559 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 LGR6Q9HBX8 967 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
SCMH1-217ENST00000498793 UBR2Q8IWV8 1755 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 SLC15A2Q16348 729 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 STK32BQ9NY57 414 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 PLEKHG2Q9H7P9 1386 aa15.59■□□□□ 0.09
SCMH1-217ENST00000498793 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
SCMH1-217ENST00000498793 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
SCMH1-217ENST00000498793 AMOTQ4VCS5 1084 aa15.58■□□□□ 0.08
SCMH1-217ENST00000498793 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
SCMH1-217ENST00000498793 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
SCMH1-217ENST00000498793 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms