RNA–Protein interactions for RNA: ENST00000498751.1

SYNE1-231, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-231ENST00000498751 CCDC136Q96JN2 1154 aa9.94□□□□□ -0.82
SYNE1-231ENST00000498751 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-231ENST00000498751 PHF8Q9UPP1 1060 aa9.94□□□□□ -0.82
SYNE1-231ENST00000498751 NFAT5O94916 1531 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 PLEKHG2Q9H7P9 1386 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 MAP3K19Q56UN5 1328 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 IGSF1Q8N6C5 1336 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 PRKAR2BP31323 418 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 EIF4A2Q14240 407 aaKnown RBP9.93□□□□□ -0.82
SYNE1-231ENST00000498751 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
SYNE1-231ENST00000498751 TRPM3Q9HCF6 1732 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-231ENST00000498751 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 RIPK4P57078 832 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 ALDH1L2Q3SY69 923 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 C19orf44Q9H6X5 657 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 ABCC6O95255 1503 aa9.92□□□□□ -0.82
SYNE1-231ENST00000498751 KDM2BQ8NHM5 1336 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 MS4A1P11836 297 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 PLCG2P16885 1265 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 RRS1Q15050 365 aaKnown RBP9.91□□□□□ -0.82
SYNE1-231ENST00000498751 PMFBP1Q8TBY8 1022 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 IFT57Q9NWB7 429 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 C1orf167Q5SNV9 1468 aa9.91□□□□□ -0.82
SYNE1-231ENST00000498751 USP19O94966 1318 aa9.9□□□□□ -0.82
SYNE1-231ENST00000498751 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
SYNE1-231ENST00000498751 FBLN1P23142 703 aa9.9□□□□□ -0.82
SYNE1-231ENST00000498751 KCNH5Q8NCM2 988 aa9.9□□□□□ -0.82
SYNE1-231ENST00000498751 CRBNQ96SW2 442 aa9.9□□□□□ -0.82
SYNE1-231ENST00000498751 RRP7AQ9Y3A4 280 aaKnown RBP9.9□□□□□ -0.82
SYNE1-231ENST00000498751 CAMTA1Q9Y6Y1 1673 aa9.9□□□□□ -0.83
SYNE1-231ENST00000498751 PSEN1P49768 467 aa9.89□□□□□ -0.83
SYNE1-231ENST00000498751 GNAI1P63096 354 aa9.89□□□□□ -0.83
SYNE1-231ENST00000498751 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
SYNE1-231ENST00000498751 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
SYNE1-231ENST00000498751 ALS2Q96Q42 1657 aa9.89□□□□□ -0.83
SYNE1-231ENST00000498751 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
SYNE1-231ENST00000498751 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 BCAR3O75815 825 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 HAP1P54257 671 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-231ENST00000498751 NLRP6P59044 892 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 CENPQQ7L2Z9 268 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-231ENST00000498751 ARHGAP45Q92619 1136 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
SYNE1-231ENST00000498751 KIF16BQ96L93 1317 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 PLIN1O60240 522 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 HOXC9P31274 260 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-231ENST00000498751 C20orf194Q5TEA3 1177 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 OCEL1Q9H607 264 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
SYNE1-231ENST00000498751 MED1Q15648 1581 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-231ENST00000498751 SOS1Q07889 1333 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-231ENST00000498751 TCERG1O14776 1098 aaKnown RBP9.86□□□□□ -0.83
SYNE1-231ENST00000498751 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-231ENST00000498751 SULT6B1Q6IMI4 303 aa9.86□□□□□ -0.83
SYNE1-231ENST00000498751 ABTB2Q8N961 1025 aa9.86□□□□□ -0.83
SYNE1-231ENST00000498751 IP6K1Q92551 441 aa9.86□□□□□ -0.83
SYNE1-231ENST00000498751 TMEM94Q12767 1356 aa9.86□□□□□ -0.83
SYNE1-231ENST00000498751 STRCQ7RTU9 1775 aa9.86□□□□□ -0.83
SYNE1-231ENST00000498751 CRB1P82279 1406 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 CHL1O00533 1208 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 HMOX1P09601 288 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 EXOSC9Q06265 439 aaKnown RBP9.85□□□□□ -0.83
SYNE1-231ENST00000498751 PDAP1Q13442 181 aaKnown RBP9.85□□□□□ -0.83
SYNE1-231ENST00000498751 ZKSCAN2Q63HK3 967 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-231ENST00000498751 GAS2L2Q8NHY3 880 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 EYA1Q99502 592 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 LMO7Q8WWI1 1683 aa9.85□□□□□ -0.83
SYNE1-231ENST00000498751 LTN1O94822 1766 aa9.84□□□□□ -0.83
SYNE1-231ENST00000498751 KDM4FA0A1W2PPD8 638 aa9.84□□□□□ -0.83
SYNE1-231ENST00000498751 VAMP4O75379 141 aa9.84□□□□□ -0.83
SYNE1-231ENST00000498751 ESCO1Q5FWF5 840 aa9.84□□□□□ -0.83
SYNE1-231ENST00000498751 ARHGEF25Q86VW2 580 aa9.84□□□□□ -0.83
SYNE1-231ENST00000498751 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
SYNE1-231ENST00000498751 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
SYNE1-231ENST00000498751 CRYBG1Q9Y4K1 1723 aa9.83□□□□□ -0.84
SYNE1-231ENST00000498751 POTEMA6NI47 508 aa9.83□□□□□ -0.84
SYNE1-231ENST00000498751 IPO8O15397 1037 aaKnown RBP9.83□□□□□ -0.84
SYNE1-231ENST00000498751 AMPHP49418 695 aa9.83□□□□□ -0.84
SYNE1-231ENST00000498751 PSME1Q06323 249 aa9.83□□□□□ -0.84
SYNE1-231ENST00000498751 MVPQ14764 893 aaKnown RBP9.83□□□□□ -0.84
SYNE1-231ENST00000498751 ATF7IPQ6VMQ6 1270 aa9.83□□□□□ -0.84
SYNE1-231ENST00000498751 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
SYNE1-231ENST00000498751 RBM19Q9Y4C8 960 aaKnown RBP9.83□□□□□ -0.84
SYNE1-231ENST00000498751 XIRP1Q702N8 1843 aaKnown RBP9.83□□□□□ -0.84
SYNE1-231ENST00000498751 POTEGQ6S5H5 508 aa9.82□□□□□ -0.84
SYNE1-231ENST00000498751 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
SYNE1-231ENST00000498751 DZIP1LQ8IYY4 767 aaKnown RBP9.82□□□□□ -0.84
SYNE1-231ENST00000498751 SSH1Q8WYL5 1049 aa9.82□□□□□ -0.84
SYNE1-231ENST00000498751 TSR2Q969E8 191 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms