RNA–Protein interactions for RNA: ENST00000498667.1

EFNA3-203, Transcript of ephrin A3, humanhuman

TSL 2

Gene EFNA3, Length 776 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-203ENST00000498667 USP54Q70EL1 1684 aa15.28■□□□□ 0.04
EFNA3-203ENST00000498667 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
EFNA3-203ENST00000498667 CENPJQ9HC77 1338 aaPredicted RBP15.27■□□□□ 0.04
EFNA3-203ENST00000498667 SYTL4Q96C24 671 aaPredicted RBP15.27■□□□□ 0.04
EFNA3-203ENST00000498667 STAC3Q96MF2 364 aa15.27■□□□□ 0.04
EFNA3-203ENST00000498667 PCNTO95613 3336 aa15.27■□□□□ 0.03
EFNA3-203ENST00000498667 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
EFNA3-203ENST00000498667 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
EFNA3-203ENST00000498667 CCNL1Q9UK58 526 aaPredicted RBP15.26■□□□□ 0.03
EFNA3-203ENST00000498667 TAF1LQ8IZX4 1826 aa15.26■□□□□ 0.03
EFNA3-203ENST00000498667 ANKRD36BQ8N2N9 1353 aa15.25■□□□□ 0.03
EFNA3-203ENST00000498667 TOMM70O94826 608 aa15.25■□□□□ 0.03
EFNA3-203ENST00000498667 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
EFNA3-203ENST00000498667 JMYQ8N9B5 988 aa15.25■□□□□ 0.03
EFNA3-203ENST00000498667 KLRG1Q96E93 195 aa15.25■□□□□ 0.03
EFNA3-203ENST00000498667 MON2Q7Z3U7 1717 aa15.25■□□□□ 0.03
EFNA3-203ENST00000498667 TOGARAM1Q9Y4F4 1720 aa15.25■□□□□ 0.03
EFNA3-203ENST00000498667 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
EFNA3-203ENST00000498667 NMRK2Q9NPI5 230 aa15.23■□□□□ 0.03
EFNA3-203ENST00000498667 FAM208AQ9UK61 1670 aaKnown RBP15.22■□□□□ 0.03
EFNA3-203ENST00000498667 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
EFNA3-203ENST00000498667 KIAA1551Q9HCM1 1747 aa15.21■□□□□ 0.03
EFNA3-203ENST00000498667 RGPD2P0DJD1 1756 aa15.21■□□□□ 0.02
EFNA3-203ENST00000498667 SLC34A2O95436 690 aa15.2■□□□□ 0.02
EFNA3-203ENST00000498667 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
EFNA3-203ENST00000498667 RAB3GAP2Q9H2M9 1393 aa15.2■□□□□ 0.02
EFNA3-203ENST00000498667 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
EFNA3-203ENST00000498667 C4BP0C0L5 1744 aa15.19■□□□□ 0.02
EFNA3-203ENST00000498667 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
EFNA3-203ENST00000498667 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
EFNA3-203ENST00000498667 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
EFNA3-203ENST00000498667 USP47Q96K76 1375 aa15.18■□□□□ 0.02
EFNA3-203ENST00000498667 RBM46Q8TBY0 533 aaKnown RBP15.17■□□□□ 0.02
EFNA3-203ENST00000498667 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
EFNA3-203ENST00000498667 USP31Q70CQ4 1352 aa15.16■□□□□ 0.02
EFNA3-203ENST00000498667 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
EFNA3-203ENST00000498667 SMIM5Q71RC9 77 aa15.16■□□□□ 0.02
EFNA3-203ENST00000498667 MEGF6O75095 1541 aa15.16■□□□□ 0.02
EFNA3-203ENST00000498667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
EFNA3-203ENST00000498667 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
EFNA3-203ENST00000498667 EVC2Q86UK5 1308 aa15.15■□□□□ 0.02
EFNA3-203ENST00000498667 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
EFNA3-203ENST00000498667 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
EFNA3-203ENST00000498667 NME9Q86XW9 330 aa15.14■□□□□ 0.01
EFNA3-203ENST00000498667 LTV1Q96GA3 475 aaPredicted RBP15.14■□□□□ 0.01
EFNA3-203ENST00000498667 BRCA1P38398 1863 aaKnown RBP15.13■□□□□ 0.01
EFNA3-203ENST00000498667 FLAD1Q8NFF5 587 aa15.13■□□□□ 0.01
EFNA3-203ENST00000498667 PHF14O94880 888 aa15.12■□□□□ 0.01
EFNA3-203ENST00000498667 HSPA1AP0DMV8 641 aaKnown RBP15.12■□□□□ 0.01
EFNA3-203ENST00000498667 HSPA1BP0DMV9 641 aaKnown RBP15.12■□□□□ 0.01
EFNA3-203ENST00000498667 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
EFNA3-203ENST00000498667 C16orf71Q8IYS4 520 aaPredicted RBP15.11■□□□□ 0.01
EFNA3-203ENST00000498667 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
EFNA3-203ENST00000498667 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
EFNA3-203ENST00000498667 TNRC6CQ9HCJ0 1690 aaKnown RBP15.1■□□□□ 0.01
EFNA3-203ENST00000498667 CD163L1Q9NR16 1453 aa15.1■□□□□ 0.01
EFNA3-203ENST00000498667 FSTL1Q12841 308 aa15.1■□□□□ 0.01
EFNA3-203ENST00000498667 ZCRB1Q8TBF4 217 aaKnown RBP15.1■□□□□ 0.01
EFNA3-203ENST00000498667 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
EFNA3-203ENST00000498667 ITGB4P16144 1822 aa15.1■□□□□ 0.01
EFNA3-203ENST00000498667 AK7Q96M32 723 aa15.09■□□□□ 0.01
EFNA3-203ENST00000498667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0
EFNA3-203ENST00000498667 ARHGAP27Q6ZUM4 889 aa15.08■□□□□ 0
EFNA3-203ENST00000498667 IP6K1Q92551 441 aa15.08■□□□□ 0
EFNA3-203ENST00000498667 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
EFNA3-203ENST00000498667 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0
EFNA3-203ENST00000498667 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
EFNA3-203ENST00000498667 PLEKHG2Q9H7P9 1386 aa15.06■□□□□ 0
EFNA3-203ENST00000498667 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
EFNA3-203ENST00000498667 NSD3Q9BZ95 1437 aa15.05■□□□□ -0
EFNA3-203ENST00000498667 A0A0G2JLW4 131 aa15.04■□□□□ -0
EFNA3-203ENST00000498667 SBF1O95248 1867 aa15.03■□□□□ -0
EFNA3-203ENST00000498667 MMP10P09238 476 aa15.03■□□□□ -0
EFNA3-203ENST00000498667 SSFA2P28290 1259 aa15.03■□□□□ -0
EFNA3-203ENST00000498667 RRAGCQ9HB90 399 aa15.03■□□□□ -0
EFNA3-203ENST00000498667 EDC4Q6P2E9 1401 aaKnown RBP15.02■□□□□ -0
EFNA3-203ENST00000498667 FCHSD2O94868 740 aa15.02■□□□□ -0
EFNA3-203ENST00000498667 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
EFNA3-203ENST00000498667 USHBP1Q8N6Y0 703 aa15.02■□□□□ -0
EFNA3-203ENST00000498667 LINC00116Q8NCU8 138 aa15.02■□□□□ -0
EFNA3-203ENST00000498667 C4AP0C0L4 1744 aa15.02□□□□□ -0.01
EFNA3-203ENST00000498667 KDM2BQ8NHM5 1336 aa15.01□□□□□ -0.01
EFNA3-203ENST00000498667 DPEP1P16444 411 aa15.01□□□□□ -0.01
EFNA3-203ENST00000498667 HOXC9P31274 260 aa15.01□□□□□ -0.01
EFNA3-203ENST00000498667 SMC1BQ8NDV3 1235 aa15.01□□□□□ -0.01
EFNA3-203ENST00000498667 MAP3K19Q56UN5 1328 aa15□□□□□ -0.01
EFNA3-203ENST00000498667 TGFB2P61812 414 aa15□□□□□ -0.01
EFNA3-203ENST00000498667 FBLN1P23142 703 aa14.99□□□□□ -0.01
EFNA3-203ENST00000498667 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
EFNA3-203ENST00000498667 A0A1W2PP64 1363 aa14.98□□□□□ -0.01
EFNA3-203ENST00000498667 GNPATO15228 680 aa14.98□□□□□ -0.01
EFNA3-203ENST00000498667 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
EFNA3-203ENST00000498667 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
EFNA3-203ENST00000498667 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
EFNA3-203ENST00000498667 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
EFNA3-203ENST00000498667 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
EFNA3-203ENST00000498667 SMARCC1Q92922 1105 aaPredicted RBP14.97□□□□□ -0.01
EFNA3-203ENST00000498667 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
EFNA3-203ENST00000498667 KCNA3P22001 575 aa14.96□□□□□ -0.01
EFNA3-203ENST00000498667 AMPHP49418 695 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms