RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 TTC24A2A3L6 582 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-221ENST00000497703 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
GARNL3-221ENST00000497703 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-221ENST00000497703 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
GARNL3-221ENST00000497703 CYP4X1Q8N118 509 aa12.86□□□□□ -0.35
GARNL3-221ENST00000497703 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-221ENST00000497703 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
GARNL3-221ENST00000497703 MYT1Q01538 1121 aa12.85□□□□□ -0.35
GARNL3-221ENST00000497703 PTK7Q13308 1070 aa12.85□□□□□ -0.35
GARNL3-221ENST00000497703 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-221ENST00000497703 ANKMY2Q8IV38 441 aa12.84□□□□□ -0.35
GARNL3-221ENST00000497703 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
GARNL3-221ENST00000497703 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
GARNL3-221ENST00000497703 PKD2L1Q9P0L9 805 aa12.83□□□□□ -0.36
GARNL3-221ENST00000497703 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
GARNL3-221ENST00000497703 CLDN10P78369 228 aa12.82□□□□□ -0.36
GARNL3-221ENST00000497703 NNTQ13423 1086 aa12.82□□□□□ -0.36
GARNL3-221ENST00000497703 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
GARNL3-221ENST00000497703 ZBTB7CA1YPR0 619 aa12.81□□□□□ -0.36
GARNL3-221ENST00000497703 DPYDQ12882 1025 aa12.81□□□□□ -0.36
GARNL3-221ENST00000497703 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
GARNL3-221ENST00000497703 SIX5Q8N196 739 aa12.81□□□□□ -0.36
GARNL3-221ENST00000497703 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
GARNL3-221ENST00000497703 TMPRSS4Q9NRS4 437 aa12.81□□□□□ -0.36
GARNL3-221ENST00000497703 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
GARNL3-221ENST00000497703 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
GARNL3-221ENST00000497703 TPCN2Q8NHX9 752 aa12.8□□□□□ -0.36
GARNL3-221ENST00000497703 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
GARNL3-221ENST00000497703 RGS20O76081 388 aa12.79□□□□□ -0.36
GARNL3-221ENST00000497703 SCTRP47872 440 aa12.79□□□□□ -0.36
GARNL3-221ENST00000497703 SEC13P55735 322 aa12.79□□□□□ -0.36
GARNL3-221ENST00000497703 TMEM164Q5U3C3 297 aa12.79□□□□□ -0.36
GARNL3-221ENST00000497703 STK32AQ8WU08 396 aa12.79□□□□□ -0.36
GARNL3-221ENST00000497703 ZMIZ1Q9ULJ6 1067 aa12.79□□□□□ -0.36
GARNL3-221ENST00000497703 NR3C2P08235 984 aa12.78□□□□□ -0.36
GARNL3-221ENST00000497703 PCDHGA11Q9Y5H2 935 aa12.78□□□□□ -0.36
GARNL3-221ENST00000497703 GDF9O60383 454 aa12.77□□□□□ -0.37
GARNL3-221ENST00000497703 AEBP1Q8IUX7 1158 aa12.77□□□□□ -0.37
GARNL3-221ENST00000497703 PRR20EP86478 221 aa12.76□□□□□ -0.37
GARNL3-221ENST00000497703 PRR20CP86479 221 aa12.76□□□□□ -0.37
GARNL3-221ENST00000497703 PRR20DP86480 221 aa12.76□□□□□ -0.37
GARNL3-221ENST00000497703 PRR20BP86481 221 aa12.76□□□□□ -0.37
GARNL3-221ENST00000497703 PRR20AP86496 221 aa12.76□□□□□ -0.37
GARNL3-221ENST00000497703 SWI5Q1ZZU3 235 aa12.76□□□□□ -0.37
GARNL3-221ENST00000497703 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
GARNL3-221ENST00000497703 BRD1O95696 1058 aa12.75□□□□□ -0.37
GARNL3-221ENST00000497703 KIAA1024Q9UPX6 916 aa12.75□□□□□ -0.37
GARNL3-221ENST00000497703 ZBTB7BO15156 539 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-221ENST00000497703 ESCO1Q5FWF5 840 aa12.74□□□□□ -0.37
GARNL3-221ENST00000497703 OSBPL3Q9H4L5 887 aa12.74□□□□□ -0.37
GARNL3-221ENST00000497703 J3QL48 77 aa12.73□□□□□ -0.37
GARNL3-221ENST00000497703 BACH1O14867 736 aa12.73□□□□□ -0.37
GARNL3-221ENST00000497703 GNRH1P01148 92 aa12.73□□□□□ -0.37
GARNL3-221ENST00000497703 WDR4P57081 412 aaKnown RBP12.73□□□□□ -0.37
GARNL3-221ENST00000497703 TOR4AQ9NXH8 423 aa12.73□□□□□ -0.37
GARNL3-221ENST00000497703 LILRA1O75019 489 aa12.72□□□□□ -0.37
GARNL3-221ENST00000497703 ZIC2O95409 532 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-221ENST00000497703 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
GARNL3-221ENST00000497703 SFI1A8K8P3 1242 aa12.71□□□□□ -0.37
GARNL3-221ENST00000497703 M0R2N6 131 aa12.7□□□□□ -0.38
GARNL3-221ENST00000497703 GDF10P55107 478 aa12.7□□□□□ -0.38
GARNL3-221ENST00000497703 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
GARNL3-221ENST00000497703 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
GARNL3-221ENST00000497703 CARNS1A5YM72 827 aa12.69□□□□□ -0.38
GARNL3-221ENST00000497703 ADH1AP07327 375 aa12.69□□□□□ -0.38
GARNL3-221ENST00000497703 KCNA1Q09470 495 aa12.69□□□□□ -0.38
GARNL3-221ENST00000497703 ITPKCQ96DU7 683 aa12.69□□□□□ -0.38
GARNL3-221ENST00000497703 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
GARNL3-221ENST00000497703 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
GARNL3-221ENST00000497703 INHAP05111 366 aa12.67□□□□□ -0.38
GARNL3-221ENST00000497703 SMPD1P17405 629 aa12.67□□□□□ -0.38
GARNL3-221ENST00000497703 ADD1P35611 737 aaKnown RBP12.67□□□□□ -0.38
GARNL3-221ENST00000497703 ZNF358Q9NW07 568 aa12.67□□□□□ -0.38
GARNL3-221ENST00000497703 DKK1O94907 266 aa12.66□□□□□ -0.38
GARNL3-221ENST00000497703 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
GARNL3-221ENST00000497703 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-221ENST00000497703 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
GARNL3-221ENST00000497703 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
GARNL3-221ENST00000497703 UPP2O95045 317 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 TIMP2P16035 220 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 SCNN1DP51172 638 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 FAM69CQ0P6D2 419 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 CBLBQ13191 982 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 Q6ZVU0 165 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
GARNL3-221ENST00000497703 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 ETNK1Q9HBU6 452 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 SERTAD1Q9UHV2 236 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
GARNL3-221ENST00000497703 TMEM229AB2RXF0 380 aa12.63□□□□□ -0.39
GARNL3-221ENST00000497703 PRMT3O60678 531 aa12.63□□□□□ -0.39
GARNL3-221ENST00000497703 KLF16Q9BXK1 252 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-221ENST00000497703 RAB6BQ9NRW1 208 aa12.63□□□□□ -0.39
GARNL3-221ENST00000497703 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-221ENST00000497703 HPS1Q92902 700 aa12.62□□□□□ -0.39
GARNL3-221ENST00000497703 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-221ENST00000497703 PTGIRP43119 386 aa12.61□□□□□ -0.39
GARNL3-221ENST00000497703 RELBQ01201 579 aa12.61□□□□□ -0.39
GARNL3-221ENST00000497703 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms