RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 TECPR2O15040 1411 aa20.33■□□□□ 0.85
PCBP4-216ENST00000497390 GOLGA6L3A6NEY3 463 aa20.33■□□□□ 0.85
PCBP4-216ENST00000497390 CEBPAP49715 358 aaPredicted RBP20.33■□□□□ 0.85
PCBP4-216ENST00000497390 NRKQ7Z2Y5 1582 aa20.33■□□□□ 0.84
PCBP4-216ENST00000497390 ADAMTS13Q76LX8 1427 aa20.33■□□□□ 0.84
PCBP4-216ENST00000497390 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
PCBP4-216ENST00000497390 CEP85Q6P2H3 762 aa20.32■□□□□ 0.84
PCBP4-216ENST00000497390 MAP3K19Q56UN5 1328 aa20.31■□□□□ 0.84
PCBP4-216ENST00000497390 CDC45O75419 566 aa20.31■□□□□ 0.84
PCBP4-216ENST00000497390 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
PCBP4-216ENST00000497390 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
PCBP4-216ENST00000497390 TMEM2Q9UHN6 1383 aa20.31■□□□□ 0.84
PCBP4-216ENST00000497390 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
PCBP4-216ENST00000497390 HSP90AA1P07900 732 aaKnown RBP20.3■□□□□ 0.84
PCBP4-216ENST00000497390 SSFA2P28290 1259 aa20.3■□□□□ 0.84
PCBP4-216ENST00000497390 TTC22Q5TAA0 569 aa20.3■□□□□ 0.84
PCBP4-216ENST00000497390 TNRQ92752 1358 aa20.3■□□□□ 0.84
PCBP4-216ENST00000497390 K7ELQ4 463 aaPredicted RBP20.29■□□□□ 0.84
PCBP4-216ENST00000497390 RAB3GAP1Q15042 981 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
PCBP4-216ENST00000497390 L1TD1Q5T7N2 865 aaKnown RBP20.29■□□□□ 0.84
PCBP4-216ENST00000497390 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 SLC4A10Q6U841 1118 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 GAS2L3Q86XJ1 694 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 CHMP4BQ9H444 224 aaKnown RBP20.29■□□□□ 0.84
PCBP4-216ENST00000497390 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
PCBP4-216ENST00000497390 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
PCBP4-216ENST00000497390 USP6P35125 1406 aa20.28■□□□□ 0.84
PCBP4-216ENST00000497390 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
PCBP4-216ENST00000497390 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
PCBP4-216ENST00000497390 CRB1P82279 1406 aa20.28■□□□□ 0.84
PCBP4-216ENST00000497390 SDSP20132 328 aa20.27■□□□□ 0.84
PCBP4-216ENST00000497390 RGPD8O14715 1765 aaPredicted RBP20.27■□□□□ 0.83
PCBP4-216ENST00000497390 NUTM2GQ5VZR2 741 aa20.26■□□□□ 0.83
PCBP4-216ENST00000497390 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
PCBP4-216ENST00000497390 PKP1Q13835 747 aa20.26■□□□□ 0.83
PCBP4-216ENST00000497390 SIRT1Q96EB6 747 aa20.25■□□□□ 0.83
PCBP4-216ENST00000497390 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
PCBP4-216ENST00000497390 TOPAZ1Q8N9V7 1692 aa20.25■□□□□ 0.83
PCBP4-216ENST00000497390 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
PCBP4-216ENST00000497390 CEP170BQ9Y4F5 1589 aaPredicted RBP20.23■□□□□ 0.83
PCBP4-216ENST00000497390 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
PCBP4-216ENST00000497390 NALCNQ8IZF0 1738 aa20.23■□□□□ 0.83
PCBP4-216ENST00000497390 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
PCBP4-216ENST00000497390 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
PCBP4-216ENST00000497390 EYA1Q99502 592 aa20.22■□□□□ 0.83
PCBP4-216ENST00000497390 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
PCBP4-216ENST00000497390 EXOC6BQ9Y2D4 811 aa20.22■□□□□ 0.83
PCBP4-216ENST00000497390 GRPEL1Q9HAV7 217 aa20.21■□□□□ 0.83
PCBP4-216ENST00000497390 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
PCBP4-216ENST00000497390 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
PCBP4-216ENST00000497390 RPAP2Q8IXW5 612 aaPredicted RBP20.21■□□□□ 0.83
PCBP4-216ENST00000497390 HDGFP51858 240 aaKnown RBP20.2■□□□□ 0.82
PCBP4-216ENST00000497390 USP31Q70CQ4 1352 aa20.2■□□□□ 0.82
PCBP4-216ENST00000497390 SSH2Q76I76 1423 aa20.2■□□□□ 0.82
PCBP4-216ENST00000497390 CIZ1Q9ULV3 898 aaPredicted RBP20.19■□□□□ 0.82
PCBP4-216ENST00000497390 AMOTL2Q9Y2J4 779 aa20.19■□□□□ 0.82
PCBP4-216ENST00000497390 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
PCBP4-216ENST00000497390 FMN2Q9NZ56 1722 aa20.18■□□□□ 0.82
PCBP4-216ENST00000497390 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
PCBP4-216ENST00000497390 PTPRCP08575 1304 aa20.18■□□□□ 0.82
PCBP4-216ENST00000497390 GBP4Q96PP9 640 aa20.17■□□□□ 0.82
PCBP4-216ENST00000497390 NGDNQ8NEJ9 315 aaKnown RBP20.17■□□□□ 0.82
PCBP4-216ENST00000497390 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
PCBP4-216ENST00000497390 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
PCBP4-216ENST00000497390 AMPHP49418 695 aa20.16■□□□□ 0.82
PCBP4-216ENST00000497390 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
PCBP4-216ENST00000497390 MRE11P49959 708 aa20.16■□□□□ 0.82
PCBP4-216ENST00000497390 BAG4O95429 457 aaKnown RBP20.15■□□□□ 0.82
PCBP4-216ENST00000497390 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
PCBP4-216ENST00000497390 ERBB4Q15303 1308 aa20.15■□□□□ 0.82
PCBP4-216ENST00000497390 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
PCBP4-216ENST00000497390 RABEP1Q15276 862 aa20.14■□□□□ 0.82
PCBP4-216ENST00000497390 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
PCBP4-216ENST00000497390 PDE1AP54750 535 aa20.14■□□□□ 0.81
PCBP4-216ENST00000497390 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
PCBP4-216ENST00000497390 FLT4P35916 1363 aa20.13■□□□□ 0.81
PCBP4-216ENST00000497390 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
PCBP4-216ENST00000497390 NLRP6P59044 892 aa20.12■□□□□ 0.81
PCBP4-216ENST00000497390 FKBP5Q13451 457 aaPredicted RBP20.12■□□□□ 0.81
PCBP4-216ENST00000497390 RBM33Q96EV2 1170 aaKnown RBP20.12■□□□□ 0.81
PCBP4-216ENST00000497390 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
PCBP4-216ENST00000497390 MCTP1Q6DN14 999 aa20.12■□□□□ 0.81
PCBP4-216ENST00000497390 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
PCBP4-216ENST00000497390 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
PCBP4-216ENST00000497390 SBNO1A3KN83 1393 aa20.12■□□□□ 0.81
PCBP4-216ENST00000497390 KDRP35968 1356 aa20.12■□□□□ 0.81
PCBP4-216ENST00000497390 FLIIQ13045 1269 aa20.11■□□□□ 0.81
PCBP4-216ENST00000497390 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
PCBP4-216ENST00000497390 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
PCBP4-216ENST00000497390 PALD1Q9ULE6 856 aa20.1■□□□□ 0.81
PCBP4-216ENST00000497390 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
PCBP4-216ENST00000497390 DDX49Q9Y6V7 483 aaKnown RBP20.1■□□□□ 0.81
PCBP4-216ENST00000497390 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
PCBP4-216ENST00000497390 IL25Q9H293 177 aa20.09■□□□□ 0.81
PCBP4-216ENST00000497390 HAP1P54257 671 aaPredicted RBP20.08■□□□□ 0.81
PCBP4-216ENST00000497390 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
PCBP4-216ENST00000497390 GNAI2P04899 355 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms