RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 KCNQ2O43526 872 aa22.01■■□□□ 1.11
DNMT3A-215ENST00000496570 ZCRB1Q8TBF4 217 aaKnown RBP22.01■■□□□ 1.11
DNMT3A-215ENST00000496570 PKD1L3Q7Z443 1732 aa22■■□□□ 1.11
DNMT3A-215ENST00000496570 RGPD3A6NKT7 1758 aaPredicted RBP22■■□□□ 1.11
DNMT3A-215ENST00000496570 RGPD4Q7Z3J3 1758 aa22■■□□□ 1.11
DNMT3A-215ENST00000496570 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
DNMT3A-215ENST00000496570 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
DNMT3A-215ENST00000496570 NUP188Q5SRE5 1749 aa21.98■■□□□ 1.11
DNMT3A-215ENST00000496570 RAPGEF4Q8WZA2 1011 aa21.98■■□□□ 1.11
DNMT3A-215ENST00000496570 IGSF1Q8N6C5 1336 aa21.98■■□□□ 1.11
DNMT3A-215ENST00000496570 TATP17735 454 aaPredicted RBP21.97■■□□□ 1.11
DNMT3A-215ENST00000496570 ACSBG1Q96GR2 724 aa21.97■■□□□ 1.11
DNMT3A-215ENST00000496570 MTHFSP49914 203 aa21.96■■□□□ 1.11
DNMT3A-215ENST00000496570 DOT1LQ8TEK3 1739 aa21.95■■□□□ 1.1
DNMT3A-215ENST00000496570 PLSCR1O15162 318 aa21.95■■□□□ 1.1
DNMT3A-215ENST00000496570 BTAF1O14981 1849 aa21.94■■□□□ 1.1
DNMT3A-215ENST00000496570 IL13P35225 146 aa21.94■■□□□ 1.1
DNMT3A-215ENST00000496570 CYP27B1O15528 508 aa21.93■■□□□ 1.1
DNMT3A-215ENST00000496570 PROM2Q8N271 834 aa21.93■■□□□ 1.1
DNMT3A-215ENST00000496570 COL3A1P02461 1466 aaPredicted RBP21.92■■□□□ 1.1
DNMT3A-215ENST00000496570 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
DNMT3A-215ENST00000496570 PCDH11XQ9BZA7 1347 aa21.91■■□□□ 1.1
DNMT3A-215ENST00000496570 PCDH11YQ9BZA8 1340 aa21.91■■□□□ 1.1
DNMT3A-215ENST00000496570 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
DNMT3A-215ENST00000496570 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
DNMT3A-215ENST00000496570 PLEKHG2Q9H7P9 1386 aa21.89■■□□□ 1.1
DNMT3A-215ENST00000496570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
DNMT3A-215ENST00000496570 KDRP35968 1356 aa21.88■■□□□ 1.09
DNMT3A-215ENST00000496570 SRCAPQ6ZRS2 3230 aa21.88■■□□□ 1.09
DNMT3A-215ENST00000496570 PRIM1P49642 420 aaKnown RBP21.88■■□□□ 1.09
DNMT3A-215ENST00000496570 PSDA5PKW4 1024 aaPredicted RBP21.86■■□□□ 1.09
DNMT3A-215ENST00000496570 NKX1-1Q15270 411 aaPredicted RBP21.86■■□□□ 1.09
DNMT3A-215ENST00000496570 SPG7Q9UQ90 795 aa21.86■■□□□ 1.09
DNMT3A-215ENST00000496570 KAT6BQ8WYB5 2073 aa21.85■■□□□ 1.09
DNMT3A-215ENST00000496570 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
DNMT3A-215ENST00000496570 TXNRD1Q16881 649 aa21.85■■□□□ 1.09
DNMT3A-215ENST00000496570 R3HDM1Q15032 1099 aaKnown RBP21.84■■□□□ 1.09
DNMT3A-215ENST00000496570 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
DNMT3A-215ENST00000496570 PHKG2P15735 406 aa21.83■■□□□ 1.09
DNMT3A-215ENST00000496570 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
DNMT3A-215ENST00000496570 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
DNMT3A-215ENST00000496570 ITGB4P16144 1822 aa21.83■■□□□ 1.08
DNMT3A-215ENST00000496570 DIAPH1O60610 1272 aaKnown RBP21.82■■□□□ 1.08
DNMT3A-215ENST00000496570 PPP2R1AP30153 589 aa21.82■■□□□ 1.08
DNMT3A-215ENST00000496570 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
DNMT3A-215ENST00000496570 LY75O60449 1722 aa21.82■■□□□ 1.08
DNMT3A-215ENST00000496570 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
DNMT3A-215ENST00000496570 DDX10Q13206 875 aaKnown RBP21.79■■□□□ 1.08
DNMT3A-215ENST00000496570 IFNL2Q8IZJ0 200 aa21.79■■□□□ 1.08
DNMT3A-215ENST00000496570 HMOX1P09601 288 aa21.77■■□□□ 1.08
DNMT3A-215ENST00000496570 PLEKHO1Q53GL0 409 aaPredicted RBP21.77■■□□□ 1.08
DNMT3A-215ENST00000496570 NBPF14Q5TI25 921 aa21.77■■□□□ 1.08
DNMT3A-215ENST00000496570 KDM6AO15550 1401 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-215ENST00000496570 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
DNMT3A-215ENST00000496570 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
DNMT3A-215ENST00000496570 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
DNMT3A-215ENST00000496570 PIGBQ92521 554 aa21.75■■□□□ 1.07
DNMT3A-215ENST00000496570 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
DNMT3A-215ENST00000496570 LRP5O75197 1615 aa21.74■■□□□ 1.07
DNMT3A-215ENST00000496570 KCNQ4P56696 695 aa21.73■■□□□ 1.07
DNMT3A-215ENST00000496570 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
DNMT3A-215ENST00000496570 SLC15A2Q16348 729 aa21.71■■□□□ 1.07
DNMT3A-215ENST00000496570 ZNF827Q17R98 1081 aa21.71■■□□□ 1.07
DNMT3A-215ENST00000496570 DCAF5Q96JK2 942 aa21.71■■□□□ 1.07
DNMT3A-215ENST00000496570 PDGFDQ9GZP0 370 aaPredicted RBP21.71■■□□□ 1.07
DNMT3A-215ENST00000496570 U2SURPO15042 1029 aaKnown RBP21.7■■□□□ 1.06
DNMT3A-215ENST00000496570 CFAP53Q96M91 514 aa21.7■■□□□ 1.06
DNMT3A-215ENST00000496570 PALLDQ8WX93 1383 aa21.7■■□□□ 1.06
DNMT3A-215ENST00000496570 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
DNMT3A-215ENST00000496570 MTHFSDQ2M296 383 aaKnown RBP21.69■■□□□ 1.06
DNMT3A-215ENST00000496570 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
DNMT3A-215ENST00000496570 ADAMTS7Q9UKP4 1686 aa21.69■■□□□ 1.06
DNMT3A-215ENST00000496570 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
DNMT3A-215ENST00000496570 HSP90AB1P08238 724 aaKnown RBP21.68■■□□□ 1.06
DNMT3A-215ENST00000496570 STK32BQ9NY57 414 aa21.68■■□□□ 1.06
DNMT3A-215ENST00000496570 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
DNMT3A-215ENST00000496570 TUBGCP6Q96RT7 1819 aa21.67■■□□□ 1.06
DNMT3A-215ENST00000496570 RSPH6AQ9H0K4 717 aa21.67■■□□□ 1.06
DNMT3A-215ENST00000496570 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
DNMT3A-215ENST00000496570 ASAP1Q9ULH1 1129 aa21.67■■□□□ 1.06
DNMT3A-215ENST00000496570 TAF1LQ8IZX4 1826 aa21.66■■□□□ 1.06
DNMT3A-215ENST00000496570 C5P01031 1676 aa21.66■■□□□ 1.06
DNMT3A-215ENST00000496570 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
DNMT3A-215ENST00000496570 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
DNMT3A-215ENST00000496570 VIRMAQ69YN4 1812 aaKnown RBP21.65■■□□□ 1.06
DNMT3A-215ENST00000496570 RALBP1Q15311 655 aa21.65■■□□□ 1.06
DNMT3A-215ENST00000496570 ATG3Q9NT62 314 aa21.65■■□□□ 1.06
DNMT3A-215ENST00000496570 QSER1Q2KHR3 1735 aa21.65■■□□□ 1.06
DNMT3A-215ENST00000496570 SMARCC1Q92922 1105 aaPredicted RBP21.64■■□□□ 1.05
DNMT3A-215ENST00000496570 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
DNMT3A-215ENST00000496570 LGR6Q9HBX8 967 aa21.64■■□□□ 1.05
DNMT3A-215ENST00000496570 MRC1P22897 1456 aa21.64■■□□□ 1.05
DNMT3A-215ENST00000496570 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
DNMT3A-215ENST00000496570 PRKAR2BP31323 418 aa21.62■■□□□ 1.05
DNMT3A-215ENST00000496570 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
DNMT3A-215ENST00000496570 U2AF1L5P0DN76 240 aaPredicted RBP21.61■■□□□ 1.05
DNMT3A-215ENST00000496570 U2AF1Q01081 240 aaKnown RBP eCLIP21.61■■□□□ 1.05
DNMT3A-215ENST00000496570 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
DNMT3A-215ENST00000496570 LOC102724428A0A0B4J2F2 783 aa21.6■■□□□ 1.05
DNMT3A-215ENST00000496570 SIK1P57059 783 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 493.1 ms