RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 DDX10Q13206 875 aaKnown RBP30.73■■■□□ 2.51
CHRD-217ENST00000496527 IGSF1Q8N6C5 1336 aa30.73■■■□□ 2.51
CHRD-217ENST00000496527 SBF2Q86WG5 1849 aa30.7■■■□□ 2.51
CHRD-217ENST00000496527 IL13P35225 146 aa30.7■■■□□ 2.51
CHRD-217ENST00000496527 ACSBG1Q96GR2 724 aa30.7■■■□□ 2.51
CHRD-217ENST00000496527 PCDH11XQ9BZA7 1347 aa30.68■■■□□ 2.5
CHRD-217ENST00000496527 PCDH11YQ9BZA8 1340 aa30.68■■■□□ 2.5
CHRD-217ENST00000496527 EZH2Q15910 746 aaKnown RBP30.67■■■□□ 2.5
CHRD-217ENST00000496527 PTF1AQ7RTS3 328 aa30.67■■■□□ 2.5
CHRD-217ENST00000496527 CAMKK2Q96RR4 588 aa30.67■■■□□ 2.5
CHRD-217ENST00000496527 SPG7Q9UQ90 795 aa30.67■■■□□ 2.5
CHRD-217ENST00000496527 KCNQ2O43526 872 aa30.66■■■□□ 2.5
CHRD-217ENST00000496527 DIAPH1O60610 1272 aaKnown RBP30.66■■■□□ 2.5
CHRD-217ENST00000496527 SHANK3Q9BYB0 1731 aa30.64■■■□□ 2.5
CHRD-217ENST00000496527 PPP2R1AP30153 589 aa30.64■■■□□ 2.5
CHRD-217ENST00000496527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.64■■■□□ 2.5
CHRD-217ENST00000496527 PARD3Q8TEW0 1356 aa30.64■■■□□ 2.5
CHRD-217ENST00000496527 SULT6B1Q6IMI4 303 aa30.63■■■□□ 2.49
CHRD-217ENST00000496527 CFAP53Q96M91 514 aa30.62■■■□□ 2.49
CHRD-217ENST00000496527 PLSCR1O15162 318 aa30.61■■■□□ 2.49
CHRD-217ENST00000496527 CYP27B1O15528 508 aa30.61■■■□□ 2.49
CHRD-217ENST00000496527 AEBP1Q8IUX7 1158 aa30.61■■■□□ 2.49
CHRD-217ENST00000496527 NHSQ6T4R5 1651 aa30.6■■■□□ 2.49
CHRD-217ENST00000496527 KAT6BQ8WYB5 2073 aa30.6■■■□□ 2.49
CHRD-217ENST00000496527 PLEKHG2Q9H7P9 1386 aa30.6■■■□□ 2.49
CHRD-217ENST00000496527 PKD1L3Q7Z443 1732 aa30.59■■■□□ 2.49
CHRD-217ENST00000496527 SYTL4Q96C24 671 aaPredicted RBP30.59■■■□□ 2.49
CHRD-217ENST00000496527 PRIM1P49642 420 aaKnown RBP30.58■■■□□ 2.49
CHRD-217ENST00000496527 PLEKHO1Q53GL0 409 aaPredicted RBP30.57■■■□□ 2.48
CHRD-217ENST00000496527 KDRP35968 1356 aa30.56■■■□□ 2.48
CHRD-217ENST00000496527 COL3A1P02461 1466 aaPredicted RBP30.56■■■□□ 2.48
CHRD-217ENST00000496527 AMOTQ4VCS5 1084 aa30.55■■■□□ 2.48
CHRD-217ENST00000496527 IFNL2Q8IZJ0 200 aa30.55■■■□□ 2.48
CHRD-217ENST00000496527 U2SURPO15042 1029 aaKnown RBP30.54■■■□□ 2.48
CHRD-217ENST00000496527 HMOX1P09601 288 aa30.54■■■□□ 2.48
CHRD-217ENST00000496527 ZNF316A6NFI3 1004 aaPredicted RBP30.52■■■□□ 2.48
CHRD-217ENST00000496527 PHKG2P15735 406 aa30.52■■■□□ 2.48
CHRD-217ENST00000496527 NKX1-1Q15270 411 aaPredicted RBP30.52■■■□□ 2.48
CHRD-217ENST00000496527 RALBP1Q15311 655 aa30.52■■■□□ 2.48
CHRD-217ENST00000496527 DOT1LQ8TEK3 1739 aa30.52■■■□□ 2.48
CHRD-217ENST00000496527 NUDCQ9Y266 331 aa30.5■■■□□ 2.47
CHRD-217ENST00000496527 RGPD3A6NKT7 1758 aaPredicted RBP30.5■■■□□ 2.47
CHRD-217ENST00000496527 RGPD4Q7Z3J3 1758 aa30.5■■■□□ 2.47
CHRD-217ENST00000496527 ZNF530Q6P9A1 599 aaPredicted RBP30.49■■■□□ 2.47
CHRD-217ENST00000496527 BTAF1O14981 1849 aa30.49■■■□□ 2.47
CHRD-217ENST00000496527 TXNRD1Q16881 649 aa30.48■■■□□ 2.47
CHRD-217ENST00000496527 RREB1Q92766 1687 aa30.48■■■□□ 2.47
CHRD-217ENST00000496527 NBPF14Q5TI25 921 aa30.47■■■□□ 2.47
CHRD-217ENST00000496527 PROM2Q8N271 834 aa30.47■■■□□ 2.47
CHRD-217ENST00000496527 HSP90AB1P08238 724 aaKnown RBP30.46■■■□□ 2.47
CHRD-217ENST00000496527 C1orf141Q5JVX7 400 aa30.46■■■□□ 2.47
CHRD-217ENST00000496527 MPRIPQ6WCQ1 1025 aa30.45■■■□□ 2.47
CHRD-217ENST00000496527 NUP188Q5SRE5 1749 aa30.43■■■□□ 2.46
CHRD-217ENST00000496527 PSDA5PKW4 1024 aaPredicted RBP30.42■■■□□ 2.46
CHRD-217ENST00000496527 U2AF1L5P0DN76 240 aaPredicted RBP30.41■■■□□ 2.46
CHRD-217ENST00000496527 U2AF1Q01081 240 aaKnown RBP eCLIP30.41■■■□□ 2.46
CHRD-217ENST00000496527 R3HDM1Q15032 1099 aaKnown RBP30.41■■■□□ 2.46
CHRD-217ENST00000496527 DCAF5Q96JK2 942 aa30.41■■■□□ 2.46
CHRD-217ENST00000496527 TOGARAM1Q9Y4F4 1720 aa30.39■■■□□ 2.46
CHRD-217ENST00000496527 TMOD3Q9NYL9 352 aa30.39■■■□□ 2.46
CHRD-217ENST00000496527 PIGBQ92521 554 aa30.38■■■□□ 2.45
CHRD-217ENST00000496527 MYBBP1AQ9BQG0 1328 aaKnown RBP30.38■■■□□ 2.45
CHRD-217ENST00000496527 ERVV-2B6SEH9 535 aa30.37■■■□□ 2.45
CHRD-217ENST00000496527 MTHFSDQ2M296 383 aaKnown RBP30.37■■■□□ 2.45
CHRD-217ENST00000496527 AKAP4Q5JQC9 854 aa30.37■■■□□ 2.45
CHRD-217ENST00000496527 SLC27A3Q5K4L6 730 aa30.37■■■□□ 2.45
CHRD-217ENST00000496527 PRKAR2BP31323 418 aa30.35■■■□□ 2.45
CHRD-217ENST00000496527 RSPH6AQ9H0K4 717 aa30.35■■■□□ 2.45
CHRD-217ENST00000496527 ITGB4P16144 1822 aa30.35■■■□□ 2.45
CHRD-217ENST00000496527 SMARCC1Q92922 1105 aaPredicted RBP30.34■■■□□ 2.45
CHRD-217ENST00000496527 PRKRIP1Q9H875 184 aaPredicted RBP30.34■■■□□ 2.45
CHRD-217ENST00000496527 KDM6AO15550 1401 aaPredicted RBP30.33■■■□□ 2.45
CHRD-217ENST00000496527 FCHSD2O94868 740 aa30.33■■■□□ 2.45
CHRD-217ENST00000496527 ANO8Q9HCE9 1232 aaPredicted RBP30.33■■■□□ 2.45
CHRD-217ENST00000496527 LRRC4BQ9NT99 713 aa30.33■■■□□ 2.45
CHRD-217ENST00000496527 CABP4P57796 275 aa30.32■■■□□ 2.44
CHRD-217ENST00000496527 STK32BQ9NY57 414 aa30.32■■■□□ 2.44
CHRD-217ENST00000496527 PALLDQ8WX93 1383 aa30.31■■■□□ 2.44
CHRD-217ENST00000496527 GAS2L2Q8NHY3 880 aa30.31■■■□□ 2.44
CHRD-217ENST00000496527 CCNL1Q9UK58 526 aaPredicted RBP30.31■■■□□ 2.44
CHRD-217ENST00000496527 KCNQ4P56696 695 aa30.29■■■□□ 2.44
CHRD-217ENST00000496527 LY75O60449 1722 aa30.28■■■□□ 2.44
CHRD-217ENST00000496527 SLC15A2Q16348 729 aa30.28■■■□□ 2.44
CHRD-217ENST00000496527 PHACTR3Q96KR7 559 aa30.28■■■□□ 2.44
CHRD-217ENST00000496527 ASAP1Q9ULH1 1129 aa30.27■■■□□ 2.44
CHRD-217ENST00000496527 RNMTO43148 476 aaKnown RBP30.26■■■□□ 2.43
CHRD-217ENST00000496527 LGR6Q9HBX8 967 aa30.26■■■□□ 2.43
CHRD-217ENST00000496527 NFATC2IPQ8NCF5 419 aa30.25■■■□□ 2.43
CHRD-217ENST00000496527 NEFMP07197 916 aa30.24■■■□□ 2.43
CHRD-217ENST00000496527 HMGB2P26583 209 aaKnown RBP30.24■■■□□ 2.43
CHRD-217ENST00000496527 ATG3Q9NT62 314 aa30.24■■■□□ 2.43
CHRD-217ENST00000496527 GNAT3A8MTJ3 354 aa30.23■■■□□ 2.43
CHRD-217ENST00000496527 MAP3K5Q99683 1374 aa30.23■■■□□ 2.43
CHRD-217ENST00000496527 PAPPAQ13219 1627 aa30.22■■■□□ 2.43
CHRD-217ENST00000496527 SCN11AQ9UI33 1791 aa30.21■■■□□ 2.43
CHRD-217ENST00000496527 ZNF827Q17R98 1081 aa30.21■■■□□ 2.43
CHRD-217ENST00000496527 PNNQ9H307 717 aaKnown RBP30.21■■■□□ 2.43
CHRD-217ENST00000496527 SLC52A2Q9HAB3 445 aa30.21■■■□□ 2.43
CHRD-217ENST00000496527 LOC102724428A0A0B4J2F2 783 aa30.2■■■□□ 2.43
CHRD-217ENST00000496527 SIK1P57059 783 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms