RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 GCC1Q96CN9 775 aa18.75■□□□□ 0.59
UBXN11-216ENST00000496466 ARHGEF10O15013 1369 aa18.75■□□□□ 0.59
UBXN11-216ENST00000496466 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
UBXN11-216ENST00000496466 API5Q9BZZ5 524 aaKnown RBP18.75■□□□□ 0.59
UBXN11-216ENST00000496466 ZNF142P52746 1687 aaPredicted RBP18.75■□□□□ 0.59
UBXN11-216ENST00000496466 CHD2O14647 1828 aaKnown RBP18.75■□□□□ 0.59
UBXN11-216ENST00000496466 ABTB2Q8N961 1025 aa18.74■□□□□ 0.59
UBXN11-216ENST00000496466 FOXO3O43524 673 aa18.73■□□□□ 0.59
UBXN11-216ENST00000496466 ANKRD45Q5TZF3 282 aa18.73■□□□□ 0.59
UBXN11-216ENST00000496466 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
UBXN11-216ENST00000496466 EYA1Q99502 592 aa18.73■□□□□ 0.59
UBXN11-216ENST00000496466 PHF8Q9UPP1 1060 aa18.73■□□□□ 0.59
UBXN11-216ENST00000496466 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
UBXN11-216ENST00000496466 CHL1O00533 1208 aa18.72■□□□□ 0.59
UBXN11-216ENST00000496466 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
UBXN11-216ENST00000496466 C14orf37Q86TY3 774 aa18.71■□□□□ 0.59
UBXN11-216ENST00000496466 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
UBXN11-216ENST00000496466 BMP2KLQ5H9B9 411 aa18.71■□□□□ 0.58
UBXN11-216ENST00000496466 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
UBXN11-216ENST00000496466 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
UBXN11-216ENST00000496466 HOXC9P31274 260 aa18.7■□□□□ 0.58
UBXN11-216ENST00000496466 KDRP35968 1356 aa18.7■□□□□ 0.58
UBXN11-216ENST00000496466 CRB1P82279 1406 aa18.68■□□□□ 0.58
UBXN11-216ENST00000496466 RBM25P49756 843 aaKnown RBP18.68■□□□□ 0.58
UBXN11-216ENST00000496466 MIS18AQ9NYP9 233 aa18.68■□□□□ 0.58
UBXN11-216ENST00000496466 SETD1BQ9UPS6 1966 aaKnown RBP18.67■□□□□ 0.58
UBXN11-216ENST00000496466 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
UBXN11-216ENST00000496466 SPRYD3Q8NCJ5 442 aa18.67■□□□□ 0.58
UBXN11-216ENST00000496466 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
UBXN11-216ENST00000496466 INTS3Q68E01 1043 aaKnown RBP18.67■□□□□ 0.58
UBXN11-216ENST00000496466 IL27Q8NEV9 243 aa18.67■□□□□ 0.58
UBXN11-216ENST00000496466 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
UBXN11-216ENST00000496466 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
UBXN11-216ENST00000496466 KIAA0232Q92628 1395 aa18.66■□□□□ 0.58
UBXN11-216ENST00000496466 HAP1P54257 671 aaPredicted RBP18.66■□□□□ 0.58
UBXN11-216ENST00000496466 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
UBXN11-216ENST00000496466 RGS12O14924 1447 aa18.65■□□□□ 0.58
UBXN11-216ENST00000496466 USP54Q70EL1 1684 aa18.65■□□□□ 0.58
UBXN11-216ENST00000496466 PSME1Q06323 249 aa18.64■□□□□ 0.57
UBXN11-216ENST00000496466 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
UBXN11-216ENST00000496466 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
UBXN11-216ENST00000496466 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
UBXN11-216ENST00000496466 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
UBXN11-216ENST00000496466 CHMP5Q9NZZ3 219 aa18.62■□□□□ 0.57
UBXN11-216ENST00000496466 TSPYL4Q9UJ04 414 aa18.62■□□□□ 0.57
UBXN11-216ENST00000496466 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
UBXN11-216ENST00000496466 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
UBXN11-216ENST00000496466 SNX21Q969T3 373 aa18.61■□□□□ 0.57
UBXN11-216ENST00000496466 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
UBXN11-216ENST00000496466 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
UBXN11-216ENST00000496466 ANKRD44Q8N8A2 993 aa18.6■□□□□ 0.57
UBXN11-216ENST00000496466 PTPRCP08575 1304 aa18.6■□□□□ 0.57
UBXN11-216ENST00000496466 ATP10DQ9P241 1426 aa18.6■□□□□ 0.57
UBXN11-216ENST00000496466 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
UBXN11-216ENST00000496466 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
UBXN11-216ENST00000496466 KIF2CQ99661 725 aa18.58■□□□□ 0.57
UBXN11-216ENST00000496466 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
UBXN11-216ENST00000496466 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
UBXN11-216ENST00000496466 ZBTB7CA1YPR0 619 aa18.58■□□□□ 0.56
UBXN11-216ENST00000496466 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
UBXN11-216ENST00000496466 RPAP2Q8IXW5 612 aaPredicted RBP18.58■□□□□ 0.56
UBXN11-216ENST00000496466 IP6K1Q92551 441 aa18.58■□□□□ 0.56
UBXN11-216ENST00000496466 MCM4P33991 863 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 NFAT5O94916 1531 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 MSH6P52701 1360 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 LTN1O94822 1766 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
UBXN11-216ENST00000496466 CDC45O75419 566 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 PLEKHG5O94827 1062 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 GSPT1P15170 499 aaKnown RBP18.57■□□□□ 0.56
UBXN11-216ENST00000496466 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
UBXN11-216ENST00000496466 DDIT3P35638 169 aa18.56■□□□□ 0.56
UBXN11-216ENST00000496466 IL17REQ8NFR9 667 aa18.56■□□□□ 0.56
UBXN11-216ENST00000496466 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
UBXN11-216ENST00000496466 NBPF6Q5VWK0 638 aa18.55■□□□□ 0.56
UBXN11-216ENST00000496466 C16orf71Q8IYS4 520 aaPredicted RBP18.55■□□□□ 0.56
UBXN11-216ENST00000496466 NBPF4Q96M43 638 aa18.55■□□□□ 0.56
UBXN11-216ENST00000496466 MEIS3Q99687 375 aa18.55■□□□□ 0.56
UBXN11-216ENST00000496466 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
UBXN11-216ENST00000496466 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
UBXN11-216ENST00000496466 G2E3Q7L622 706 aa18.54■□□□□ 0.56
UBXN11-216ENST00000496466 KCNH5Q8NCM2 988 aa18.54■□□□□ 0.56
UBXN11-216ENST00000496466 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
UBXN11-216ENST00000496466 LMOD2Q6P5Q4 547 aa18.52■□□□□ 0.56
UBXN11-216ENST00000496466 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
UBXN11-216ENST00000496466 RTN4Q9NQC3 1192 aaKnown RBP18.51■□□□□ 0.55
UBXN11-216ENST00000496466 OTUD7AQ8TE49 926 aaPredicted RBP18.51■□□□□ 0.55
UBXN11-216ENST00000496466 UBE2Q2Q8WVN8 375 aa18.51■□□□□ 0.55
UBXN11-216ENST00000496466 LRRC59Q96AG4 307 aaKnown RBP18.51■□□□□ 0.55
UBXN11-216ENST00000496466 GCP02774 474 aa18.5■□□□□ 0.55
UBXN11-216ENST00000496466 CD2BP2O95400 341 aaKnown RBP18.5■□□□□ 0.55
UBXN11-216ENST00000496466 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
UBXN11-216ENST00000496466 F6X3S4 739 aa18.49■□□□□ 0.55
UBXN11-216ENST00000496466 SMARCA5O60264 1052 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-216ENST00000496466 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
UBXN11-216ENST00000496466 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
UBXN11-216ENST00000496466 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
UBXN11-216ENST00000496466 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
UBXN11-216ENST00000496466 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms