RNA–Protein interactions for RNA: ENST00000495998.1

SMO-204, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 732 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-204ENST00000495998 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
SMO-204ENST00000495998 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
SMO-204ENST00000495998 DDX54Q8TDD1 881 aaKnown RBP17.88■□□□□ 0.45
SMO-204ENST00000495998 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
SMO-204ENST00000495998 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
SMO-204ENST00000495998 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
SMO-204ENST00000495998 APBA3O96018 575 aa17.86■□□□□ 0.45
SMO-204ENST00000495998 EN1Q05925 392 aaPredicted RBP17.86■□□□□ 0.45
SMO-204ENST00000495998 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
SMO-204ENST00000495998 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
SMO-204ENST00000495998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMO-204ENST00000495998 KDRP35968 1356 aa17.86■□□□□ 0.45
SMO-204ENST00000495998 PARD3Q8TEW0 1356 aa17.86■□□□□ 0.45
SMO-204ENST00000495998 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
SMO-204ENST00000495998 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
SMO-204ENST00000495998 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
SMO-204ENST00000495998 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
SMO-204ENST00000495998 KCNQ2O43526 872 aa17.84■□□□□ 0.45
SMO-204ENST00000495998 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
SMO-204ENST00000495998 PLSCR1O15162 318 aa17.83■□□□□ 0.44
SMO-204ENST00000495998 CYP27B1O15528 508 aa17.83■□□□□ 0.44
SMO-204ENST00000495998 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.44
SMO-204ENST00000495998 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
SMO-204ENST00000495998 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
SMO-204ENST00000495998 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
SMO-204ENST00000495998 RGPD3A6NKT7 1758 aaPredicted RBP17.83■□□□□ 0.44
SMO-204ENST00000495998 RGPD4Q7Z3J3 1758 aa17.83■□□□□ 0.44
SMO-204ENST00000495998 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
SMO-204ENST00000495998 RREB1Q92766 1687 aa17.8■□□□□ 0.44
SMO-204ENST00000495998 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
SMO-204ENST00000495998 DOT1LQ8TEK3 1739 aa17.8■□□□□ 0.44
SMO-204ENST00000495998 CFAP53Q96M91 514 aa17.79■□□□□ 0.44
SMO-204ENST00000495998 BTAF1O14981 1849 aa17.79■□□□□ 0.44
SMO-204ENST00000495998 KAT6BQ8WYB5 2073 aa17.78■□□□□ 0.44
SMO-204ENST00000495998 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
SMO-204ENST00000495998 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
SMO-204ENST00000495998 RALBP1Q15311 655 aa17.78■□□□□ 0.44
SMO-204ENST00000495998 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
SMO-204ENST00000495998 PHKG2P15735 406 aa17.77■□□□□ 0.44
SMO-204ENST00000495998 PLEKHO1Q53GL0 409 aaPredicted RBP17.77■□□□□ 0.44
SMO-204ENST00000495998 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
SMO-204ENST00000495998 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
SMO-204ENST00000495998 TOGARAM1Q9Y4F4 1720 aa17.76■□□□□ 0.43
SMO-204ENST00000495998 HMOX1P09601 288 aa17.76■□□□□ 0.43
SMO-204ENST00000495998 PROM2Q8N271 834 aa17.76■□□□□ 0.43
SMO-204ENST00000495998 U2SURPO15042 1029 aaKnown RBP17.74■□□□□ 0.43
SMO-204ENST00000495998 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
SMO-204ENST00000495998 ZNF530Q6P9A1 599 aaPredicted RBP17.73■□□□□ 0.43
SMO-204ENST00000495998 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
SMO-204ENST00000495998 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
SMO-204ENST00000495998 ITGB4P16144 1822 aa17.72■□□□□ 0.43
SMO-204ENST00000495998 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
SMO-204ENST00000495998 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.42
SMO-204ENST00000495998 DCAF5Q96JK2 942 aa17.7■□□□□ 0.42
SMO-204ENST00000495998 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
SMO-204ENST00000495998 PRKRIP1Q9H875 184 aaPredicted RBP17.7■□□□□ 0.42
SMO-204ENST00000495998 KDM6AO15550 1401 aaPredicted RBP17.7■□□□□ 0.42
SMO-204ENST00000495998 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
SMO-204ENST00000495998 MPRIPQ6WCQ1 1025 aa17.69■□□□□ 0.42
SMO-204ENST00000495998 LY75O60449 1722 aa17.69■□□□□ 0.42
SMO-204ENST00000495998 ERVV-2B6SEH9 535 aa17.68■□□□□ 0.42
SMO-204ENST00000495998 MTHFSDQ2M296 383 aaKnown RBP17.68■□□□□ 0.42
SMO-204ENST00000495998 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
SMO-204ENST00000495998 PIGBQ92521 554 aa17.68■□□□□ 0.42
SMO-204ENST00000495998 FCHSD2O94868 740 aa17.67■□□□□ 0.42
SMO-204ENST00000495998 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
SMO-204ENST00000495998 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
SMO-204ENST00000495998 SLC27A3Q5K4L6 730 aa17.67■□□□□ 0.42
SMO-204ENST00000495998 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
SMO-204ENST00000495998 LRRC4BQ9NT99 713 aa17.67■□□□□ 0.42
SMO-204ENST00000495998 PAPPAQ13219 1627 aa17.66■□□□□ 0.42
SMO-204ENST00000495998 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
SMO-204ENST00000495998 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
SMO-204ENST00000495998 PSDA5PKW4 1024 aaPredicted RBP17.65■□□□□ 0.42
SMO-204ENST00000495998 R3HDM1Q15032 1099 aaKnown RBP17.65■□□□□ 0.42
SMO-204ENST00000495998 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
SMO-204ENST00000495998 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
SMO-204ENST00000495998 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.42
SMO-204ENST00000495998 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
SMO-204ENST00000495998 SMARCC1Q92922 1105 aaPredicted RBP17.64■□□□□ 0.41
SMO-204ENST00000495998 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
SMO-204ENST00000495998 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
SMO-204ENST00000495998 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
SMO-204ENST00000495998 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
SMO-204ENST00000495998 MRC1P22897 1456 aa17.62■□□□□ 0.41
SMO-204ENST00000495998 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
SMO-204ENST00000495998 CABP4P57796 275 aa17.61■□□□□ 0.41
SMO-204ENST00000495998 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
SMO-204ENST00000495998 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
SMO-204ENST00000495998 ATG3Q9NT62 314 aa17.61■□□□□ 0.41
SMO-204ENST00000495998 CCNL1Q9UK58 526 aaPredicted RBP17.61■□□□□ 0.41
SMO-204ENST00000495998 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
SMO-204ENST00000495998 KCNQ4P56696 695 aa17.6■□□□□ 0.41
SMO-204ENST00000495998 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
SMO-204ENST00000495998 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
SMO-204ENST00000495998 VIRMAQ69YN4 1812 aaKnown RBP17.6■□□□□ 0.41
SMO-204ENST00000495998 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
SMO-204ENST00000495998 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
SMO-204ENST00000495998 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
SMO-204ENST00000495998 SLC52A2Q9HAB3 445 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms