RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 PRELPP51888 382 aa14.82□□□□□ -0.04
C9orf78-207ENST00000495934 NBPF1Q3BBV0 1214 aa14.82□□□□□ -0.04
C9orf78-207ENST00000495934 TNS4Q8IZW8 715 aa14.82□□□□□ -0.04
C9orf78-207ENST00000495934 DDX54Q8TDD1 881 aaKnown RBP14.82□□□□□ -0.04
C9orf78-207ENST00000495934 CCNL1Q9UK58 526 aaPredicted RBP14.82□□□□□ -0.04
C9orf78-207ENST00000495934 WWC3Q9ULE0 1092 aa14.82□□□□□ -0.04
C9orf78-207ENST00000495934 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
C9orf78-207ENST00000495934 TOMM70O94826 608 aa14.81□□□□□ -0.04
C9orf78-207ENST00000495934 IGSF1Q8N6C5 1336 aa14.81□□□□□ -0.04
C9orf78-207ENST00000495934 PRIM1P49642 420 aaKnown RBP14.8□□□□□ -0.04
C9orf78-207ENST00000495934 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
C9orf78-207ENST00000495934 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
C9orf78-207ENST00000495934 NSD2O96028 1365 aa14.8□□□□□ -0.04
C9orf78-207ENST00000495934 ANKRD36BQ8N2N9 1353 aa14.8□□□□□ -0.04
C9orf78-207ENST00000495934 C5P01031 1676 aa14.78□□□□□ -0.04
C9orf78-207ENST00000495934 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
C9orf78-207ENST00000495934 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.04
C9orf78-207ENST00000495934 JMYQ8N9B5 988 aa14.77□□□□□ -0.05
C9orf78-207ENST00000495934 USP54Q70EL1 1684 aa14.77□□□□□ -0.05
C9orf78-207ENST00000495934 EVC2Q86UK5 1308 aa14.76□□□□□ -0.05
C9orf78-207ENST00000495934 HTRA3P83110 453 aa14.76□□□□□ -0.05
C9orf78-207ENST00000495934 TAF1LQ8IZX4 1826 aa14.76□□□□□ -0.05
C9orf78-207ENST00000495934 MON2Q7Z3U7 1717 aa14.75□□□□□ -0.05
C9orf78-207ENST00000495934 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
C9orf78-207ENST00000495934 USP47Q96K76 1375 aa14.75□□□□□ -0.05
C9orf78-207ENST00000495934 FAM208AQ9UK61 1670 aaKnown RBP14.75□□□□□ -0.05
C9orf78-207ENST00000495934 PCGF6Q9BYE7 350 aa14.75□□□□□ -0.05
C9orf78-207ENST00000495934 FLAD1Q8NFF5 587 aa14.74□□□□□ -0.05
C9orf78-207ENST00000495934 NMRK2Q9NPI5 230 aa14.74□□□□□ -0.05
C9orf78-207ENST00000495934 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
C9orf78-207ENST00000495934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.73□□□□□ -0.05
C9orf78-207ENST00000495934 RBM46Q8TBY0 533 aaKnown RBP14.73□□□□□ -0.05
C9orf78-207ENST00000495934 UBR3Q6ZT12 1888 aa14.7□□□□□ -0.06
C9orf78-207ENST00000495934 TOGARAM1Q9Y4F4 1720 aa14.7□□□□□ -0.06
C9orf78-207ENST00000495934 NME9Q86XW9 330 aa14.7□□□□□ -0.06
C9orf78-207ENST00000495934 LTV1Q96GA3 475 aaPredicted RBP14.7□□□□□ -0.06
C9orf78-207ENST00000495934 C4BP0C0L5 1744 aa14.69□□□□□ -0.06
C9orf78-207ENST00000495934 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
C9orf78-207ENST00000495934 ZCRB1Q8TBF4 217 aaKnown RBP14.69□□□□□ -0.06
C9orf78-207ENST00000495934 RGPD2P0DJD1 1756 aa14.68□□□□□ -0.06
C9orf78-207ENST00000495934 SLC34A2O95436 690 aa14.68□□□□□ -0.06
C9orf78-207ENST00000495934 HMGB2P26583 209 aaKnown RBP14.68□□□□□ -0.06
C9orf78-207ENST00000495934 AMIGO3Q86WK7 504 aa14.68□□□□□ -0.06
C9orf78-207ENST00000495934 N4BP2Q86UW6 1770 aaPredicted RBP14.68□□□□□ -0.06
C9orf78-207ENST00000495934 MEGF6O75095 1541 aa14.67□□□□□ -0.06
C9orf78-207ENST00000495934 PHF14O94880 888 aa14.67□□□□□ -0.06
C9orf78-207ENST00000495934 FSTL1Q12841 308 aa14.67□□□□□ -0.06
C9orf78-207ENST00000495934 AK7Q96M32 723 aa14.67□□□□□ -0.06
C9orf78-207ENST00000495934 KIAA1551Q9HCM1 1747 aa14.66□□□□□ -0.06
C9orf78-207ENST00000495934 PXDNLA1KZ92 1463 aa14.66□□□□□ -0.06
C9orf78-207ENST00000495934 PALLDQ8WX93 1383 aa14.66□□□□□ -0.06
C9orf78-207ENST00000495934 SBNO2Q9Y2G9 1366 aa14.66□□□□□ -0.06
C9orf78-207ENST00000495934 IP6K1Q92551 441 aa14.66□□□□□ -0.06
C9orf78-207ENST00000495934 KIF13BQ9NQT8 1826 aa14.66□□□□□ -0.06
C9orf78-207ENST00000495934 SMIM5Q71RC9 77 aa14.65□□□□□ -0.06
C9orf78-207ENST00000495934 BCS1LQ9Y276 419 aa14.65□□□□□ -0.06
C9orf78-207ENST00000495934 NSD3Q9BZ95 1437 aa14.65□□□□□ -0.06
C9orf78-207ENST00000495934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
C9orf78-207ENST00000495934 HSPA1AP0DMV8 641 aaKnown RBP14.64□□□□□ -0.07
C9orf78-207ENST00000495934 HSPA1BP0DMV9 641 aaKnown RBP14.64□□□□□ -0.07
C9orf78-207ENST00000495934 ARHGAP27Q6ZUM4 889 aa14.64□□□□□ -0.07
C9orf78-207ENST00000495934 PKD1L3Q7Z443 1732 aa14.63□□□□□ -0.07
C9orf78-207ENST00000495934 CD163L1Q9NR16 1453 aa14.63□□□□□ -0.07
C9orf78-207ENST00000495934 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
C9orf78-207ENST00000495934 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
C9orf78-207ENST00000495934 SSFA2P28290 1259 aa14.61□□□□□ -0.07
C9orf78-207ENST00000495934 C9orf131Q5VYM1 1079 aa14.61□□□□□ -0.07
C9orf78-207ENST00000495934 ITGB4P16144 1822 aa14.61□□□□□ -0.07
C9orf78-207ENST00000495934 TNRC6CQ9HCJ0 1690 aaKnown RBP14.61□□□□□ -0.07
C9orf78-207ENST00000495934 BRCA1P38398 1863 aaKnown RBP14.61□□□□□ -0.07
C9orf78-207ENST00000495934 EDC4Q6P2E9 1401 aaKnown RBP14.6□□□□□ -0.07
C9orf78-207ENST00000495934 A0A0G2JLW4 131 aa14.6□□□□□ -0.07
C9orf78-207ENST00000495934 MMP10P09238 476 aa14.6□□□□□ -0.07
C9orf78-207ENST00000495934 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
C9orf78-207ENST00000495934 ARFGEF1Q9Y6D6 1849 aa14.59□□□□□ -0.07
C9orf78-207ENST00000495934 C10orf71Q711Q0 1435 aa14.59□□□□□ -0.07
C9orf78-207ENST00000495934 HOXC9P31274 260 aa14.59□□□□□ -0.07
C9orf78-207ENST00000495934 TGFB2P61812 414 aa14.59□□□□□ -0.07
C9orf78-207ENST00000495934 MPRIPQ6WCQ1 1025 aa14.59□□□□□ -0.07
C9orf78-207ENST00000495934 HDGFL2Q7Z4V5 671 aaPredicted RBP14.59□□□□□ -0.07
C9orf78-207ENST00000495934 SMARCC1Q92922 1105 aaPredicted RBP14.59□□□□□ -0.07
C9orf78-207ENST00000495934 SIN3AQ96ST3 1273 aa14.59□□□□□ -0.07
C9orf78-207ENST00000495934 FCHSD2O94868 740 aa14.58□□□□□ -0.08
C9orf78-207ENST00000495934 SMC1BQ8NDV3 1235 aa14.58□□□□□ -0.08
C9orf78-207ENST00000495934 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.08
C9orf78-207ENST00000495934 AMPHP49418 695 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 TMC1Q8TDI8 760 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 RRAGCQ9HB90 399 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 MAP3K19Q56UN5 1328 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 PCDH11XQ9BZA7 1347 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 PCDH11YQ9BZA8 1340 aa14.57□□□□□ -0.08
C9orf78-207ENST00000495934 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
C9orf78-207ENST00000495934 DPEP1P16444 411 aa14.56□□□□□ -0.08
C9orf78-207ENST00000495934 NBPF6Q5VWK0 638 aa14.56□□□□□ -0.08
C9orf78-207ENST00000495934 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
C9orf78-207ENST00000495934 LINC00116Q8NCU8 138 aa14.56□□□□□ -0.08
C9orf78-207ENST00000495934 NBPF4Q96M43 638 aa14.56□□□□□ -0.08
C9orf78-207ENST00000495934 GNPATO15228 680 aa14.55□□□□□ -0.08
C9orf78-207ENST00000495934 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms