RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 IGSF1Q8N6C5 1336 aa18.22■□□□□ 0.51
PSMB4-207ENST00000495805 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
PSMB4-207ENST00000495805 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
PSMB4-207ENST00000495805 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
PSMB4-207ENST00000495805 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
PSMB4-207ENST00000495805 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
PSMB4-207ENST00000495805 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
PSMB4-207ENST00000495805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.2■□□□□ 0.5
PSMB4-207ENST00000495805 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
PSMB4-207ENST00000495805 IL13P35225 146 aa18.19■□□□□ 0.5
PSMB4-207ENST00000495805 TNS1Q9HBL0 1735 aaKnown RBP18.19■□□□□ 0.5
PSMB4-207ENST00000495805 ACSBG1Q96GR2 724 aa18.18■□□□□ 0.5
PSMB4-207ENST00000495805 PLSCR1O15162 318 aa18.17■□□□□ 0.5
PSMB4-207ENST00000495805 CAMKK2Q96RR4 588 aa18.17■□□□□ 0.5
PSMB4-207ENST00000495805 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
PSMB4-207ENST00000495805 PPP2R1AP30153 589 aa18.16■□□□□ 0.5
PSMB4-207ENST00000495805 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
PSMB4-207ENST00000495805 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
PSMB4-207ENST00000495805 KCNQ2O43526 872 aa18.15■□□□□ 0.5
PSMB4-207ENST00000495805 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
PSMB4-207ENST00000495805 PLEKHO1Q53GL0 409 aaPredicted RBP18.15■□□□□ 0.5
PSMB4-207ENST00000495805 SYTL4Q96C24 671 aaPredicted RBP18.14■□□□□ 0.49
PSMB4-207ENST00000495805 NHSQ6T4R5 1651 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 CYP27B1O15528 508 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
PSMB4-207ENST00000495805 RALBP1Q15311 655 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 KDRP35968 1356 aa18.13■□□□□ 0.49
PSMB4-207ENST00000495805 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
PSMB4-207ENST00000495805 ZNF316A6NFI3 1004 aaPredicted RBP18.12■□□□□ 0.49
PSMB4-207ENST00000495805 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
PSMB4-207ENST00000495805 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
PSMB4-207ENST00000495805 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
PSMB4-207ENST00000495805 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
PSMB4-207ENST00000495805 HSP90AB1P08238 724 aaKnown RBP18.1■□□□□ 0.49
PSMB4-207ENST00000495805 HMOX1P09601 288 aa18.1■□□□□ 0.49
PSMB4-207ENST00000495805 PHKG2P15735 406 aa18.1■□□□□ 0.49
PSMB4-207ENST00000495805 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
PSMB4-207ENST00000495805 COL3A1P02461 1466 aaPredicted RBP18.09■□□□□ 0.49
PSMB4-207ENST00000495805 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
PSMB4-207ENST00000495805 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
PSMB4-207ENST00000495805 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
PSMB4-207ENST00000495805 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
PSMB4-207ENST00000495805 KAT6BQ8WYB5 2073 aa18.08■□□□□ 0.48
PSMB4-207ENST00000495805 TXNRD1Q16881 649 aa18.07■□□□□ 0.48
PSMB4-207ENST00000495805 DOT1LQ8TEK3 1739 aa18.06■□□□□ 0.48
PSMB4-207ENST00000495805 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
PSMB4-207ENST00000495805 DCAF5Q96JK2 942 aa18.06■□□□□ 0.48
PSMB4-207ENST00000495805 HMGB2P26583 209 aaKnown RBP18.05■□□□□ 0.48
PSMB4-207ENST00000495805 RREB1Q92766 1687 aa18.05■□□□□ 0.48
PSMB4-207ENST00000495805 BTAF1O14981 1849 aa18.05■□□□□ 0.48
PSMB4-207ENST00000495805 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
PSMB4-207ENST00000495805 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.487e-7■■■■□ 21.2
PSMB4-207ENST00000495805 SLC27A3Q5K4L6 730 aa18.04■□□□□ 0.48
PSMB4-207ENST00000495805 PROM2Q8N271 834 aa18.04■□□□□ 0.48
PSMB4-207ENST00000495805 TMOD3Q9NYL9 352 aa18.04■□□□□ 0.48
PSMB4-207ENST00000495805 MYBBP1AQ9BQG0 1328 aaKnown RBP18.03■□□□□ 0.48
PSMB4-207ENST00000495805 ERVV-2B6SEH9 535 aa18.03■□□□□ 0.48
PSMB4-207ENST00000495805 FCHSD2O94868 740 aa18.02■□□□□ 0.48
PSMB4-207ENST00000495805 R3HDM1Q15032 1099 aaKnown RBP18.02■□□□□ 0.48
PSMB4-207ENST00000495805 AKAP4Q5JQC9 854 aa18.02■□□□□ 0.48
PSMB4-207ENST00000495805 SMARCC1Q92922 1105 aaPredicted RBP18.02■□□□□ 0.48
PSMB4-207ENST00000495805 NUP188Q5SRE5 1749 aa18.01■□□□□ 0.47
PSMB4-207ENST00000495805 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
PSMB4-207ENST00000495805 NEFMP07197 916 aa18■□□□□ 0.47
PSMB4-207ENST00000495805 CABP4P57796 275 aa18■□□□□ 0.47
PSMB4-207ENST00000495805 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
PSMB4-207ENST00000495805 PIGBQ92521 554 aa18■□□□□ 0.47
PSMB4-207ENST00000495805 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
PSMB4-207ENST00000495805 MTHFSDQ2M296 383 aaKnown RBP17.99■□□□□ 0.47
PSMB4-207ENST00000495805 RSPH6AQ9H0K4 717 aa17.99■□□□□ 0.47
PSMB4-207ENST00000495805 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
PSMB4-207ENST00000495805 PRKRIP1Q9H875 184 aaPredicted RBP17.99■□□□□ 0.47
PSMB4-207ENST00000495805 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
PSMB4-207ENST00000495805 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
PSMB4-207ENST00000495805 CCNL1Q9UK58 526 aaPredicted RBP17.98■□□□□ 0.47
PSMB4-207ENST00000495805 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
PSMB4-207ENST00000495805 PALLDQ8WX93 1383 aa17.97■□□□□ 0.47
PSMB4-207ENST00000495805 ITGB4P16144 1822 aa17.96■□□□□ 0.47
PSMB4-207ENST00000495805 LRRC4BQ9NT99 713 aa17.96■□□□□ 0.47
PSMB4-207ENST00000495805 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
PSMB4-207ENST00000495805 SLC15A2Q16348 729 aa17.95■□□□□ 0.46
PSMB4-207ENST00000495805 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
PSMB4-207ENST00000495805 NFATC2IPQ8NCF5 419 aa17.94■□□□□ 0.46
PSMB4-207ENST00000495805 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
PSMB4-207ENST00000495805 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
PSMB4-207ENST00000495805 LY75O60449 1722 aa17.93■□□□□ 0.46
PSMB4-207ENST00000495805 RNMTO43148 476 aaKnown RBP17.93■□□□□ 0.46
PSMB4-207ENST00000495805 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
PSMB4-207ENST00000495805 ASAP1Q9ULH1 1129 aa17.93■□□□□ 0.46
PSMB4-207ENST00000495805 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
PSMB4-207ENST00000495805 LGR6Q9HBX8 967 aa17.92■□□□□ 0.46
PSMB4-207ENST00000495805 ATG3Q9NT62 314 aa17.92■□□□□ 0.46
PSMB4-207ENST00000495805 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
PSMB4-207ENST00000495805 ANP32CO43423 234 aa17.91■□□□□ 0.46
PSMB4-207ENST00000495805 KCNQ4P56696 695 aa17.91■□□□□ 0.46
PSMB4-207ENST00000495805 SIK1P57059 783 aa17.91■□□□□ 0.46
PSMB4-207ENST00000495805 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms