RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 INTS3Q68E01 1043 aaKnown RBP19.24■□□□□ 0.67
CALD1-222ENST00000495522 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
CALD1-222ENST00000495522 KRT24Q2M2I5 525 aa19.23■□□□□ 0.67
CALD1-222ENST00000495522 BMP2KLQ5H9B9 411 aa19.23■□□□□ 0.67
CALD1-222ENST00000495522 UBE2Q2Q8WVN8 375 aa19.23■□□□□ 0.67
CALD1-222ENST00000495522 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
CALD1-222ENST00000495522 IGSF1Q8N6C5 1336 aa19.22■□□□□ 0.67
CALD1-222ENST00000495522 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
CALD1-222ENST00000495522 KCNA6P17658 529 aa19.22■□□□□ 0.67
CALD1-222ENST00000495522 SETD1BQ9UPS6 1966 aaKnown RBP19.22■□□□□ 0.67
CALD1-222ENST00000495522 CEP170BQ9Y4F5 1589 aaPredicted RBP19.22■□□□□ 0.67
CALD1-222ENST00000495522 MTHFSDQ2M296 383 aaKnown RBP19.22■□□□□ 0.67
CALD1-222ENST00000495522 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
CALD1-222ENST00000495522 PTPRCP08575 1304 aa19.21■□□□□ 0.67
CALD1-222ENST00000495522 RGS12O14924 1447 aa19.21■□□□□ 0.67
CALD1-222ENST00000495522 NLRP6P59044 892 aa19.21■□□□□ 0.67
CALD1-222ENST00000495522 EYA1Q99502 592 aa19.2■□□□□ 0.66
CALD1-222ENST00000495522 GAS2L2Q8NHY3 880 aa19.2■□□□□ 0.66
CALD1-222ENST00000495522 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
CALD1-222ENST00000495522 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
CALD1-222ENST00000495522 FOXO3O43524 673 aa19.19■□□□□ 0.66
CALD1-222ENST00000495522 GSE1Q14687 1217 aa19.19■□□□□ 0.66
CALD1-222ENST00000495522 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
CALD1-222ENST00000495522 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
CALD1-222ENST00000495522 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
CALD1-222ENST00000495522 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
CALD1-222ENST00000495522 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
CALD1-222ENST00000495522 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
CALD1-222ENST00000495522 HOXC9P31274 260 aa19.16■□□□□ 0.66
CALD1-222ENST00000495522 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
CALD1-222ENST00000495522 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
CALD1-222ENST00000495522 MIS18AQ9NYP9 233 aa19.15■□□□□ 0.66
CALD1-222ENST00000495522 ATP10DQ9P241 1426 aa19.15■□□□□ 0.66
CALD1-222ENST00000495522 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
CALD1-222ENST00000495522 RPAP2Q8IXW5 612 aaPredicted RBP19.15■□□□□ 0.66
CALD1-222ENST00000495522 MSH6P52701 1360 aa19.14■□□□□ 0.66
CALD1-222ENST00000495522 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
CALD1-222ENST00000495522 LRRC37A3O60309 1634 aa19.14■□□□□ 0.65
CALD1-222ENST00000495522 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
CALD1-222ENST00000495522 NWD1Q149M9 1564 aa19.12■□□□□ 0.65
CALD1-222ENST00000495522 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
CALD1-222ENST00000495522 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
CALD1-222ENST00000495522 CEP85Q6P2H3 762 aa19.12■□□□□ 0.65
CALD1-222ENST00000495522 HSCBQ8IWL3 235 aa19.12■□□□□ 0.65
CALD1-222ENST00000495522 KDM4FA0A1W2PPD8 638 aa19.11■□□□□ 0.65
CALD1-222ENST00000495522 GNAT3A8MTJ3 354 aa19.11■□□□□ 0.65
CALD1-222ENST00000495522 ANKLE2Q86XL3 938 aa19.11■□□□□ 0.65
CALD1-222ENST00000495522 PHF8Q9UPP1 1060 aa19.11■□□□□ 0.65
CALD1-222ENST00000495522 TBC1D9Q6ZT07 1266 aa19.1■□□□□ 0.65
CALD1-222ENST00000495522 PLEKHM2Q8IWE5 1019 aa19.09■□□□□ 0.65
CALD1-222ENST00000495522 MEIS3Q99687 375 aa19.09■□□□□ 0.65
CALD1-222ENST00000495522 CDC45O75419 566 aa19.09■□□□□ 0.65
CALD1-222ENST00000495522 CCT4P50991 539 aaKnown RBP19.09■□□□□ 0.65
CALD1-222ENST00000495522 MAP3K5Q99683 1374 aa19.08■□□□□ 0.65
CALD1-222ENST00000495522 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.65
CALD1-222ENST00000495522 SNX21Q969T3 373 aa19.08■□□□□ 0.65
CALD1-222ENST00000495522 STK31Q9BXU1 1019 aa19.08■□□□□ 0.65
CALD1-222ENST00000495522 G2E3Q7L622 706 aa19.08■□□□□ 0.64
CALD1-222ENST00000495522 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
CALD1-222ENST00000495522 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
CALD1-222ENST00000495522 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
CALD1-222ENST00000495522 SOS1Q07889 1333 aaPredicted RBP19.07■□□□□ 0.64
CALD1-222ENST00000495522 GSPT1P15170 499 aaKnown RBP19.06■□□□□ 0.64
CALD1-222ENST00000495522 LTV1Q96GA3 475 aaPredicted RBP19.06■□□□□ 0.64
CALD1-222ENST00000495522 CHMP5Q9NZZ3 219 aa19.06■□□□□ 0.64
CALD1-222ENST00000495522 LTN1O94822 1766 aa19.06■□□□□ 0.64
CALD1-222ENST00000495522 TTC22Q5TAA0 569 aa19.06■□□□□ 0.64
CALD1-222ENST00000495522 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
CALD1-222ENST00000495522 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
CALD1-222ENST00000495522 HMMRO75330 724 aa19.05■□□□□ 0.64
CALD1-222ENST00000495522 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
CALD1-222ENST00000495522 F6X3S4 739 aa19.04■□□□□ 0.64
CALD1-222ENST00000495522 IL17REQ8NFR9 667 aa19.04■□□□□ 0.64
CALD1-222ENST00000495522 ADGRL3Q9HAR2 1447 aa19.04■□□□□ 0.64
CALD1-222ENST00000495522 NCOA3Q9Y6Q9 1424 aa19.04■□□□□ 0.64
CALD1-222ENST00000495522 NFAT5O94916 1531 aa19.04■□□□□ 0.64
CALD1-222ENST00000495522 TAF7Q15545 349 aaPredicted RBP19.03■□□□□ 0.64
CALD1-222ENST00000495522 IP6K1Q92551 441 aa19.03■□□□□ 0.64
CALD1-222ENST00000495522 C16orf71Q8IYS4 520 aaPredicted RBP19.03■□□□□ 0.64
CALD1-222ENST00000495522 KIF2CQ99661 725 aa19.03■□□□□ 0.64
CALD1-222ENST00000495522 FLIIQ13045 1269 aa19.02■□□□□ 0.64
CALD1-222ENST00000495522 CACNA1FO60840 1977 aa19.01■□□□□ 0.63
CALD1-222ENST00000495522 GNAI2P04899 355 aa19■□□□□ 0.63
CALD1-222ENST00000495522 PSME1Q06323 249 aa19■□□□□ 0.63
CALD1-222ENST00000495522 USHBP1Q8N6Y0 703 aa19■□□□□ 0.63
CALD1-222ENST00000495522 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
CALD1-222ENST00000495522 ESCO1Q5FWF5 840 aa19■□□□□ 0.63
CALD1-222ENST00000495522 KCNH5Q8NCM2 988 aa19■□□□□ 0.63
CALD1-222ENST00000495522 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
CALD1-222ENST00000495522 OTUD7AQ8TE49 926 aaPredicted RBP18.99■□□□□ 0.63
CALD1-222ENST00000495522 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
CALD1-222ENST00000495522 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
CALD1-222ENST00000495522 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
CALD1-222ENST00000495522 APBB1O00213 710 aa18.98■□□□□ 0.63
CALD1-222ENST00000495522 GNAI3P08754 354 aa18.98■□□□□ 0.63
CALD1-222ENST00000495522 MCM4P33991 863 aa18.98■□□□□ 0.63
CALD1-222ENST00000495522 DDIT3P35638 169 aa18.98■□□□□ 0.63
CALD1-222ENST00000495522 N4BP2Q86UW6 1770 aaPredicted RBP18.97■□□□□ 0.63
CALD1-222ENST00000495522 PXDNLA1KZ92 1463 aa18.97■□□□□ 0.63
CALD1-222ENST00000495522 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms