RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 PROM2Q8N271 834 aa19.52■□□□□ 0.72
SCAP-213ENST00000494938 WNK3Q9BYP7 1800 aa19.52■□□□□ 0.72
SCAP-213ENST00000494938 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
SCAP-213ENST00000494938 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
SCAP-213ENST00000494938 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
SCAP-213ENST00000494938 CYP27B1O15528 508 aa19.5■□□□□ 0.71
SCAP-213ENST00000494938 MAP2P11137 1827 aaKnown RBP19.5■□□□□ 0.71
SCAP-213ENST00000494938 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
SCAP-213ENST00000494938 PARD3Q8TEW0 1356 aa19.49■□□□□ 0.71
SCAP-213ENST00000494938 RGPD1P0DJD0 1748 aa19.49■□□□□ 0.71
SCAP-213ENST00000494938 PRIM1P49642 420 aaKnown RBP19.49■□□□□ 0.71
SCAP-213ENST00000494938 TNS1Q9HBL0 1735 aaKnown RBP19.48■□□□□ 0.71
SCAP-213ENST00000494938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.71
SCAP-213ENST00000494938 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
SCAP-213ENST00000494938 AEBP1Q8IUX7 1158 aa19.47■□□□□ 0.71
SCAP-213ENST00000494938 SPG7Q9UQ90 795 aa19.47■□□□□ 0.71
SCAP-213ENST00000494938 NKX1-1Q15270 411 aaPredicted RBP19.46■□□□□ 0.71
SCAP-213ENST00000494938 PCDH11XQ9BZA7 1347 aa19.46■□□□□ 0.71
SCAP-213ENST00000494938 PCDH11YQ9BZA8 1340 aa19.46■□□□□ 0.71
SCAP-213ENST00000494938 SULT6B1Q6IMI4 303 aa19.45■□□□□ 0.7
SCAP-213ENST00000494938 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
SCAP-213ENST00000494938 PSDA5PKW4 1024 aaPredicted RBP19.43■□□□□ 0.7
SCAP-213ENST00000494938 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
SCAP-213ENST00000494938 PPP2R1AP30153 589 aa19.43■□□□□ 0.7
SCAP-213ENST00000494938 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
SCAP-213ENST00000494938 R3HDM1Q15032 1099 aaKnown RBP19.42■□□□□ 0.7
SCAP-213ENST00000494938 SYTL4Q96C24 671 aaPredicted RBP19.42■□□□□ 0.7
SCAP-213ENST00000494938 PHKG2P15735 406 aa19.41■□□□□ 0.7
SCAP-213ENST00000494938 PLEKHO1Q53GL0 409 aaPredicted RBP19.41■□□□□ 0.7
SCAP-213ENST00000494938 SBF2Q86WG5 1849 aa19.41■□□□□ 0.7
SCAP-213ENST00000494938 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
SCAP-213ENST00000494938 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
SCAP-213ENST00000494938 KDRP35968 1356 aa19.4■□□□□ 0.7
SCAP-213ENST00000494938 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.69
SCAP-213ENST00000494938 PLEKHG2Q9H7P9 1386 aa19.39■□□□□ 0.69
SCAP-213ENST00000494938 HMOX1P09601 288 aa19.38■□□□□ 0.69
SCAP-213ENST00000494938 LRRC4BQ9NT99 713 aa19.38■□□□□ 0.69
SCAP-213ENST00000494938 SHANK3Q9BYB0 1731 aa19.37■□□□□ 0.69
SCAP-213ENST00000494938 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
SCAP-213ENST00000494938 COL3A1P02461 1466 aaPredicted RBP19.36■□□□□ 0.69
SCAP-213ENST00000494938 MPRIPQ6WCQ1 1025 aa19.36■□□□□ 0.69
SCAP-213ENST00000494938 PIGBQ92521 554 aa19.36■□□□□ 0.69
SCAP-213ENST00000494938 NHSQ6T4R5 1651 aa19.36■□□□□ 0.69
SCAP-213ENST00000494938 ZNF530Q6P9A1 599 aaPredicted RBP19.35■□□□□ 0.69
SCAP-213ENST00000494938 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
SCAP-213ENST00000494938 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.68
SCAP-213ENST00000494938 KCNQ4P56696 695 aa19.33■□□□□ 0.68
SCAP-213ENST00000494938 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
SCAP-213ENST00000494938 DCAF5Q96JK2 942 aa19.32■□□□□ 0.68
SCAP-213ENST00000494938 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
SCAP-213ENST00000494938 RREB1Q92766 1687 aa19.31■□□□□ 0.68
SCAP-213ENST00000494938 ERVV-2B6SEH9 535 aa19.31■□□□□ 0.68
SCAP-213ENST00000494938 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
SCAP-213ENST00000494938 SLC15A2Q16348 729 aa19.31■□□□□ 0.68
SCAP-213ENST00000494938 RALBP1Q15311 655 aa19.3■□□□□ 0.68
SCAP-213ENST00000494938 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
SCAP-213ENST00000494938 STK32BQ9NY57 414 aa19.3■□□□□ 0.68
SCAP-213ENST00000494938 AKAP4Q5JQC9 854 aa19.29■□□□□ 0.68
SCAP-213ENST00000494938 C1orf141Q5JVX7 400 aa19.29■□□□□ 0.68
SCAP-213ENST00000494938 PDGFDQ9GZP0 370 aaPredicted RBP19.29■□□□□ 0.68
SCAP-213ENST00000494938 TMOD3Q9NYL9 352 aa19.29■□□□□ 0.68
SCAP-213ENST00000494938 ASAP1Q9ULH1 1129 aa19.29■□□□□ 0.68
SCAP-213ENST00000494938 RGPD3A6NKT7 1758 aaPredicted RBP19.29■□□□□ 0.68
SCAP-213ENST00000494938 RGPD4Q7Z3J3 1758 aa19.29■□□□□ 0.68
SCAP-213ENST00000494938 NUP188Q5SRE5 1749 aa19.28■□□□□ 0.68
SCAP-213ENST00000494938 ZNF827Q17R98 1081 aa19.28■□□□□ 0.68
SCAP-213ENST00000494938 SMARCC1Q92922 1105 aaPredicted RBP19.28■□□□□ 0.68
SCAP-213ENST00000494938 AKT1S1Q96B36 256 aa19.28■□□□□ 0.68
SCAP-213ENST00000494938 ATG3Q9NT62 314 aa19.28■□□□□ 0.68
SCAP-213ENST00000494938 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
SCAP-213ENST00000494938 NUDCQ9Y266 331 aa19.28■□□□□ 0.68
SCAP-213ENST00000494938 BTAF1O14981 1849 aa19.28■□□□□ 0.68
SCAP-213ENST00000494938 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.68
SCAP-213ENST00000494938 RSPH6AQ9H0K4 717 aa19.27■□□□□ 0.68
SCAP-213ENST00000494938 LGR6Q9HBX8 967 aa19.27■□□□□ 0.68
SCAP-213ENST00000494938 KDM6AO15550 1401 aaPredicted RBP19.26■□□□□ 0.67
SCAP-213ENST00000494938 U2AF1L5P0DN76 240 aaPredicted RBP19.26■□□□□ 0.67
SCAP-213ENST00000494938 U2AF1Q01081 240 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCAP-213ENST00000494938 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
SCAP-213ENST00000494938 DOT1LQ8TEK3 1739 aa19.25■□□□□ 0.67
SCAP-213ENST00000494938 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
SCAP-213ENST00000494938 CABP4P57796 275 aa19.25■□□□□ 0.67
SCAP-213ENST00000494938 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
SCAP-213ENST00000494938 FCHSD2O94868 740 aa19.24■□□□□ 0.67
SCAP-213ENST00000494938 PRKAR2BP31323 418 aa19.24■□□□□ 0.67
SCAP-213ENST00000494938 TOGARAM1Q9Y4F4 1720 aa19.23■□□□□ 0.67
SCAP-213ENST00000494938 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
SCAP-213ENST00000494938 KAT6BQ8WYB5 2073 aa19.23■□□□□ 0.67
SCAP-213ENST00000494938 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
SCAP-213ENST00000494938 SIK1P57059 783 aa19.22■□□□□ 0.67
SCAP-213ENST00000494938 SLC4A9Q96Q91 983 aa19.21■□□□□ 0.67
SCAP-213ENST00000494938 IL17REQ8NFR9 667 aa19.2■□□□□ 0.66
SCAP-213ENST00000494938 GAS2L2Q8NHY3 880 aa19.2■□□□□ 0.66
SCAP-213ENST00000494938 SLC52A2Q9HAB3 445 aa19.2■□□□□ 0.66
SCAP-213ENST00000494938 PAPPAQ13219 1627 aa19.19■□□□□ 0.66
SCAP-213ENST00000494938 ITPK1Q13572 414 aa19.19■□□□□ 0.66
SCAP-213ENST00000494938 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
SCAP-213ENST00000494938 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
SCAP-213ENST00000494938 MYBBP1AQ9BQG0 1328 aaKnown RBP19.19■□□□□ 0.66
SCAP-213ENST00000494938 ZBTB7AO95365 584 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms