RNA–Protein interactions for RNA: ENST00000494917.6

CCDC180-206, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 2,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-206ENST00000494917 ATF3P18847 181 aa14□□□□□ -0.17
CCDC180-206ENST00000494917 USP54Q70EL1 1684 aa14□□□□□ -0.17
CCDC180-206ENST00000494917 GCP02774 474 aa14□□□□□ -0.17
CCDC180-206ENST00000494917 MVPQ14764 893 aaKnown RBP14□□□□□ -0.17
CCDC180-206ENST00000494917 TWISTNBQ3B726 338 aaPredicted RBP14□□□□□ -0.17
CCDC180-206ENST00000494917 IP6K1Q92551 441 aa13.99□□□□□ -0.17
CCDC180-206ENST00000494917 NFAT5O94916 1531 aa13.99□□□□□ -0.17
CCDC180-206ENST00000494917 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
CCDC180-206ENST00000494917 TMEM57Q8N5G2 664 aa13.99□□□□□ -0.17
CCDC180-206ENST00000494917 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
CCDC180-206ENST00000494917 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
CCDC180-206ENST00000494917 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
CCDC180-206ENST00000494917 ITPRIPQ8IWB1 547 aa13.98□□□□□ -0.17
CCDC180-206ENST00000494917 RGS3P49796 1198 aa13.98□□□□□ -0.17
CCDC180-206ENST00000494917 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
CCDC180-206ENST00000494917 CHL1O00533 1208 aa13.97□□□□□ -0.17
CCDC180-206ENST00000494917 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
CCDC180-206ENST00000494917 MST1RQ04912 1400 aa13.97□□□□□ -0.17
CCDC180-206ENST00000494917 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
CCDC180-206ENST00000494917 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
CCDC180-206ENST00000494917 FAM161AQ3B820 660 aa13.96□□□□□ -0.17
CCDC180-206ENST00000494917 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
CCDC180-206ENST00000494917 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.96□□□□□ -0.17
CCDC180-206ENST00000494917 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
CCDC180-206ENST00000494917 KIF16BQ96L93 1317 aa13.96□□□□□ -0.18
CCDC180-206ENST00000494917 CRB1P82279 1406 aa13.96□□□□□ -0.18
CCDC180-206ENST00000494917 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
CCDC180-206ENST00000494917 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
CCDC180-206ENST00000494917 ZC3H6P61129 1189 aaKnown RBP13.95□□□□□ -0.18
CCDC180-206ENST00000494917 SLC4A3P48751 1232 aa13.94□□□□□ -0.18
CCDC180-206ENST00000494917 GAS2L2Q8NHY3 880 aa13.94□□□□□ -0.18
CCDC180-206ENST00000494917 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
CCDC180-206ENST00000494917 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
CCDC180-206ENST00000494917 RGPD2P0DJD1 1756 aa13.94□□□□□ -0.18
CCDC180-206ENST00000494917 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
CCDC180-206ENST00000494917 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
CCDC180-206ENST00000494917 ZNF335Q9H4Z2 1342 aaPredicted RBP13.93□□□□□ -0.18
CCDC180-206ENST00000494917 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
CCDC180-206ENST00000494917 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
CCDC180-206ENST00000494917 STRCQ7RTU9 1775 aa13.93□□□□□ -0.18
CCDC180-206ENST00000494917 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
CCDC180-206ENST00000494917 MSH6P52701 1360 aa13.92□□□□□ -0.18
CCDC180-206ENST00000494917 USP19O94966 1318 aa13.92□□□□□ -0.18
CCDC180-206ENST00000494917 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
CCDC180-206ENST00000494917 BRPF1P55201 1214 aaPredicted RBP13.92□□□□□ -0.18
CCDC180-206ENST00000494917 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
CCDC180-206ENST00000494917 DDX19BQ9UMR2 479 aa13.92□□□□□ -0.18
CCDC180-206ENST00000494917 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
CCDC180-206ENST00000494917 SLIT3O75094 1523 aa13.91□□□□□ -0.18
CCDC180-206ENST00000494917 C8orf34Q49A92 452 aa13.9□□□□□ -0.18
CCDC180-206ENST00000494917 ZBTB40Q9NUA8 1239 aa13.9□□□□□ -0.18
CCDC180-206ENST00000494917 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
CCDC180-206ENST00000494917 KIF1AQ12756 1690 aa13.9□□□□□ -0.18
CCDC180-206ENST00000494917 MED1Q15648 1581 aaPredicted RBP13.89□□□□□ -0.19
CCDC180-206ENST00000494917 AAMPQ13685 434 aa13.89□□□□□ -0.19
CCDC180-206ENST00000494917 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
CCDC180-206ENST00000494917 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
CCDC180-206ENST00000494917 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
CCDC180-206ENST00000494917 DCCP43146 1447 aa13.89□□□□□ -0.19
CCDC180-206ENST00000494917 RGPD5Q99666 1765 aa13.88□□□□□ -0.19
CCDC180-206ENST00000494917 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
CCDC180-206ENST00000494917 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
CCDC180-206ENST00000494917 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
CCDC180-206ENST00000494917 BRINP3Q76B58 766 aa13.88□□□□□ -0.19
CCDC180-206ENST00000494917 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
CCDC180-206ENST00000494917 KIAA0232Q92628 1395 aa13.87□□□□□ -0.19
CCDC180-206ENST00000494917 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
CCDC180-206ENST00000494917 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
CCDC180-206ENST00000494917 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
CCDC180-206ENST00000494917 NCOA3Q9Y6Q9 1424 aa13.87□□□□□ -0.19
CCDC180-206ENST00000494917 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
CCDC180-206ENST00000494917 HTATSF1O43719 755 aaKnown RBP13.87□□□□□ -0.19
CCDC180-206ENST00000494917 ABCC4O15439 1325 aa13.86□□□□□ -0.19
CCDC180-206ENST00000494917 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
CCDC180-206ENST00000494917 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
CCDC180-206ENST00000494917 G2E3Q7L622 706 aa13.86□□□□□ -0.19
CCDC180-206ENST00000494917 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
CCDC180-206ENST00000494917 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
CCDC180-206ENST00000494917 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
CCDC180-206ENST00000494917 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
CCDC180-206ENST00000494917 ERBB3P21860 1342 aa13.84□□□□□ -0.19
CCDC180-206ENST00000494917 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
CCDC180-206ENST00000494917 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
CCDC180-206ENST00000494917 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
CCDC180-206ENST00000494917 PXDNQ92626 1479 aa13.84□□□□□ -0.19
CCDC180-206ENST00000494917 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
CCDC180-206ENST00000494917 RGS12O14924 1447 aa13.83□□□□□ -0.19
CCDC180-206ENST00000494917 KCNQ3O43525 872 aa13.83□□□□□ -0.2
CCDC180-206ENST00000494917 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
CCDC180-206ENST00000494917 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
CCDC180-206ENST00000494917 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
CCDC180-206ENST00000494917 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
CCDC180-206ENST00000494917 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
CCDC180-206ENST00000494917 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
CCDC180-206ENST00000494917 F6X3S4 739 aa13.82□□□□□ -0.2
CCDC180-206ENST00000494917 CEMIPQ8WUJ3 1361 aa13.82□□□□□ -0.2
CCDC180-206ENST00000494917 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
CCDC180-206ENST00000494917 UBE2Q2Q8WVN8 375 aa13.81□□□□□ -0.2
CCDC180-206ENST00000494917 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
CCDC180-206ENST00000494917 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms