RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 COG6Q9Y2V7 657 aa10.86□□□□□ -0.67
RAF1-212ENST00000494557 PTPRCP08575 1304 aa10.86□□□□□ -0.67
RAF1-212ENST00000494557 EIF4A2Q14240 407 aaKnown RBP10.86□□□□□ -0.67
RAF1-212ENST00000494557 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
RAF1-212ENST00000494557 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
RAF1-212ENST00000494557 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 COL22A1Q8NFW1 1626 aaPredicted RBP10.85□□□□□ -0.67
RAF1-212ENST00000494557 IPO8O15397 1037 aaKnown RBP10.85□□□□□ -0.67
RAF1-212ENST00000494557 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 STK26Q9P289 416 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 EMILIN1Q9Y6C2 1016 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 TJP1Q07157 1748 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
RAF1-212ENST00000494557 COG3Q96JB2 828 aa10.84□□□□□ -0.67
RAF1-212ENST00000494557 RRP7AQ9Y3A4 280 aaKnown RBP10.84□□□□□ -0.67
RAF1-212ENST00000494557 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
RAF1-212ENST00000494557 BMP2KLQ5H9B9 411 aa10.84□□□□□ -0.67
RAF1-212ENST00000494557 TSR2Q969E8 191 aaKnown RBP10.84□□□□□ -0.67
RAF1-212ENST00000494557 NOB1Q9ULX3 412 aaKnown RBP10.84□□□□□ -0.67
RAF1-212ENST00000494557 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
RAF1-212ENST00000494557 SNX21Q969T3 373 aa10.83□□□□□ -0.68
RAF1-212ENST00000494557 SIRT2Q8IXJ6 389 aa10.83□□□□□ -0.68
RAF1-212ENST00000494557 TMEM57Q8N5G2 664 aa10.83□□□□□ -0.68
RAF1-212ENST00000494557 RREB1Q92766 1687 aa10.83□□□□□ -0.68
RAF1-212ENST00000494557 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
RAF1-212ENST00000494557 TXNDC2Q86VQ3 553 aa10.82□□□□□ -0.68
RAF1-212ENST00000494557 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
RAF1-212ENST00000494557 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
RAF1-212ENST00000494557 SKAP1Q86WV1 359 aa10.82□□□□□ -0.68
RAF1-212ENST00000494557 SENP3-EIF4A1A0A087X0R7 540 aa10.81□□□□□ -0.68
RAF1-212ENST00000494557 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
RAF1-212ENST00000494557 THEMISQ8N1K5 641 aaPredicted RBP10.81□□□□□ -0.68
RAF1-212ENST00000494557 ZNF831Q5JPB2 1677 aa10.81□□□□□ -0.68
RAF1-212ENST00000494557 SEC24BO95487 1268 aa10.81□□□□□ -0.68
RAF1-212ENST00000494557 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
RAF1-212ENST00000494557 PXDNQ92626 1479 aa10.81□□□□□ -0.68
RAF1-212ENST00000494557 OSBPL3Q9H4L5 887 aa10.8□□□□□ -0.68
RAF1-212ENST00000494557 NPHP4O75161 1426 aaPredicted RBP10.8□□□□□ -0.68
RAF1-212ENST00000494557 LRP6O75581 1613 aa10.8□□□□□ -0.68
RAF1-212ENST00000494557 SMC4Q9NTJ3 1288 aa10.8□□□□□ -0.68
RAF1-212ENST00000494557 MAP3K19Q56UN5 1328 aa10.8□□□□□ -0.68
RAF1-212ENST00000494557 TMEM94Q12767 1356 aa10.8□□□□□ -0.68
RAF1-212ENST00000494557 DEKP35659 375 aaKnown RBP10.79□□□□□ -0.68
RAF1-212ENST00000494557 AFDNP55196 1824 aaKnown RBP10.79□□□□□ -0.68
RAF1-212ENST00000494557 KIF2CQ99661 725 aa10.79□□□□□ -0.68
RAF1-212ENST00000494557 ZRANB1Q9UGI0 708 aa10.79□□□□□ -0.68
RAF1-212ENST00000494557 API5Q9BZZ5 524 aaKnown RBP10.79□□□□□ -0.68
RAF1-212ENST00000494557 DCTPP1Q9H773 170 aa10.79□□□□□ -0.68
RAF1-212ENST00000494557 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
RAF1-212ENST00000494557 COL15A1P39059 1388 aa10.78□□□□□ -0.68
RAF1-212ENST00000494557 EPB41L2O43491 1005 aaKnown RBP10.78□□□□□ -0.68
RAF1-212ENST00000494557 HOXB7P09629 217 aa10.78□□□□□ -0.68
RAF1-212ENST00000494557 AMOTL2Q9Y2J4 779 aa10.78□□□□□ -0.68
RAF1-212ENST00000494557 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
RAF1-212ENST00000494557 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
RAF1-212ENST00000494557 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
RAF1-212ENST00000494557 ANKRD36CQ5JPF3 1778 aa10.77□□□□□ -0.68
RAF1-212ENST00000494557 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.68
RAF1-212ENST00000494557 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
RAF1-212ENST00000494557 C8orf58Q8NAV2 365 aa10.77□□□□□ -0.69
RAF1-212ENST00000494557 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
RAF1-212ENST00000494557 SAFB2Q14151 953 aaKnown RBP eCLIP10.77□□□□□ -0.69
RAF1-212ENST00000494557 CHD1LQ86WJ1 897 aa10.76□□□□□ -0.69
RAF1-212ENST00000494557 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
RAF1-212ENST00000494557 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
RAF1-212ENST00000494557 EID1Q9Y6B2 187 aa10.76□□□□□ -0.69
RAF1-212ENST00000494557 TWISTNBQ3B726 338 aaPredicted RBP10.76□□□□□ -0.69
RAF1-212ENST00000494557 ARAP2Q8WZ64 1704 aa10.76□□□□□ -0.69
RAF1-212ENST00000494557 AOX1Q06278 1338 aa10.75□□□□□ -0.69
RAF1-212ENST00000494557 LAMB2P55268 1798 aa10.75□□□□□ -0.69
RAF1-212ENST00000494557 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
RAF1-212ENST00000494557 HOXC9P31274 260 aa10.74□□□□□ -0.69
RAF1-212ENST00000494557 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
RAF1-212ENST00000494557 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
RAF1-212ENST00000494557 USP42Q9H9J4 1324 aaKnown RBP10.74□□□□□ -0.69
RAF1-212ENST00000494557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.69
RAF1-212ENST00000494557 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
RAF1-212ENST00000494557 CASZ1Q86V15 1759 aa10.73□□□□□ -0.69
RAF1-212ENST00000494557 RRS1Q15050 365 aaKnown RBP10.72□□□□□ -0.69
RAF1-212ENST00000494557 NFKBIBQ15653 356 aa10.72□□□□□ -0.69
RAF1-212ENST00000494557 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
RAF1-212ENST00000494557 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
RAF1-212ENST00000494557 AEBP1Q8IUX7 1158 aa10.72□□□□□ -0.69
RAF1-212ENST00000494557 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
RAF1-212ENST00000494557 CEP85Q6P2H3 762 aa10.71□□□□□ -0.69
RAF1-212ENST00000494557 FRAT1Q92837 279 aaPredicted RBP10.71□□□□□ -0.69
RAF1-212ENST00000494557 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
RAF1-212ENST00000494557 CPDO75976 1380 aa10.71□□□□□ -0.69
RAF1-212ENST00000494557 EYA1Q99502 592 aa10.71□□□□□ -0.69
RAF1-212ENST00000494557 A0A1B0GUL6 1792 aa10.71□□□□□ -0.7
RAF1-212ENST00000494557 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.7
RAF1-212ENST00000494557 HSP90AB2PQ58FF8 381 aa10.71□□□□□ -0.7
RAF1-212ENST00000494557 IP6K1Q92551 441 aa10.71□□□□□ -0.7
RAF1-212ENST00000494557 FBLN1P23142 703 aa10.7□□□□□ -0.7
RAF1-212ENST00000494557 UTYO14607 1347 aa10.7□□□□□ -0.7
RAF1-212ENST00000494557 NEUROD2Q15784 382 aa10.7□□□□□ -0.7
RAF1-212ENST00000494557 KCNA6P17658 529 aa10.69□□□□□ -0.7
RAF1-212ENST00000494557 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms