RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 MYD88Q99836 296 aa13.95□□□□□ -0.18
COL25A1-204ENST00000494183 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
COL25A1-204ENST00000494183 KIF1BPQ96EK5 621 aa13.95□□□□□ -0.18
COL25A1-204ENST00000494183 PRPF40AO75400 957 aaKnown RBP13.94□□□□□ -0.18
COL25A1-204ENST00000494183 EXOC5O00471 708 aa13.94□□□□□ -0.18
COL25A1-204ENST00000494183 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
COL25A1-204ENST00000494183 BLOC1S2Q6QNY1 142 aa13.94□□□□□ -0.18
COL25A1-204ENST00000494183 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
COL25A1-204ENST00000494183 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-204ENST00000494183 SMARCA5O60264 1052 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-204ENST00000494183 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
COL25A1-204ENST00000494183 TRAK2O60296 914 aa13.93□□□□□ -0.18
COL25A1-204ENST00000494183 CAVIN1Q6NZI2 390 aaKnown RBP13.93□□□□□ -0.18
COL25A1-204ENST00000494183 SKAP1Q86WV1 359 aa13.93□□□□□ -0.18
COL25A1-204ENST00000494183 RAI14Q9P0K7 980 aa13.93□□□□□ -0.18
COL25A1-204ENST00000494183 DNAAF4Q8WXU2 420 aa13.93□□□□□ -0.18
COL25A1-204ENST00000494183 TRIM27P14373 513 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 TTC21BQ7Z4L5 1316 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 A2MP01023 1474 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 A0A0U1RQG5 324 aaPredicted RBP13.92□□□□□ -0.18
COL25A1-204ENST00000494183 FLIIQ13045 1269 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
COL25A1-204ENST00000494183 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
COL25A1-204ENST00000494183 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL25A1-204ENST00000494183 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 JAKMIP1Q96N16 626 aaKnown RBP13.91□□□□□ -0.18
COL25A1-204ENST00000494183 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 A0A087WZG4 1122 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 TDO2P48775 406 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 STK38Q15208 465 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 ANKRD1Q15327 319 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 ZBTB3Q9H5J0 574 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
COL25A1-204ENST00000494183 MX1P20591 662 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 LRRFIP2Q9Y608 721 aaKnown RBP13.91□□□□□ -0.18
COL25A1-204ENST00000494183 MBD3O95983 291 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
COL25A1-204ENST00000494183 K7ELQ4 463 aaPredicted RBP13.9□□□□□ -0.18
COL25A1-204ENST00000494183 ZPR1O75312 459 aa13.9□□□□□ -0.18
COL25A1-204ENST00000494183 ANXA1P04083 346 aa13.9□□□□□ -0.18
COL25A1-204ENST00000494183 TRIM22Q8IYM9 498 aa13.9□□□□□ -0.18
COL25A1-204ENST00000494183 UHRF1BP1LA0JNW5 1464 aa13.9□□□□□ -0.18
COL25A1-204ENST00000494183 LARP1BQ659C4 914 aaKnown RBP13.9□□□□□ -0.18
COL25A1-204ENST00000494183 TRMT112Q9UI30 125 aaKnown RBP13.9□□□□□ -0.18
COL25A1-204ENST00000494183 CTNNA3Q9UI47 895 aa13.9□□□□□ -0.18
COL25A1-204ENST00000494183 NSD2O96028 1365 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 RAPGEF6Q8TEU7 1601 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 NKTRP30414 1462 aaKnown RBP13.89□□□□□ -0.19
COL25A1-204ENST00000494183 GPTP24298 496 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 UPF3BQ9BZI7 483 aaKnown RBP13.89□□□□□ -0.19
COL25A1-204ENST00000494183 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 ZSCAN29Q8IWY8 852 aaPredicted RBP13.89□□□□□ -0.19
COL25A1-204ENST00000494183 GOLGA6L1Q8N7Z2 621 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 CCDC8Q9H0W5 538 aaPredicted RBP13.89□□□□□ -0.19
COL25A1-204ENST00000494183 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 KAT6BQ8WYB5 2073 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 IFIT5Q13325 482 aaKnown RBP13.89□□□□□ -0.19
COL25A1-204ENST00000494183 OLFM4Q6UX06 510 aa13.89□□□□□ -0.19
COL25A1-204ENST00000494183 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
COL25A1-204ENST00000494183 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
COL25A1-204ENST00000494183 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
COL25A1-204ENST00000494183 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
COL25A1-204ENST00000494183 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
COL25A1-204ENST00000494183 AIDAQ96BJ3 306 aa13.88□□□□□ -0.19
COL25A1-204ENST00000494183 ATP5J2-PTCD1G3V325 749 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-204ENST00000494183 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
COL25A1-204ENST00000494183 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 RAB11FIP3O75154 756 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 UBAC1Q9BSL1 405 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
COL25A1-204ENST00000494183 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-204ENST00000494183 AKAP2Q9Y2D5 859 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 ZNF518AQ6AHZ1 1483 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 UGGT2Q9NYU1 1516 aa13.87□□□□□ -0.19
COL25A1-204ENST00000494183 WDR7Q9Y4E6 1490 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 ME1P48163 572 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 KRT32Q14532 448 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 PRM3Q9NNZ6 103 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
COL25A1-204ENST00000494183 ANKRD36BQ8N2N9 1353 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 MRE11P49959 708 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 HSPA2P54652 639 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
COL25A1-204ENST00000494183 AEBP1Q8IUX7 1158 aa13.85□□□□□ -0.19
COL25A1-204ENST00000494183 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
COL25A1-204ENST00000494183 MAP3K2Q9Y2U5 619 aa13.85□□□□□ -0.19
COL25A1-204ENST00000494183 OFD1O75665 1012 aa13.85□□□□□ -0.19
COL25A1-204ENST00000494183 TXLNAP40222 546 aa13.85□□□□□ -0.19
COL25A1-204ENST00000494183 KRT85P78386 507 aa13.85□□□□□ -0.19
COL25A1-204ENST00000494183 HSP90AB3PQ58FF7 597 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms