RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-215ENST00000494058 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
SKIV2L-215ENST00000494058 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
SKIV2L-215ENST00000494058 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
SKIV2L-215ENST00000494058 KRT27Q7Z3Y8 459 aa17.47■□□□□ 0.39
SKIV2L-215ENST00000494058 HMOX1P09601 288 aa17.46■□□□□ 0.39
SKIV2L-215ENST00000494058 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
SKIV2L-215ENST00000494058 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
SKIV2L-215ENST00000494058 PARP4Q9UKK3 1724 aaKnown RBP17.45■□□□□ 0.38
SKIV2L-215ENST00000494058 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
SKIV2L-215ENST00000494058 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
SKIV2L-215ENST00000494058 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
SKIV2L-215ENST00000494058 RGS12O14924 1447 aa17.44■□□□□ 0.38
SKIV2L-215ENST00000494058 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
SKIV2L-215ENST00000494058 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
SKIV2L-215ENST00000494058 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
SKIV2L-215ENST00000494058 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
SKIV2L-215ENST00000494058 AEBP1Q8IUX7 1158 aa17.43■□□□□ 0.38
SKIV2L-215ENST00000494058 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
SKIV2L-215ENST00000494058 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
SKIV2L-215ENST00000494058 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
SKIV2L-215ENST00000494058 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
SKIV2L-215ENST00000494058 WNK3Q9BYP7 1800 aa17.42■□□□□ 0.38
SKIV2L-215ENST00000494058 MEGF6O75095 1541 aa17.42■□□□□ 0.38
SKIV2L-215ENST00000494058 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
SKIV2L-215ENST00000494058 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
SKIV2L-215ENST00000494058 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
SKIV2L-215ENST00000494058 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
SKIV2L-215ENST00000494058 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
SKIV2L-215ENST00000494058 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
SKIV2L-215ENST00000494058 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
SKIV2L-215ENST00000494058 MIER1Q8N108 512 aa17.38■□□□□ 0.37
SKIV2L-215ENST00000494058 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
SKIV2L-215ENST00000494058 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
SKIV2L-215ENST00000494058 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
SKIV2L-215ENST00000494058 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
SKIV2L-215ENST00000494058 BCL9O00512 1426 aa17.36■□□□□ 0.37
SKIV2L-215ENST00000494058 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
SKIV2L-215ENST00000494058 PHKG2P15735 406 aa17.35■□□□□ 0.37
SKIV2L-215ENST00000494058 NKX1-1Q15270 411 aaPredicted RBP17.35■□□□□ 0.37
SKIV2L-215ENST00000494058 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
SKIV2L-215ENST00000494058 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
SKIV2L-215ENST00000494058 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 CYP27B1O15528 508 aa17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
SKIV2L-215ENST00000494058 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SKIV2L-215ENST00000494058 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
SKIV2L-215ENST00000494058 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
SKIV2L-215ENST00000494058 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
SKIV2L-215ENST00000494058 BRWD3Q6RI45 1802 aa17.32■□□□□ 0.36
SKIV2L-215ENST00000494058 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
SKIV2L-215ENST00000494058 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
SKIV2L-215ENST00000494058 HMGB2P26583 209 aaKnown RBP17.3■□□□□ 0.36
SKIV2L-215ENST00000494058 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
SKIV2L-215ENST00000494058 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
SKIV2L-215ENST00000494058 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
SKIV2L-215ENST00000494058 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
SKIV2L-215ENST00000494058 RIPK4P57078 832 aa17.28■□□□□ 0.36
SKIV2L-215ENST00000494058 TEFQ10587 303 aa17.28■□□□□ 0.36
SKIV2L-215ENST00000494058 FAM182BQ5T319 152 aa17.28■□□□□ 0.36
SKIV2L-215ENST00000494058 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
SKIV2L-215ENST00000494058 CABP4P57796 275 aa17.27■□□□□ 0.36
SKIV2L-215ENST00000494058 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
SKIV2L-215ENST00000494058 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
SKIV2L-215ENST00000494058 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
SKIV2L-215ENST00000494058 TRIM37O94972 964 aa17.26■□□□□ 0.35
SKIV2L-215ENST00000494058 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
SKIV2L-215ENST00000494058 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
SKIV2L-215ENST00000494058 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
SKIV2L-215ENST00000494058 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
SKIV2L-215ENST00000494058 APAF1O14727 1248 aa17.24■□□□□ 0.35
SKIV2L-215ENST00000494058 BAG6P46379 1132 aa17.24■□□□□ 0.35
SKIV2L-215ENST00000494058 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
SKIV2L-215ENST00000494058 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
SKIV2L-215ENST00000494058 APBA3O96018 575 aa17.22■□□□□ 0.35
SKIV2L-215ENST00000494058 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
SKIV2L-215ENST00000494058 SLC52A2Q9HAB3 445 aa17.22■□□□□ 0.35
SKIV2L-215ENST00000494058 NFATC2IPQ8NCF5 419 aa17.21■□□□□ 0.35
SKIV2L-215ENST00000494058 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
SKIV2L-215ENST00000494058 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
SKIV2L-215ENST00000494058 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.34
SKIV2L-215ENST00000494058 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 PLSCR1O15162 318 aa17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
SKIV2L-215ENST00000494058 KCNQ2O43526 872 aa17.19■□□□□ 0.34
SKIV2L-215ENST00000494058 MCM10Q7L590 875 aa17.19■□□□□ 0.34
SKIV2L-215ENST00000494058 PIGBQ92521 554 aa17.19■□□□□ 0.34
SKIV2L-215ENST00000494058 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
SKIV2L-215ENST00000494058 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
SKIV2L-215ENST00000494058 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
SKIV2L-215ENST00000494058 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
SKIV2L-215ENST00000494058 EP400Q96L91 3159 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms