RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DZIP1LQ8IYY4 767 aaKnown RBP13.67□□□□□ -0.22
CLCN6-208ENST00000494028 C19orf44Q9H6X5 657 aa13.67□□□□□ -0.22
CLCN6-208ENST00000494028 KIAA0232Q92628 1395 aa13.67□□□□□ -0.22
CLCN6-208ENST00000494028 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
CLCN6-208ENST00000494028 RGS12O14924 1447 aa13.66□□□□□ -0.22
CLCN6-208ENST00000494028 VAMP4O75379 141 aa13.66□□□□□ -0.22
CLCN6-208ENST00000494028 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
CLCN6-208ENST00000494028 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
CLCN6-208ENST00000494028 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
CLCN6-208ENST00000494028 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
CLCN6-208ENST00000494028 IP6K1Q92551 441 aa13.66□□□□□ -0.22
CLCN6-208ENST00000494028 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
CLCN6-208ENST00000494028 FOXO3O43524 673 aa13.65□□□□□ -0.22
CLCN6-208ENST00000494028 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
CLCN6-208ENST00000494028 MCM10Q7L590 875 aa13.65□□□□□ -0.22
CLCN6-208ENST00000494028 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
CLCN6-208ENST00000494028 GAS2L2Q8NHY3 880 aa13.65□□□□□ -0.22
CLCN6-208ENST00000494028 PARP4Q9UKK3 1724 aaKnown RBP13.64□□□□□ -0.23
CLCN6-208ENST00000494028 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-208ENST00000494028 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
CLCN6-208ENST00000494028 ABCC4O15439 1325 aa13.64□□□□□ -0.23
CLCN6-208ENST00000494028 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
CLCN6-208ENST00000494028 CHL1O00533 1208 aa13.63□□□□□ -0.23
CLCN6-208ENST00000494028 IGHDP01880 384 aa13.63□□□□□ -0.23
CLCN6-208ENST00000494028 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
CLCN6-208ENST00000494028 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
CLCN6-208ENST00000494028 ARHGEF25Q86VW2 580 aa13.62□□□□□ -0.23
CLCN6-208ENST00000494028 TMEM57Q8N5G2 664 aa13.62□□□□□ -0.23
CLCN6-208ENST00000494028 LTV1Q96GA3 475 aaPredicted RBP13.62□□□□□ -0.23
CLCN6-208ENST00000494028 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
CLCN6-208ENST00000494028 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
CLCN6-208ENST00000494028 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
CLCN6-208ENST00000494028 ATF3P18847 181 aa13.61□□□□□ -0.23
CLCN6-208ENST00000494028 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
CLCN6-208ENST00000494028 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
CLCN6-208ENST00000494028 DDX19BQ9UMR2 479 aa13.61□□□□□ -0.23
CLCN6-208ENST00000494028 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
CLCN6-208ENST00000494028 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
CLCN6-208ENST00000494028 GCP02774 474 aa13.6□□□□□ -0.23
CLCN6-208ENST00000494028 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
CLCN6-208ENST00000494028 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
CLCN6-208ENST00000494028 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
CLCN6-208ENST00000494028 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
CLCN6-208ENST00000494028 NPHP3Q7Z494 1330 aa13.59□□□□□ -0.23
CLCN6-208ENST00000494028 PDE4AP27815 886 aa13.58□□□□□ -0.24
CLCN6-208ENST00000494028 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
CLCN6-208ENST00000494028 BACH2Q9BYV9 841 aa13.58□□□□□ -0.24
CLCN6-208ENST00000494028 C5P01031 1676 aa13.57□□□□□ -0.24
CLCN6-208ENST00000494028 SHANK3Q9BYB0 1731 aa13.57□□□□□ -0.24
CLCN6-208ENST00000494028 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
CLCN6-208ENST00000494028 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
CLCN6-208ENST00000494028 ELL2O00472 640 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-208ENST00000494028 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
CLCN6-208ENST00000494028 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
CLCN6-208ENST00000494028 PXDNLA1KZ92 1463 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 MRC1P22897 1456 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 MEGF6O75095 1541 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
CLCN6-208ENST00000494028 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
CLCN6-208ENST00000494028 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
CLCN6-208ENST00000494028 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 ERBB3P21860 1342 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 ATP10DQ9P241 1426 aa13.56□□□□□ -0.24
CLCN6-208ENST00000494028 GLI3P10071 1580 aa13.55□□□□□ -0.24
CLCN6-208ENST00000494028 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-208ENST00000494028 HDAC1Q13547 482 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-208ENST00000494028 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
CLCN6-208ENST00000494028 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
CLCN6-208ENST00000494028 SPATA31A3Q5VYP0 1347 aa13.55□□□□□ -0.24
CLCN6-208ENST00000494028 CPDO75976 1380 aa13.55□□□□□ -0.24
CLCN6-208ENST00000494028 PLEKHG2Q9H7P9 1386 aa13.55□□□□□ -0.24
CLCN6-208ENST00000494028 LAMB4A4D0S4 1761 aa13.54□□□□□ -0.24
CLCN6-208ENST00000494028 MSH5O43196 834 aa13.54□□□□□ -0.24
CLCN6-208ENST00000494028 RGS3P49796 1198 aa13.54□□□□□ -0.24
CLCN6-208ENST00000494028 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
CLCN6-208ENST00000494028 BRINP3Q76B58 766 aa13.53□□□□□ -0.24
CLCN6-208ENST00000494028 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
CLCN6-208ENST00000494028 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
CLCN6-208ENST00000494028 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
CLCN6-208ENST00000494028 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
CLCN6-208ENST00000494028 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
CLCN6-208ENST00000494028 BABAM1Q9NWV8 329 aa13.52□□□□□ -0.25
CLCN6-208ENST00000494028 PTPRCP08575 1304 aa13.52□□□□□ -0.25
CLCN6-208ENST00000494028 SOS1Q07889 1333 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-208ENST00000494028 PAPPAQ13219 1627 aa13.52□□□□□ -0.25
CLCN6-208ENST00000494028 PLCH1Q4KWH8 1693 aa13.51□□□□□ -0.25
CLCN6-208ENST00000494028 COL22A1Q8NFW1 1626 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-208ENST00000494028 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
CLCN6-208ENST00000494028 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-208ENST00000494028 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
CLCN6-208ENST00000494028 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
CLCN6-208ENST00000494028 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
CLCN6-208ENST00000494028 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
CLCN6-208ENST00000494028 AHDC1Q5TGY3 1603 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-208ENST00000494028 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-208ENST00000494028 SMC5Q8IY18 1101 aa13.5□□□□□ -0.25
CLCN6-208ENST00000494028 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-208ENST00000494028 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-208ENST00000494028 ANP32AP39687 249 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms