RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
ZIC4-215ENST00000493664 USP26Q9BXU7 913 aa17.38■□□□□ 0.37
ZIC4-215ENST00000493664 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
ZIC4-215ENST00000493664 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
ZIC4-215ENST00000493664 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
ZIC4-215ENST00000493664 ANKRD44Q8N8A2 993 aa17.38■□□□□ 0.37
ZIC4-215ENST00000493664 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
ZIC4-215ENST00000493664 SDSP20132 328 aa17.37■□□□□ 0.37
ZIC4-215ENST00000493664 EIF4A2Q14240 407 aaKnown RBP17.37■□□□□ 0.37
ZIC4-215ENST00000493664 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
ZIC4-215ENST00000493664 MSH6P52701 1360 aa17.37■□□□□ 0.37
ZIC4-215ENST00000493664 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
ZIC4-215ENST00000493664 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
ZIC4-215ENST00000493664 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
ZIC4-215ENST00000493664 RABEP1Q15276 862 aa17.36■□□□□ 0.37
ZIC4-215ENST00000493664 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
ZIC4-215ENST00000493664 GOLGA6L22H0YM25 854 aa17.36■□□□□ 0.37
ZIC4-215ENST00000493664 NCLP19338 710 aaKnown RBP17.36■□□□□ 0.37
ZIC4-215ENST00000493664 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
ZIC4-215ENST00000493664 RGS12O14924 1447 aa17.36■□□□□ 0.37
ZIC4-215ENST00000493664 PRR36Q9H6K5 1346 aa17.35■□□□□ 0.37
ZIC4-215ENST00000493664 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
ZIC4-215ENST00000493664 SETD1AO15047 1707 aaKnown RBP17.35■□□□□ 0.37
ZIC4-215ENST00000493664 HSP90AB2PQ58FF8 381 aa17.34■□□□□ 0.37
ZIC4-215ENST00000493664 ZGPATQ8N5A5 531 aaKnown RBP17.34■□□□□ 0.37
ZIC4-215ENST00000493664 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
ZIC4-215ENST00000493664 F6X3S4 739 aa17.34■□□□□ 0.37
ZIC4-215ENST00000493664 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
ZIC4-215ENST00000493664 RTL1A6NKG5 1358 aa17.33■□□□□ 0.37
ZIC4-215ENST00000493664 CHL1O00533 1208 aa17.33■□□□□ 0.37
ZIC4-215ENST00000493664 RPAP2Q8IXW5 612 aaPredicted RBP17.33■□□□□ 0.37
ZIC4-215ENST00000493664 FOXO3O43524 673 aa17.33■□□□□ 0.36
ZIC4-215ENST00000493664 TSHZ3Q63HK5 1081 aa17.33■□□□□ 0.36
ZIC4-215ENST00000493664 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
ZIC4-215ENST00000493664 KLHL40Q2TBA0 621 aa17.32■□□□□ 0.36
ZIC4-215ENST00000493664 CAVIN1Q6NZI2 390 aaKnown RBP17.32■□□□□ 0.36
ZIC4-215ENST00000493664 G2E3Q7L622 706 aa17.32■□□□□ 0.36
ZIC4-215ENST00000493664 PTMSP20962 102 aa17.31■□□□□ 0.36
ZIC4-215ENST00000493664 KIF24Q5T7B8 1368 aa17.31■□□□□ 0.36
ZIC4-215ENST00000493664 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
ZIC4-215ENST00000493664 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
ZIC4-215ENST00000493664 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
ZIC4-215ENST00000493664 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
ZIC4-215ENST00000493664 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
ZIC4-215ENST00000493664 CASC1Q6TDU7 716 aa17.29■□□□□ 0.36
ZIC4-215ENST00000493664 LMBRD1Q9NUN5 540 aa17.29■□□□□ 0.36
ZIC4-215ENST00000493664 MON2Q7Z3U7 1717 aa17.29■□□□□ 0.36
ZIC4-215ENST00000493664 NUCB2P80303 420 aa17.28■□□□□ 0.36
ZIC4-215ENST00000493664 PRPF40AO75400 957 aaKnown RBP17.28■□□□□ 0.36
ZIC4-215ENST00000493664 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
ZIC4-215ENST00000493664 EXOC6BQ9Y2D4 811 aa17.28■□□□□ 0.36
ZIC4-215ENST00000493664 ST18O60284 1047 aa17.28■□□□□ 0.36
ZIC4-215ENST00000493664 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
ZIC4-215ENST00000493664 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
ZIC4-215ENST00000493664 C3P01024 1663 aa17.27■□□□□ 0.36
ZIC4-215ENST00000493664 ACEP12821 1306 aa17.27■□□□□ 0.35
ZIC4-215ENST00000493664 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.27■□□□□ 0.35
ZIC4-215ENST00000493664 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.35
ZIC4-215ENST00000493664 PTPRCP08575 1304 aa17.26■□□□□ 0.35
ZIC4-215ENST00000493664 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
ZIC4-215ENST00000493664 PDE4CQ08493 712 aa17.26■□□□□ 0.35
ZIC4-215ENST00000493664 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
ZIC4-215ENST00000493664 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
ZIC4-215ENST00000493664 ERC2O15083 957 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 REC8O95072 547 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
ZIC4-215ENST00000493664 PDE1AP54750 535 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
ZIC4-215ENST00000493664 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 SPATA31D1Q6ZQQ2 1576 aa17.25■□□□□ 0.35
ZIC4-215ENST00000493664 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
ZIC4-215ENST00000493664 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
ZIC4-215ENST00000493664 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
ZIC4-215ENST00000493664 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
ZIC4-215ENST00000493664 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
ZIC4-215ENST00000493664 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
ZIC4-215ENST00000493664 NEK4P51957 841 aa17.24■□□□□ 0.35
ZIC4-215ENST00000493664 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
ZIC4-215ENST00000493664 ANP32BQ92688 251 aaKnown RBP17.23■□□□□ 0.35
ZIC4-215ENST00000493664 PPP1R9BQ96SB3 815 aa17.23■□□□□ 0.35
ZIC4-215ENST00000493664 RBSNQ9H1K0 784 aa17.23■□□□□ 0.35
ZIC4-215ENST00000493664 CRB1P82279 1406 aa17.23■□□□□ 0.35
ZIC4-215ENST00000493664 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
ZIC4-215ENST00000493664 HMMRO75330 724 aa17.22■□□□□ 0.35
ZIC4-215ENST00000493664 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
ZIC4-215ENST00000493664 ZNF445P59923 1031 aa17.22■□□□□ 0.35
ZIC4-215ENST00000493664 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
ZIC4-215ENST00000493664 CWC22Q9HCG8 908 aaKnown RBP17.22■□□□□ 0.35
ZIC4-215ENST00000493664 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
ZIC4-215ENST00000493664 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
ZIC4-215ENST00000493664 PALD1Q9ULE6 856 aa17.21■□□□□ 0.35
ZIC4-215ENST00000493664 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
ZIC4-215ENST00000493664 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
ZIC4-215ENST00000493664 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
ZIC4-215ENST00000493664 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
ZIC4-215ENST00000493664 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
ZIC4-215ENST00000493664 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
ZIC4-215ENST00000493664 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms