RNA–Protein interactions for RNA: ENST00000493283.5

PTCD2-205, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-205ENST00000493283 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
PTCD2-205ENST00000493283 MARCH10Q8NA82 808 aaPredicted RBP19.3■□□□□ 0.68
PTCD2-205ENST00000493283 EP400Q96L91 3159 aa19.3■□□□□ 0.68
PTCD2-205ENST00000493283 PKD1L3Q7Z443 1732 aa19.29■□□□□ 0.68
PTCD2-205ENST00000493283 AMOTQ4VCS5 1084 aa19.29■□□□□ 0.68
PTCD2-205ENST00000493283 USHBP1Q8N6Y0 703 aa19.29■□□□□ 0.68
PTCD2-205ENST00000493283 PPP2R1AP30153 589 aa19.28■□□□□ 0.68
PTCD2-205ENST00000493283 IL13P35225 146 aa19.28■□□□□ 0.68
PTCD2-205ENST00000493283 BCL11BQ9C0K0 894 aaPredicted RBP19.28■□□□□ 0.68
PTCD2-205ENST00000493283 KDRP35968 1356 aa19.28■□□□□ 0.68
PTCD2-205ENST00000493283 TRIM37O94972 964 aa19.27■□□□□ 0.68
PTCD2-205ENST00000493283 HMGB2P26583 209 aaKnown RBP19.27■□□□□ 0.68
PTCD2-205ENST00000493283 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
PTCD2-205ENST00000493283 DDX54Q8TDD1 881 aaKnown RBP19.27■□□□□ 0.68
PTCD2-205ENST00000493283 TNS1Q9HBL0 1735 aaKnown RBP19.27■□□□□ 0.68
PTCD2-205ENST00000493283 RGPD3A6NKT7 1758 aaPredicted RBP19.27■□□□□ 0.67
PTCD2-205ENST00000493283 RGPD4Q7Z3J3 1758 aa19.27■□□□□ 0.67
PTCD2-205ENST00000493283 SBF2Q86WG5 1849 aa19.26■□□□□ 0.67
PTCD2-205ENST00000493283 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
PTCD2-205ENST00000493283 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
PTCD2-205ENST00000493283 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
PTCD2-205ENST00000493283 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
PTCD2-205ENST00000493283 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
PTCD2-205ENST00000493283 APBA3O96018 575 aa19.23■□□□□ 0.67
PTCD2-205ENST00000493283 SULT6B1Q6IMI4 303 aa19.23■□□□□ 0.67
PTCD2-205ENST00000493283 SHANK3Q9BYB0 1731 aa19.22■□□□□ 0.67
PTCD2-205ENST00000493283 PLSCR1O15162 318 aa19.22■□□□□ 0.67
PTCD2-205ENST00000493283 IFNL2Q8IZJ0 200 aa19.22■□□□□ 0.67
PTCD2-205ENST00000493283 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
PTCD2-205ENST00000493283 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
PTCD2-205ENST00000493283 C1orf141Q5JVX7 400 aa19.2■□□□□ 0.66
PTCD2-205ENST00000493283 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
PTCD2-205ENST00000493283 U2SURPO15042 1029 aaKnown RBP19.19■□□□□ 0.66
PTCD2-205ENST00000493283 NEFMP07197 916 aa19.19■□□□□ 0.66
PTCD2-205ENST00000493283 DOT1LQ8TEK3 1739 aa19.17■□□□□ 0.66
PTCD2-205ENST00000493283 CYP27B1O15528 508 aa19.17■□□□□ 0.66
PTCD2-205ENST00000493283 FCHSD2O94868 740 aa19.16■□□□□ 0.66
PTCD2-205ENST00000493283 PHKG2P15735 406 aa19.16■□□□□ 0.66
PTCD2-205ENST00000493283 DEFB132Q7Z7B7 95 aa19.16■□□□□ 0.66
PTCD2-205ENST00000493283 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
PTCD2-205ENST00000493283 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
PTCD2-205ENST00000493283 EN1Q05925 392 aaPredicted RBP19.15■□□□□ 0.66
PTCD2-205ENST00000493283 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
PTCD2-205ENST00000493283 AEBP1Q8IUX7 1158 aa19.15■□□□□ 0.66
PTCD2-205ENST00000493283 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
PTCD2-205ENST00000493283 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
PTCD2-205ENST00000493283 PRKRIP1Q9H875 184 aaPredicted RBP19.15■□□□□ 0.66
PTCD2-205ENST00000493283 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
PTCD2-205ENST00000493283 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
PTCD2-205ENST00000493283 SYTL4Q96C24 671 aaPredicted RBP19.14■□□□□ 0.65
PTCD2-205ENST00000493283 BTAF1O14981 1849 aa19.14■□□□□ 0.65
PTCD2-205ENST00000493283 ERVV-2B6SEH9 535 aa19.13■□□□□ 0.65
PTCD2-205ENST00000493283 HMOX1P09601 288 aa19.13■□□□□ 0.65
PTCD2-205ENST00000493283 PRIM1P49642 420 aaKnown RBP19.13■□□□□ 0.65
PTCD2-205ENST00000493283 AKAP4Q5JQC9 854 aa19.13■□□□□ 0.65
PTCD2-205ENST00000493283 NBPF14Q5TI25 921 aa19.13■□□□□ 0.65
PTCD2-205ENST00000493283 SMARCC1Q92922 1105 aaPredicted RBP19.13■□□□□ 0.65
PTCD2-205ENST00000493283 ACSBG1Q96GR2 724 aa19.13■□□□□ 0.65
PTCD2-205ENST00000493283 RREB1Q92766 1687 aa19.12■□□□□ 0.65
PTCD2-205ENST00000493283 SLC27A3Q5K4L6 730 aa19.12■□□□□ 0.65
PTCD2-205ENST00000493283 ANP32CO43423 234 aa19.11■□□□□ 0.65
PTCD2-205ENST00000493283 KCNQ2O43526 872 aa19.11■□□□□ 0.65
PTCD2-205ENST00000493283 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
PTCD2-205ENST00000493283 EZH2Q15910 746 aaKnown RBP19.09■□□□□ 0.65
PTCD2-205ENST00000493283 RSPH6AQ9H0K4 717 aa19.08■□□□□ 0.64
PTCD2-205ENST00000493283 ITGB4P16144 1822 aa19.07■□□□□ 0.64
PTCD2-205ENST00000493283 PRKAR2BP31323 418 aa19.07■□□□□ 0.64
PTCD2-205ENST00000493283 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTCD2-205ENST00000493283 TXNRD1Q16881 649 aa19.07■□□□□ 0.64
PTCD2-205ENST00000493283 NUP188Q5SRE5 1749 aa19.06■□□□□ 0.64
PTCD2-205ENST00000493283 MPRIPQ6WCQ1 1025 aa19.06■□□□□ 0.64
PTCD2-205ENST00000493283 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
PTCD2-205ENST00000493283 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
PTCD2-205ENST00000493283 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
PTCD2-205ENST00000493283 GNAT3A8MTJ3 354 aa19.05■□□□□ 0.64
PTCD2-205ENST00000493283 CABP4P57796 275 aa19.05■□□□□ 0.64
PTCD2-205ENST00000493283 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
PTCD2-205ENST00000493283 HTATSF1O43719 755 aaKnown RBP19.04■□□□□ 0.64
PTCD2-205ENST00000493283 LY75O60449 1722 aa19.04■□□□□ 0.64
PTCD2-205ENST00000493283 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
PTCD2-205ENST00000493283 PTF1AQ7RTS3 328 aa19.03■□□□□ 0.64
PTCD2-205ENST00000493283 RTF1Q92541 710 aaKnown RBP19.03■□□□□ 0.64
PTCD2-205ENST00000493283 PALLDQ8WX93 1383 aa19.03■□□□□ 0.64
PTCD2-205ENST00000493283 KDM6AO15550 1401 aaPredicted RBP19.02■□□□□ 0.64
PTCD2-205ENST00000493283 PIGBQ92521 554 aa19.02■□□□□ 0.64
PTCD2-205ENST00000493283 MRC1P22897 1456 aa19.02■□□□□ 0.63
PTCD2-205ENST00000493283 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
PTCD2-205ENST00000493283 STK32BQ9NY57 414 aa19.01■□□□□ 0.63
PTCD2-205ENST00000493283 SLC52A2Q9HAB3 445 aa19■□□□□ 0.63
PTCD2-205ENST00000493283 CCNL1Q9UK58 526 aaPredicted RBP19■□□□□ 0.63
PTCD2-205ENST00000493283 ZNF831Q5JPB2 1677 aa18.99■□□□□ 0.63
PTCD2-205ENST00000493283 RNMTO43148 476 aaKnown RBP18.99■□□□□ 0.63
PTCD2-205ENST00000493283 TEFQ10587 303 aa18.99■□□□□ 0.63
PTCD2-205ENST00000493283 LMOD3Q0VAK6 560 aa18.98■□□□□ 0.63
PTCD2-205ENST00000493283 PROM2Q8N271 834 aa18.98■□□□□ 0.63
PTCD2-205ENST00000493283 CEMIPQ8WUJ3 1361 aa18.96■□□□□ 0.63
PTCD2-205ENST00000493283 VIRMAQ69YN4 1812 aaKnown RBP18.96■□□□□ 0.63
PTCD2-205ENST00000493283 NFATC2IPQ8NCF5 419 aa18.96■□□□□ 0.63
PTCD2-205ENST00000493283 PHACTR3Q96KR7 559 aa18.96■□□□□ 0.63
PTCD2-205ENST00000493283 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms