RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 DHX37Q8IY37 1157 aaKnown RBP7.82□□□□□ -1.16
NF1-215ENST00000493220 KIAA1210Q9ULL0 1709 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 PARD3Q8TEW0 1356 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 HSP90AB3PQ58FF7 597 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 KDM4FA0A1W2PPD8 638 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 ZPR1O75312 459 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 SLIT1O75093 1534 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 USP6P35125 1406 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 EIF4A2Q14240 407 aaKnown RBP7.81□□□□□ -1.16
NF1-215ENST00000493220 BECN1Q14457 450 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 KIF24Q5T7B8 1368 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 GNAI3P08754 354 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 CCT4P50991 539 aaKnown RBP7.81□□□□□ -1.16
NF1-215ENST00000493220 AK7Q96M32 723 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 IL16Q14005 1332 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 QRICH2Q9H0J4 1663 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 RRP1P56182 461 aaKnown RBP7.81□□□□□ -1.16
NF1-215ENST00000493220 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 POLKQ9UBT6 870 aa7.81□□□□□ -1.16
NF1-215ENST00000493220 MPRIPQ6WCQ1 1025 aa7.8□□□□□ -1.16
NF1-215ENST00000493220 CLUAP1Q96AJ1 413 aa7.8□□□□□ -1.16
NF1-215ENST00000493220 NOL10Q9BSC4 688 aaKnown RBP7.8□□□□□ -1.16
NF1-215ENST00000493220 TRPC5Q9UL62 973 aaPredicted RBP7.8□□□□□ -1.16
NF1-215ENST00000493220 TMEM131LA2VDJ0 1609 aa7.8□□□□□ -1.16
NF1-215ENST00000493220 UBTFL1P0CB47 393 aaPredicted RBP7.8□□□□□ -1.16
NF1-215ENST00000493220 G3BP1Q13283 466 aaKnown RBP eCLIP7.8□□□□□ -1.16
NF1-215ENST00000493220 KIAA1211Q6ZU35 1233 aa7.8□□□□□ -1.16
NF1-215ENST00000493220 EXOSC9Q06265 439 aaKnown RBP7.8□□□□□ -1.16
NF1-215ENST00000493220 HSP90AB2PQ58FF8 381 aa7.8□□□□□ -1.16
NF1-215ENST00000493220 DCCP43146 1447 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 MAP3K19Q56UN5 1328 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 BRINP3Q76B58 766 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 TNS3Q68CZ2 1445 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 AATKQ6ZMQ8 1374 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 NBPF14Q5TI25 921 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 VPS37DQ86XT2 251 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 C3P01024 1663 aa7.79□□□□□ -1.16
NF1-215ENST00000493220 BCL2L13Q9BXK5 485 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 HYPKQ9NX55 129 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 MROH1Q8NDA8 1641 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 APBB1O00213 710 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 SLC4A2P04920 1241 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 MCM10Q7L590 875 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 NRXN1Q9ULB1 1477 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 IQGAP1P46940 1657 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 RGS3P49796 1198 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 AMOTL1Q8IY63 956 aa7.78□□□□□ -1.16
NF1-215ENST00000493220 SOS1Q07889 1333 aaPredicted RBP7.77□□□□□ -1.16
NF1-215ENST00000493220 SNRPA1P09661 255 aaKnown RBP7.77□□□□□ -1.17
NF1-215ENST00000493220 ALDH1L2Q3SY69 923 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 ERC1Q8IUD2 1116 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 THRAP3Q9Y2W1 955 aaKnown RBP7.77□□□□□ -1.17
NF1-215ENST00000493220 JCADQ9P266 1359 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 ADAMTS13Q76LX8 1427 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 MYL6BP14649 208 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 FGD1P98174 961 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 DDX17Q92841 729 aaKnown RBP7.77□□□□□ -1.17
NF1-215ENST00000493220 SPATA31A6Q5VVP1 1343 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 BCL11BQ9C0K0 894 aaPredicted RBP7.77□□□□□ -1.17
NF1-215ENST00000493220 SPATA31A3Q5VYP0 1347 aa7.77□□□□□ -1.17
NF1-215ENST00000493220 DUSP27Q5VZP5 1158 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 SRCIN1Q9C0H9 1055 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 BABAM1Q9NWV8 329 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 PPLO60437 1756 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 IFIT2P09913 472 aaKnown RBP7.76□□□□□ -1.17
NF1-215ENST00000493220 ARHGAP23Q9P227 1491 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 C1orf167Q5SNV9 1468 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
NF1-215ENST00000493220 INSRP06213 1382 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 RXRBP28702 533 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 CCDC27Q2M243 656 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 CENPQQ7L2Z9 268 aaPredicted RBP7.76□□□□□ -1.17
NF1-215ENST00000493220 TSR2Q969E8 191 aaKnown RBP7.76□□□□□ -1.17
NF1-215ENST00000493220 EYA1Q99502 592 aa7.76□□□□□ -1.17
NF1-215ENST00000493220 DBF4Q9UBU7 674 aaPredicted RBP7.75□□□□□ -1.17
NF1-215ENST00000493220 PTCD1O75127 700 aaKnown RBP7.75□□□□□ -1.17
NF1-215ENST00000493220 TRIM6-TRIM34B2RNG4 842 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 GNAI2P04899 355 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 ATP6V1AP38606 617 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 SLFN5Q08AF3 891 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 TECPR2O15040 1411 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 TCERG1O14776 1098 aaKnown RBP7.75□□□□□ -1.17
NF1-215ENST00000493220 RFC4P35249 363 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 UNC5CLQ8IV45 518 aa7.75□□□□□ -1.17
NF1-215ENST00000493220 GNL3LQ9NVN8 582 aaKnown RBP7.75□□□□□ -1.17
NF1-215ENST00000493220 BLMP54132 1417 aaPredicted RBP7.75□□□□□ -1.17
NF1-215ENST00000493220 IL13P35225 146 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 B4GALNT3Q6L9W6 998 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 QTRT2Q9H974 415 aaKnown RBP7.74□□□□□ -1.17
NF1-215ENST00000493220 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
NF1-215ENST00000493220 SETD1BQ9UPS6 1966 aaKnown RBP7.74□□□□□ -1.17
NF1-215ENST00000493220 ERC2O15083 957 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 PTPRCP08575 1304 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
NF1-215ENST00000493220 FAM98CQ17RN3 349 aaKnown RBP7.74□□□□□ -1.17
NF1-215ENST00000493220 TRIM34Q9BYJ4 488 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms