RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 ZCRB1Q8TBF4 217 aaKnown RBP20.59■□□□□ 0.89
SS18L1-204ENST00000491916 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
SS18L1-204ENST00000491916 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.88
SS18L1-204ENST00000491916 TATP17735 454 aaPredicted RBP20.57■□□□□ 0.88
SS18L1-204ENST00000491916 AEBP1Q8IUX7 1158 aa20.57■□□□□ 0.88
SS18L1-204ENST00000491916 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
SS18L1-204ENST00000491916 KDRP35968 1356 aa20.56■□□□□ 0.88
SS18L1-204ENST00000491916 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
SS18L1-204ENST00000491916 KCNQ2O43526 872 aa20.55■□□□□ 0.88
SS18L1-204ENST00000491916 CYP27B1O15528 508 aa20.54■□□□□ 0.88
SS18L1-204ENST00000491916 DIAPH1O60610 1272 aaKnown RBP20.53■□□□□ 0.88
SS18L1-204ENST00000491916 CAMKK2Q96RR4 588 aa20.53■□□□□ 0.88
SS18L1-204ENST00000491916 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
SS18L1-204ENST00000491916 EN1Q05925 392 aaPredicted RBP20.52■□□□□ 0.88
SS18L1-204ENST00000491916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.52■□□□□ 0.88
SS18L1-204ENST00000491916 NHSQ6T4R5 1651 aa20.51■□□□□ 0.87
SS18L1-204ENST00000491916 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
SS18L1-204ENST00000491916 APBA3O96018 575 aa20.51■□□□□ 0.87
SS18L1-204ENST00000491916 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
SS18L1-204ENST00000491916 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
SS18L1-204ENST00000491916 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
SS18L1-204ENST00000491916 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
SS18L1-204ENST00000491916 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
SS18L1-204ENST00000491916 BAG6P46379 1132 aa20.49■□□□□ 0.87
SS18L1-204ENST00000491916 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
SS18L1-204ENST00000491916 EZH2Q15910 746 aaKnown RBP20.48■□□□□ 0.87
SS18L1-204ENST00000491916 KAT6BQ8WYB5 2073 aa20.47■□□□□ 0.87
SS18L1-204ENST00000491916 RALBP1Q15311 655 aa20.47■□□□□ 0.87
SS18L1-204ENST00000491916 SPG7Q9UQ90 795 aa20.47■□□□□ 0.87
SS18L1-204ENST00000491916 DOT1LQ8TEK3 1739 aa20.47■□□□□ 0.87
SS18L1-204ENST00000491916 TOGARAM1Q9Y4F4 1720 aa20.47■□□□□ 0.87
SS18L1-204ENST00000491916 PLSCR1O15162 318 aa20.46■□□□□ 0.87
SS18L1-204ENST00000491916 HMOX1P09601 288 aa20.46■□□□□ 0.87
SS18L1-204ENST00000491916 PROM2Q8N271 834 aa20.46■□□□□ 0.87
SS18L1-204ENST00000491916 PHKG2P15735 406 aa20.45■□□□□ 0.86
SS18L1-204ENST00000491916 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.86
SS18L1-204ENST00000491916 BTAF1O14981 1849 aa20.45■□□□□ 0.86
SS18L1-204ENST00000491916 RREB1Q92766 1687 aa20.45■□□□□ 0.86
SS18L1-204ENST00000491916 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
SS18L1-204ENST00000491916 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
SS18L1-204ENST00000491916 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
SS18L1-204ENST00000491916 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
SS18L1-204ENST00000491916 AMOTQ4VCS5 1084 aa20.42■□□□□ 0.86
SS18L1-204ENST00000491916 PLEKHO1Q53GL0 409 aaPredicted RBP20.42■□□□□ 0.86
SS18L1-204ENST00000491916 IFNL2Q8IZJ0 200 aa20.42■□□□□ 0.86
SS18L1-204ENST00000491916 SRCAPQ6ZRS2 3230 aa20.42■□□□□ 0.86
SS18L1-204ENST00000491916 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
SS18L1-204ENST00000491916 ITGB4P16144 1822 aa20.41■□□□□ 0.86
SS18L1-204ENST00000491916 NUP188Q5SRE5 1749 aa20.4■□□□□ 0.86
SS18L1-204ENST00000491916 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
SS18L1-204ENST00000491916 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
SS18L1-204ENST00000491916 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
SS18L1-204ENST00000491916 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
SS18L1-204ENST00000491916 MTHFSDQ2M296 383 aaKnown RBP20.38■□□□□ 0.85
SS18L1-204ENST00000491916 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
SS18L1-204ENST00000491916 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
SS18L1-204ENST00000491916 PIGBQ92521 554 aa20.36■□□□□ 0.85
SS18L1-204ENST00000491916 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
SS18L1-204ENST00000491916 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
SS18L1-204ENST00000491916 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
SS18L1-204ENST00000491916 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
SS18L1-204ENST00000491916 LY75O60449 1722 aa20.34■□□□□ 0.85
SS18L1-204ENST00000491916 FCHSD2O94868 740 aa20.34■□□□□ 0.85
SS18L1-204ENST00000491916 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
SS18L1-204ENST00000491916 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
SS18L1-204ENST00000491916 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
SS18L1-204ENST00000491916 LRRC4BQ9NT99 713 aa20.34■□□□□ 0.85
SS18L1-204ENST00000491916 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
SS18L1-204ENST00000491916 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
SS18L1-204ENST00000491916 SCN11AQ9UI33 1791 aa20.32■□□□□ 0.84
SS18L1-204ENST00000491916 ERVV-2B6SEH9 535 aa20.32■□□□□ 0.84
SS18L1-204ENST00000491916 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
SS18L1-204ENST00000491916 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
SS18L1-204ENST00000491916 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
SS18L1-204ENST00000491916 ANO8Q9HCE9 1232 aaPredicted RBP20.32■□□□□ 0.84
SS18L1-204ENST00000491916 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
SS18L1-204ENST00000491916 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
SS18L1-204ENST00000491916 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
SS18L1-204ENST00000491916 KCNQ4P56696 695 aa20.29■□□□□ 0.84
SS18L1-204ENST00000491916 ASAP1Q9ULH1 1129 aa20.29■□□□□ 0.84
SS18L1-204ENST00000491916 RNMTO43148 476 aaKnown RBP20.28■□□□□ 0.84
SS18L1-204ENST00000491916 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
SS18L1-204ENST00000491916 TMOD3Q9NYL9 352 aa20.28■□□□□ 0.84
SS18L1-204ENST00000491916 MRC1P22897 1456 aa20.27■□□□□ 0.84
SS18L1-204ENST00000491916 PALLDQ8WX93 1383 aa20.27■□□□□ 0.84
SS18L1-204ENST00000491916 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
SS18L1-204ENST00000491916 SLC27A3Q5K4L6 730 aa20.27■□□□□ 0.84
SS18L1-204ENST00000491916 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
SS18L1-204ENST00000491916 PSDA5PKW4 1024 aaPredicted RBP20.26■□□□□ 0.83
SS18L1-204ENST00000491916 R3HDM1Q15032 1099 aaKnown RBP20.26■□□□□ 0.83
SS18L1-204ENST00000491916 IL17REQ8NFR9 667 aa20.26■□□□□ 0.83
SS18L1-204ENST00000491916 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
SS18L1-204ENST00000491916 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
SS18L1-204ENST00000491916 CABP4P57796 275 aa20.24■□□□□ 0.83
SS18L1-204ENST00000491916 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
SS18L1-204ENST00000491916 CEMIPQ8WUJ3 1361 aa20.23■□□□□ 0.83
SS18L1-204ENST00000491916 GNAT3A8MTJ3 354 aa20.23■□□□□ 0.83
SS18L1-204ENST00000491916 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
SS18L1-204ENST00000491916 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
SS18L1-204ENST00000491916 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms