RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 BCL11BQ9C0K0 894 aaPredicted RBP31.5■■■□□ 2.63
CPNE9-204ENST00000491802 PLEKHG2Q9H7P9 1386 aa31.5■■■□□ 2.63
CPNE9-204ENST00000491802 RREB1Q92766 1687 aa31.5■■■□□ 2.63
CPNE9-204ENST00000491802 PKD1L3Q7Z443 1732 aa31.49■■■□□ 2.63
CPNE9-204ENST00000491802 DDX10Q13206 875 aaKnown RBP31.49■■■□□ 2.63
CPNE9-204ENST00000491802 TATP17735 454 aaPredicted RBP31.48■■■□□ 2.63
CPNE9-204ENST00000491802 CAMKK2Q96RR4 588 aa31.48■■■□□ 2.63
CPNE9-204ENST00000491802 APBA3O96018 575 aa31.47■■■□□ 2.63
CPNE9-204ENST00000491802 EN1Q05925 392 aaPredicted RBP31.47■■■□□ 2.63
CPNE9-204ENST00000491802 ZCRB1Q8TBF4 217 aaKnown RBP31.47■■■□□ 2.63
CPNE9-204ENST00000491802 IGSF1Q8N6C5 1336 aa31.47■■■□□ 2.63
CPNE9-204ENST00000491802 PLSCR1O15162 318 aa31.44■■■□□ 2.62
CPNE9-204ENST00000491802 DDX54Q8TDD1 881 aaKnown RBP31.43■■■□□ 2.62
CPNE9-204ENST00000491802 COL3A1P02461 1466 aaPredicted RBP31.41■■■□□ 2.62
CPNE9-204ENST00000491802 IL13P35225 146 aa31.41■■■□□ 2.62
CPNE9-204ENST00000491802 NUP188Q5SRE5 1749 aa31.41■■■□□ 2.62
CPNE9-204ENST00000491802 EZH2Q15910 746 aaKnown RBP31.4■■■□□ 2.62
CPNE9-204ENST00000491802 KAT6BQ8WYB5 2073 aa31.39■■■□□ 2.62
CPNE9-204ENST00000491802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.39■■■□□ 2.62
CPNE9-204ENST00000491802 PCDH11XQ9BZA7 1347 aa31.39■■■□□ 2.62
CPNE9-204ENST00000491802 PCDH11YQ9BZA8 1340 aa31.39■■■□□ 2.62
CPNE9-204ENST00000491802 PPP2R1AP30153 589 aa31.38■■■□□ 2.61
CPNE9-204ENST00000491802 DOT1LQ8TEK3 1739 aa31.38■■■□□ 2.61
CPNE9-204ENST00000491802 BTAF1O14981 1849 aa31.38■■■□□ 2.61
CPNE9-204ENST00000491802 PTF1AQ7RTS3 328 aa31.37■■■□□ 2.61
CPNE9-204ENST00000491802 DIAPH1O60610 1272 aaKnown RBP31.36■■■□□ 2.61
CPNE9-204ENST00000491802 AEBP1Q8IUX7 1158 aa31.35■■■□□ 2.61
CPNE9-204ENST00000491802 KCNQ2O43526 872 aa31.34■■■□□ 2.61
CPNE9-204ENST00000491802 ACSBG1Q96GR2 724 aa31.34■■■□□ 2.61
CPNE9-204ENST00000491802 KDRP35968 1356 aa31.33■■■□□ 2.61
CPNE9-204ENST00000491802 SULT6B1Q6IMI4 303 aa31.33■■■□□ 2.61
CPNE9-204ENST00000491802 ZNF316A6NFI3 1004 aaPredicted RBP31.32■■■□□ 2.6
CPNE9-204ENST00000491802 CFAP53Q96M91 514 aa31.32■■■□□ 2.6
CPNE9-204ENST00000491802 SPG7Q9UQ90 795 aa31.32■■■□□ 2.6
CPNE9-204ENST00000491802 CYP27B1O15528 508 aa31.29■■■□□ 2.6
CPNE9-204ENST00000491802 NKX1-1Q15270 411 aaPredicted RBP31.28■■■□□ 2.6
CPNE9-204ENST00000491802 TOGARAM1Q9Y4F4 1720 aa31.26■■■□□ 2.59
CPNE9-204ENST00000491802 HMOX1P09601 288 aa31.25■■■□□ 2.59
CPNE9-204ENST00000491802 U2SURPO15042 1029 aaKnown RBP31.24■■■□□ 2.59
CPNE9-204ENST00000491802 RALBP1Q15311 655 aa31.24■■■□□ 2.59
CPNE9-204ENST00000491802 PROM2Q8N271 834 aa31.24■■■□□ 2.59
CPNE9-204ENST00000491802 ITGB4P16144 1822 aa31.24■■■□□ 2.59
CPNE9-204ENST00000491802 SYTL4Q96C24 671 aaPredicted RBP31.23■■■□□ 2.59
CPNE9-204ENST00000491802 LY75O60449 1722 aa31.23■■■□□ 2.59
CPNE9-204ENST00000491802 PRIM1P49642 420 aaKnown RBP31.22■■■□□ 2.59
CPNE9-204ENST00000491802 PLEKHO1Q53GL0 409 aaPredicted RBP31.22■■■□□ 2.59
CPNE9-204ENST00000491802 PHKG2P15735 406 aa31.21■■■□□ 2.59
CPNE9-204ENST00000491802 TXNRD1Q16881 649 aa31.21■■■□□ 2.59
CPNE9-204ENST00000491802 AMOTQ4VCS5 1084 aa31.21■■■□□ 2.59
CPNE9-204ENST00000491802 NBPF14Q5TI25 921 aa31.21■■■□□ 2.59
CPNE9-204ENST00000491802 IFNL2Q8IZJ0 200 aa31.21■■■□□ 2.59
CPNE9-204ENST00000491802 PAPPAQ13219 1627 aa31.18■■■□□ 2.58
CPNE9-204ENST00000491802 ZNF530Q6P9A1 599 aaPredicted RBP31.18■■■□□ 2.58
CPNE9-204ENST00000491802 NUDCQ9Y266 331 aa31.18■■■□□ 2.58
CPNE9-204ENST00000491802 MYBBP1AQ9BQG0 1328 aaKnown RBP31.15■■■□□ 2.58
CPNE9-204ENST00000491802 R3HDM1Q15032 1099 aaKnown RBP31.14■■■□□ 2.58
CPNE9-204ENST00000491802 SLC27A3Q5K4L6 730 aa31.13■■■□□ 2.57
CPNE9-204ENST00000491802 PSDA5PKW4 1024 aaPredicted RBP31.12■■■□□ 2.57
CPNE9-204ENST00000491802 HSP90AB1P08238 724 aaKnown RBP31.12■■■□□ 2.57
CPNE9-204ENST00000491802 C1orf141Q5JVX7 400 aa31.12■■■□□ 2.57
CPNE9-204ENST00000491802 LRP5O75197 1615 aa31.12■■■□□ 2.57
CPNE9-204ENST00000491802 U2AF1L5P0DN76 240 aaPredicted RBP31.11■■■□□ 2.57
CPNE9-204ENST00000491802 U2AF1Q01081 240 aaKnown RBP eCLIP31.11■■■□□ 2.57
CPNE9-204ENST00000491802 PRKRIP1Q9H875 184 aaPredicted RBP31.11■■■□□ 2.57
CPNE9-204ENST00000491802 KDM6AO15550 1401 aaPredicted RBP31.1■■■□□ 2.57
CPNE9-204ENST00000491802 MPRIPQ6WCQ1 1025 aa31.09■■■□□ 2.57
CPNE9-204ENST00000491802 DCAF5Q96JK2 942 aa31.09■■■□□ 2.57
CPNE9-204ENST00000491802 ANO8Q9HCE9 1232 aaPredicted RBP31.09■■■□□ 2.57
CPNE9-204ENST00000491802 RSPH6AQ9H0K4 717 aa31.08■■■□□ 2.57
CPNE9-204ENST00000491802 SCN11AQ9UI33 1791 aa31.07■■■□□ 2.56
CPNE9-204ENST00000491802 ERVV-2B6SEH9 535 aa31.06■■■□□ 2.56
CPNE9-204ENST00000491802 PRKAR2BP31323 418 aa31.06■■■□□ 2.56
CPNE9-204ENST00000491802 MTHFSDQ2M296 383 aaKnown RBP31.06■■■□□ 2.56
CPNE9-204ENST00000491802 LRRC4BQ9NT99 713 aa31.06■■■□□ 2.56
CPNE9-204ENST00000491802 CASZ1Q86V15 1759 aa31.05■■■□□ 2.56
CPNE9-204ENST00000491802 QSER1Q2KHR3 1735 aa31.05■■■□□ 2.56
CPNE9-204ENST00000491802 SRCAPQ6ZRS2 3230 aa31.04■■■□□ 2.56
CPNE9-204ENST00000491802 AKAP4Q5JQC9 854 aa31.04■■■□□ 2.56
CPNE9-204ENST00000491802 PIGBQ92521 554 aa31.04■■■□□ 2.56
CPNE9-204ENST00000491802 SMARCC1Q92922 1105 aaPredicted RBP31.04■■■□□ 2.56
CPNE9-204ENST00000491802 TMOD3Q9NYL9 352 aa31.04■■■□□ 2.56
CPNE9-204ENST00000491802 ADAMTS7Q9UKP4 1686 aa31.03■■■□□ 2.56
CPNE9-204ENST00000491802 HMGB2P26583 209 aaKnown RBP31.03■■■□□ 2.56
CPNE9-204ENST00000491802 SLC15A2Q16348 729 aa31.03■■■□□ 2.56
CPNE9-204ENST00000491802 STK32BQ9NY57 414 aa31.03■■■□□ 2.56
CPNE9-204ENST00000491802 VIRMAQ69YN4 1812 aaKnown RBP31.03■■■□□ 2.56
CPNE9-204ENST00000491802 TAF1LQ8IZX4 1826 aa31.02■■■□□ 2.56
CPNE9-204ENST00000491802 PALLDQ8WX93 1383 aa31.02■■■□□ 2.56
CPNE9-204ENST00000491802 FCHSD2O94868 740 aa31■■■□□ 2.55
CPNE9-204ENST00000491802 GAS2L2Q8NHY3 880 aa31■■■□□ 2.55
CPNE9-204ENST00000491802 C5P01031 1676 aa31■■■□□ 2.55
CPNE9-204ENST00000491802 ZNF831Q5JPB2 1677 aa30.99■■■□□ 2.55
CPNE9-204ENST00000491802 PHACTR3Q96KR7 559 aa30.98■■■□□ 2.55
CPNE9-204ENST00000491802 CCNL1Q9UK58 526 aaPredicted RBP30.98■■■□□ 2.55
CPNE9-204ENST00000491802 MAP3K5Q99683 1374 aa30.97■■■□□ 2.55
CPNE9-204ENST00000491802 AKT1S1Q96B36 256 aa30.97■■■□□ 2.55
CPNE9-204ENST00000491802 MRC1P22897 1456 aa30.96■■■□□ 2.55
CPNE9-204ENST00000491802 CABP4P57796 275 aa30.96■■■□□ 2.55
CPNE9-204ENST00000491802 TUBGCP6Q96RT7 1819 aa30.94■■■□□ 2.54
CPNE9-204ENST00000491802 KCNQ4P56696 695 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms