RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.77
PHC3-213ENST00000491258 GDF11O95390 407 aa10.21□□□□□ -0.77
PHC3-213ENST00000491258 FBXO45P0C2W1 286 aa10.21□□□□□ -0.77
PHC3-213ENST00000491258 IL27Q8NEV9 243 aa10.21□□□□□ -0.77
PHC3-213ENST00000491258 MEN1O00255 615 aa10.2□□□□□ -0.78
PHC3-213ENST00000491258 SLURP2P0DP57 97 aa10.2□□□□□ -0.78
PHC3-213ENST00000491258 CUEDC1Q9NWM3 386 aaPredicted RBP10.2□□□□□ -0.78
PHC3-213ENST00000491258 RNF144AP50876 292 aaPredicted RBP10.19□□□□□ -0.78
PHC3-213ENST00000491258 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
PHC3-213ENST00000491258 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
PHC3-213ENST00000491258 A0A1W2PRU2 124 aa10.16□□□□□ -0.78
PHC3-213ENST00000491258 ARHGEF15O94989 841 aa10.16□□□□□ -0.78
PHC3-213ENST00000491258 MARSP56192 900 aaKnown RBP10.16□□□□□ -0.78
PHC3-213ENST00000491258 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
PHC3-213ENST00000491258 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
PHC3-213ENST00000491258 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
PHC3-213ENST00000491258 GPC1P35052 558 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 IRS1P35568 1242 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 MAP3K10Q02779 954 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 SRSF11Q05519 484 aaKnown RBP10.14□□□□□ -0.79
PHC3-213ENST00000491258 NR1H3Q13133 447 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 GAS6Q14393 721 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 SLC27A3Q5K4L6 730 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 LYPD4Q6UWN0 246 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 ZNF837Q96EG3 531 aaPredicted RBP10.14□□□□□ -0.79
PHC3-213ENST00000491258 NLRP3Q96P20 1036 aa10.14□□□□□ -0.79
PHC3-213ENST00000491258 GPR25O00155 361 aa10.13□□□□□ -0.79
PHC3-213ENST00000491258 CYP2U1Q7Z449 544 aa10.13□□□□□ -0.79
PHC3-213ENST00000491258 POU4F2Q12837 409 aa10.12□□□□□ -0.79
PHC3-213ENST00000491258 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
PHC3-213ENST00000491258 TRIM22Q8IYM9 498 aa10.12□□□□□ -0.79
PHC3-213ENST00000491258 GAS2L1Q99501 681 aaPredicted RBP10.12□□□□□ -0.79
PHC3-213ENST00000491258 ESF1Q9H501 851 aaKnown RBP10.12□□□□□ -0.79
PHC3-213ENST00000491258 ZNF330Q9Y3S2 320 aaPredicted RBP10.12□□□□□ -0.79
PHC3-213ENST00000491258 PCDHB11Q9Y5F2 797 aa10.12□□□□□ -0.79
PHC3-213ENST00000491258 SCTRP47872 440 aa10.11□□□□□ -0.79
PHC3-213ENST00000491258 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
PHC3-213ENST00000491258 CELA2BP08218 269 aaPredicted RBP10.1□□□□□ -0.79
PHC3-213ENST00000491258 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
PHC3-213ENST00000491258 GMCL1Q96IK5 515 aa10.1□□□□□ -0.79
PHC3-213ENST00000491258 DBN1Q16643 649 aa10.09□□□□□ -0.79
PHC3-213ENST00000491258 SCARF2Q96GP6 870 aaPredicted RBP10.09□□□□□ -0.79
PHC3-213ENST00000491258 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
PHC3-213ENST00000491258 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
PHC3-213ENST00000491258 DYRK1BQ9Y463 629 aa10.09□□□□□ -0.79
PHC3-213ENST00000491258 DNMT3AQ9Y6K1 912 aaPredicted RBP10.09□□□□□ -0.79
PHC3-213ENST00000491258 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
PHC3-213ENST00000491258 CLN3Q13286 438 aa10.08□□□□□ -0.8
PHC3-213ENST00000491258 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
PHC3-213ENST00000491258 GTPBP3Q969Y2 492 aaKnown RBP10.08□□□□□ -0.8
PHC3-213ENST00000491258 IGF1RP08069 1367 aa10.07□□□□□ -0.8
PHC3-213ENST00000491258 H7C1W4 665 aa10.07□□□□□ -0.8
PHC3-213ENST00000491258 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
PHC3-213ENST00000491258 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
PHC3-213ENST00000491258 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
PHC3-213ENST00000491258 GRIP2Q9C0E4 1043 aa10.07□□□□□ -0.8
PHC3-213ENST00000491258 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
PHC3-213ENST00000491258 IGHA1P01876 353 aa10.06□□□□□ -0.8
PHC3-213ENST00000491258 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
PHC3-213ENST00000491258 KANK3Q6NY19 840 aa10.06□□□□□ -0.8
PHC3-213ENST00000491258 TRERF1Q96PN7 1200 aa10.06□□□□□ -0.8
PHC3-213ENST00000491258 ENAMQ9NRM1 1142 aa10.06□□□□□ -0.8
PHC3-213ENST00000491258 RAB6BQ9NRW1 208 aa10.06□□□□□ -0.8
PHC3-213ENST00000491258 GPR37L1O60883 481 aa10.05□□□□□ -0.8
PHC3-213ENST00000491258 GPAT2Q6NUI2 795 aa10.05□□□□□ -0.8
PHC3-213ENST00000491258 TIMMDC1Q9NPL8 285 aa10.05□□□□□ -0.8
PHC3-213ENST00000491258 SNRKQ9NRH2 765 aa10.05□□□□□ -0.8
PHC3-213ENST00000491258 APBB1O00213 710 aa10.04□□□□□ -0.8
PHC3-213ENST00000491258 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
PHC3-213ENST00000491258 TRAK2O60296 914 aa10.04□□□□□ -0.8
PHC3-213ENST00000491258 TAS1R3Q7RTX0 852 aa10.04□□□□□ -0.8
PHC3-213ENST00000491258 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
PHC3-213ENST00000491258 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
PHC3-213ENST00000491258 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
PHC3-213ENST00000491258 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
PHC3-213ENST00000491258 SOCS7O14512 581 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 F11P03951 625 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 BCRP11274 1271 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 FOXK2Q01167 660 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 WDR44Q5JSH3 913 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 NEDD1Q8NHV4 660 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 CNKSR1Q969H4 720 aa10.01□□□□□ -0.81
PHC3-213ENST00000491258 GNRH1P01148 92 aa10□□□□□ -0.81
PHC3-213ENST00000491258 MX2P20592 715 aa10□□□□□ -0.81
PHC3-213ENST00000491258 ESYT1Q9BSJ8 1104 aa10□□□□□ -0.81
PHC3-213ENST00000491258 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
PHC3-213ENST00000491258 GPAMQ9HCL2 828 aa10□□□□□ -0.81
PHC3-213ENST00000491258 IL2RAP01589 272 aa9.99□□□□□ -0.81
PHC3-213ENST00000491258 PHKA2P46019 1235 aa9.99□□□□□ -0.81
PHC3-213ENST00000491258 CENPCQ03188 943 aa9.99□□□□□ -0.81
PHC3-213ENST00000491258 ACDQ96AP0 544 aa9.99□□□□□ -0.81
PHC3-213ENST00000491258 CCDC85AQ96PX6 553 aaPredicted RBP9.99□□□□□ -0.81
PHC3-213ENST00000491258 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
PHC3-213ENST00000491258 NSFL1CQ9UNZ2 370 aaKnown RBP9.99□□□□□ -0.81
PHC3-213ENST00000491258 CNTNAP5Q8WYK1 1306 aa9.99□□□□□ -0.81
PHC3-213ENST00000491258 PHF20L1A8MW92 1017 aa9.98□□□□□ -0.81
PHC3-213ENST00000491258 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
PHC3-213ENST00000491258 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms