RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 NFAT5O94916 1531 aa12.06□□□□□ -0.48
HPS4-215ENST00000491142 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
HPS4-215ENST00000491142 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
HPS4-215ENST00000491142 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
HPS4-215ENST00000491142 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
HPS4-215ENST00000491142 NLRP2Q9NX02 1062 aa12.06□□□□□ -0.48
HPS4-215ENST00000491142 IL2RBP14784 551 aa12.05□□□□□ -0.48
HPS4-215ENST00000491142 KCNQ4P56696 695 aa12.04□□□□□ -0.48
HPS4-215ENST00000491142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.48
HPS4-215ENST00000491142 MIER1Q8N108 512 aa12.04□□□□□ -0.48
HPS4-215ENST00000491142 NLGN2Q8NFZ4 835 aa12.04□□□□□ -0.48
HPS4-215ENST00000491142 ABCC6O95255 1503 aa12.04□□□□□ -0.48
HPS4-215ENST00000491142 ERBB3P21860 1342 aa12.04□□□□□ -0.48
HPS4-215ENST00000491142 KTN1Q86UP2 1357 aaKnown RBP12.04□□□□□ -0.48
HPS4-215ENST00000491142 BTAF1O14981 1849 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 POLD1P28340 1107 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 SLC16A10Q8TF71 515 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
HPS4-215ENST00000491142 NME9Q86XW9 330 aa12.02□□□□□ -0.49
HPS4-215ENST00000491142 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
HPS4-215ENST00000491142 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
HPS4-215ENST00000491142 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
HPS4-215ENST00000491142 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
HPS4-215ENST00000491142 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
HPS4-215ENST00000491142 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
HPS4-215ENST00000491142 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
HPS4-215ENST00000491142 YBX3P16989 372 aaKnown RBP eCLIP12□□□□□ -0.49
HPS4-215ENST00000491142 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
HPS4-215ENST00000491142 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
HPS4-215ENST00000491142 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
HPS4-215ENST00000491142 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
HPS4-215ENST00000491142 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
HPS4-215ENST00000491142 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
HPS4-215ENST00000491142 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
HPS4-215ENST00000491142 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
HPS4-215ENST00000491142 CD163L1Q9NR16 1453 aa11.96□□□□□ -0.49
HPS4-215ENST00000491142 GRIN3BO60391 1043 aa11.96□□□□□ -0.49
HPS4-215ENST00000491142 QSER1Q2KHR3 1735 aa11.96□□□□□ -0.49
HPS4-215ENST00000491142 MON2Q7Z3U7 1717 aa11.96□□□□□ -0.49
HPS4-215ENST00000491142 LTN1O94822 1766 aa11.95□□□□□ -0.5
HPS4-215ENST00000491142 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
HPS4-215ENST00000491142 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
HPS4-215ENST00000491142 IP6K1Q92551 441 aa11.95□□□□□ -0.5
HPS4-215ENST00000491142 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
HPS4-215ENST00000491142 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
HPS4-215ENST00000491142 NSD2O96028 1365 aa11.94□□□□□ -0.5
HPS4-215ENST00000491142 ANKRD36BQ8N2N9 1353 aa11.94□□□□□ -0.5
HPS4-215ENST00000491142 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
HPS4-215ENST00000491142 CCNL1Q9UK58 526 aaPredicted RBP11.94□□□□□ -0.5
HPS4-215ENST00000491142 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
HPS4-215ENST00000491142 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
HPS4-215ENST00000491142 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
HPS4-215ENST00000491142 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
HPS4-215ENST00000491142 FBLN1P23142 703 aa11.92□□□□□ -0.5
HPS4-215ENST00000491142 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
HPS4-215ENST00000491142 GPBP1L1Q9HC44 474 aaPredicted RBP11.92□□□□□ -0.5
HPS4-215ENST00000491142 ZNF526Q8TF50 670 aaPredicted RBP11.91□□□□□ -0.5
HPS4-215ENST00000491142 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
HPS4-215ENST00000491142 LY75O60449 1722 aa11.91□□□□□ -0.5
HPS4-215ENST00000491142 HOXC9P31274 260 aa11.9□□□□□ -0.5
HPS4-215ENST00000491142 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
HPS4-215ENST00000491142 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
HPS4-215ENST00000491142 CD2APQ9Y5K6 639 aa11.9□□□□□ -0.5
HPS4-215ENST00000491142 A0A1W2PP64 1363 aa11.9□□□□□ -0.5
HPS4-215ENST00000491142 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
HPS4-215ENST00000491142 HSPA6P17066 643 aa11.89□□□□□ -0.51
HPS4-215ENST00000491142 TERF2IPQ9NYB0 399 aa11.89□□□□□ -0.51
HPS4-215ENST00000491142 MEGF6O75095 1541 aa11.89□□□□□ -0.51
HPS4-215ENST00000491142 USP47Q96K76 1375 aa11.89□□□□□ -0.51
HPS4-215ENST00000491142 AMPHP49418 695 aa11.88□□□□□ -0.51
HPS4-215ENST00000491142 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
HPS4-215ENST00000491142 ADCY9O60503 1353 aa11.88□□□□□ -0.51
HPS4-215ENST00000491142 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
HPS4-215ENST00000491142 USHBP1Q8N6Y0 703 aa11.87□□□□□ -0.51
HPS4-215ENST00000491142 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
HPS4-215ENST00000491142 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
HPS4-215ENST00000491142 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
HPS4-215ENST00000491142 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
HPS4-215ENST00000491142 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
HPS4-215ENST00000491142 COG3Q96JB2 828 aa11.86□□□□□ -0.51
HPS4-215ENST00000491142 RGPD2P0DJD1 1756 aa11.86□□□□□ -0.51
HPS4-215ENST00000491142 FLAD1Q8NFF5 587 aa11.85□□□□□ -0.51
HPS4-215ENST00000491142 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
HPS4-215ENST00000491142 RRS1Q15050 365 aaKnown RBP11.84□□□□□ -0.51
HPS4-215ENST00000491142 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
HPS4-215ENST00000491142 IGSF1Q8N6C5 1336 aa11.84□□□□□ -0.51
HPS4-215ENST00000491142 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
HPS4-215ENST00000491142 KIF3CO14782 793 aa11.83□□□□□ -0.52
HPS4-215ENST00000491142 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
HPS4-215ENST00000491142 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
HPS4-215ENST00000491142 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
HPS4-215ENST00000491142 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
HPS4-215ENST00000491142 C5P01031 1676 aa11.83□□□□□ -0.52
HPS4-215ENST00000491142 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
HPS4-215ENST00000491142 PHF14O94880 888 aa11.82□□□□□ -0.52
HPS4-215ENST00000491142 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
HPS4-215ENST00000491142 TATP17735 454 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms