RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CNTNAP3BQ96NU0 1288 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 CNTNAP3Q9BZ76 1288 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 STK17AQ9UEE5 414 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 A0A1W2PRU2 124 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 VAC14Q08AM6 782 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 POU4F2Q12837 409 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 USP4Q13107 963 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 OXLD1Q5BKU9 147 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 TMEM214Q6NUQ4 689 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 CYP2U1Q7Z449 544 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 CCDC125Q86Z20 511 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 GJD4Q96KN9 370 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 GDPD2Q9HCC8 539 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 TBC1D2BQ9UPU7 963 aa3.72□□□□□ -1.81
SNRNP40-207ENST00000491106 ERBB4Q15303 1308 aa3.71□□□□□ -1.81
SNRNP40-207ENST00000491106 PHKA2P46019 1235 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 RNF135Q8IUD6 432 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 MTMR14Q8NCE2 650 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 SIRT1Q96EB6 747 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 RAB6BQ9NRW1 208 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 CEP126Q9P2H0 1117 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 DOLKQ9UPQ8 538 aa3.71□□□□□ -1.82
SNRNP40-207ENST00000491106 ESPNB1AK53 854 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 WIPF1O43516 503 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 LILRA1O75019 489 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 CSB-PGBD3P0DP91 1061 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 MARSP56192 900 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 WASHC4Q2M389 1173 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 PGBD3Q8N328 593 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 AIDAQ96BJ3 306 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 COL25A1Q9BXS0 654 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 ARHGEF10LQ9HCE6 1279 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 TIMMDC1Q9NPL8 285 aa3.7□□□□□ -1.82
SNRNP40-207ENST00000491106 ITGA6P23229 1130 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 RNF144AP50876 292 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 PSME1Q06323 249 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 ESCO1Q5FWF5 840 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 GNASQ5JWF2 1037 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 SVOPQ8N4V2 548 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 RNF217Q8TC41 542 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 CNKSR1Q969H4 720 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 TRERF1Q96PN7 1200 aa3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 ZSCAN10Q96SZ4 725 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-207ENST00000491106 H7C1W4 665 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 GNRH1P01148 92 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 UBTFP17480 764 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 SCTRP47872 440 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 MAP3K10Q02779 954 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 CENPCQ03188 943 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 GPR161Q8N6U8 529 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 CDCA7Q9BWT1 371 aaPredicted RBP3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 GPAMQ9HCL2 828 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 NEUROD4Q9HD90 331 aa3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 RBM19Q9Y4C8 960 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-207ENST00000491106 SLC35F4A4IF30 521 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 GPR25O00155 361 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 ERVK-9P63128 1117 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 TSGA10IPQ3SY00 556 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 TAS1R3Q7RTX0 852 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 NEDD1Q8NHV4 660 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 GTPBP3Q969Y2 492 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 ENAMQ9NRM1 1142 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 SERTAD1Q9UHV2 236 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 NSFL1CQ9UNZ2 370 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 GJA3Q9Y6H8 435 aa3.67□□□□□ -1.82
SNRNP40-207ENST00000491106 SKIP12755 728 aa3.66□□□□□ -1.82
SNRNP40-207ENST00000491106 ARSJQ5FYB0 599 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-207ENST00000491106 FOXD4L5Q5VV16 416 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-207ENST00000491106 CCDC85AQ96PX6 553 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-207ENST00000491106 ESYT1Q9BSJ8 1104 aa3.66□□□□□ -1.82
SNRNP40-207ENST00000491106 WASLO00401 505 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 F11P03951 625 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 GPC1P35052 558 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 FLIIQ13045 1269 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 CLN3Q13286 438 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 TLR1Q15399 786 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 DBN1Q16643 649 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 EML3Q32P44 896 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 MAP7D1Q3KQU3 841 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 NBPF10Q6P3W6 841 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 NBPF15Q8N660 670 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 NUCKS1Q9H1E3 243 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 OSBPL3Q9H4L5 887 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 RRAGCQ9HB90 399 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 DYRK1BQ9Y463 629 aa3.65□□□□□ -1.83
SNRNP40-207ENST00000491106 ADAMTS2O95450 1211 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 STAU1O95793 577 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 MX2P20592 715 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 AMPD1P23109 780 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 SOX11P35716 441 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 EFHC2Q5JST6 749 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 HDGFL1Q5TGJ6 251 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 BICDL1Q6ZP65 573 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 TRIM22Q8IYM9 498 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 DEPDC4Q8N2C3 294 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 KDF1Q8NAX2 398 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 PLPP7Q8NBV4 271 aa3.64□□□□□ -1.83
SNRNP40-207ENST00000491106 NANOS1Q8WY41 292 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms