RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 EP400Q96L91 3159 aa19.07■□□□□ 0.64
FRAT1-202ENST00000490980 BAG6P46379 1132 aa19.06■□□□□ 0.64
FRAT1-202ENST00000490980 ZCRB1Q8TBF4 217 aaKnown RBP19.06■□□□□ 0.64
FRAT1-202ENST00000490980 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
FRAT1-202ENST00000490980 PLEKHG2Q9H7P9 1386 aa19.05■□□□□ 0.64
FRAT1-202ENST00000490980 COL3A1P02461 1466 aaPredicted RBP19.04■□□□□ 0.64
FRAT1-202ENST00000490980 DEFB132Q7Z7B7 95 aa19.04■□□□□ 0.64
FRAT1-202ENST00000490980 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
FRAT1-202ENST00000490980 BTAF1O14981 1849 aa19.03■□□□□ 0.64
FRAT1-202ENST00000490980 IL13P35225 146 aa19.03■□□□□ 0.64
FRAT1-202ENST00000490980 RREB1Q92766 1687 aa19.03■□□□□ 0.64
FRAT1-202ENST00000490980 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
FRAT1-202ENST00000490980 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
FRAT1-202ENST00000490980 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
FRAT1-202ENST00000490980 KAT6BQ8WYB5 2073 aa19.01■□□□□ 0.63
FRAT1-202ENST00000490980 APBA3O96018 575 aa19.01■□□□□ 0.63
FRAT1-202ENST00000490980 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
FRAT1-202ENST00000490980 BCL11BQ9C0K0 894 aaPredicted RBP19.01■□□□□ 0.63
FRAT1-202ENST00000490980 DIAPH1O60610 1272 aaKnown RBP19■□□□□ 0.63
FRAT1-202ENST00000490980 SPG7Q9UQ90 795 aa19■□□□□ 0.63
FRAT1-202ENST00000490980 KDRP35968 1356 aa18.99■□□□□ 0.63
FRAT1-202ENST00000490980 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
FRAT1-202ENST00000490980 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
FRAT1-202ENST00000490980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.63
FRAT1-202ENST00000490980 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
FRAT1-202ENST00000490980 TOGARAM1Q9Y4F4 1720 aa18.99■□□□□ 0.63
FRAT1-202ENST00000490980 ITGB4P16144 1822 aa18.98■□□□□ 0.63
FRAT1-202ENST00000490980 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
FRAT1-202ENST00000490980 SULT6B1Q6IMI4 303 aa18.97■□□□□ 0.63
FRAT1-202ENST00000490980 PTF1AQ7RTS3 328 aa18.97■□□□□ 0.63
FRAT1-202ENST00000490980 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
FRAT1-202ENST00000490980 ACSBG1Q96GR2 724 aa18.97■□□□□ 0.63
FRAT1-202ENST00000490980 CYP27B1O15528 508 aa18.96■□□□□ 0.63
FRAT1-202ENST00000490980 KCNQ2O43526 872 aa18.96■□□□□ 0.63
FRAT1-202ENST00000490980 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
FRAT1-202ENST00000490980 PLSCR1O15162 318 aa18.94■□□□□ 0.62
FRAT1-202ENST00000490980 RALBP1Q15311 655 aa18.94■□□□□ 0.62
FRAT1-202ENST00000490980 EZH2Q15910 746 aaKnown RBP18.94■□□□□ 0.62
FRAT1-202ENST00000490980 VIRMAQ69YN4 1812 aaKnown RBP18.93■□□□□ 0.62
FRAT1-202ENST00000490980 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
FRAT1-202ENST00000490980 PLEKHO1Q53GL0 409 aaPredicted RBP18.93■□□□□ 0.62
FRAT1-202ENST00000490980 LY75O60449 1722 aa18.92■□□□□ 0.62
FRAT1-202ENST00000490980 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
FRAT1-202ENST00000490980 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
FRAT1-202ENST00000490980 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
FRAT1-202ENST00000490980 HMOX1P09601 288 aa18.91■□□□□ 0.62
FRAT1-202ENST00000490980 PHKG2P15735 406 aa18.91■□□□□ 0.62
FRAT1-202ENST00000490980 PRIM1P49642 420 aaKnown RBP18.9■□□□□ 0.62
FRAT1-202ENST00000490980 SYTL4Q96C24 671 aaPredicted RBP18.9■□□□□ 0.62
FRAT1-202ENST00000490980 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
FRAT1-202ENST00000490980 SCN11AQ9UI33 1791 aa18.9■□□□□ 0.62
FRAT1-202ENST00000490980 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
FRAT1-202ENST00000490980 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
FRAT1-202ENST00000490980 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
FRAT1-202ENST00000490980 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
FRAT1-202ENST00000490980 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
FRAT1-202ENST00000490980 ADAMTS7Q9UKP4 1686 aa18.85■□□□□ 0.61
FRAT1-202ENST00000490980 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
FRAT1-202ENST00000490980 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
FRAT1-202ENST00000490980 PROM2Q8N271 834 aa18.84■□□□□ 0.61
FRAT1-202ENST00000490980 DCAF5Q96JK2 942 aa18.84■□□□□ 0.61
FRAT1-202ENST00000490980 PRKRIP1Q9H875 184 aaPredicted RBP18.84■□□□□ 0.61
FRAT1-202ENST00000490980 PAPPAQ13219 1627 aa18.84■□□□□ 0.61
FRAT1-202ENST00000490980 KDM6AO15550 1401 aaPredicted RBP18.83■□□□□ 0.61
FRAT1-202ENST00000490980 MPRIPQ6WCQ1 1025 aa18.83■□□□□ 0.6
FRAT1-202ENST00000490980 AKAP4Q5JQC9 854 aa18.82■□□□□ 0.6
FRAT1-202ENST00000490980 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
FRAT1-202ENST00000490980 RSPH6AQ9H0K4 717 aa18.82■□□□□ 0.6
FRAT1-202ENST00000490980 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
FRAT1-202ENST00000490980 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
FRAT1-202ENST00000490980 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
FRAT1-202ENST00000490980 MTHFSDQ2M296 383 aaKnown RBP18.81■□□□□ 0.6
FRAT1-202ENST00000490980 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
FRAT1-202ENST00000490980 C5P01031 1676 aa18.81■□□□□ 0.6
FRAT1-202ENST00000490980 FCHSD2O94868 740 aa18.8■□□□□ 0.6
FRAT1-202ENST00000490980 SLC27A3Q5K4L6 730 aa18.8■□□□□ 0.6
FRAT1-202ENST00000490980 PIGBQ92521 554 aa18.8■□□□□ 0.6
FRAT1-202ENST00000490980 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
FRAT1-202ENST00000490980 QSER1Q2KHR3 1735 aa18.79■□□□□ 0.6
FRAT1-202ENST00000490980 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
FRAT1-202ENST00000490980 DLG5Q8TDM6 1919 aa18.78■□□□□ 0.6
FRAT1-202ENST00000490980 MRC1P22897 1456 aa18.78■□□□□ 0.6
FRAT1-202ENST00000490980 PSDA5PKW4 1024 aaPredicted RBP18.78■□□□□ 0.6
FRAT1-202ENST00000490980 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
FRAT1-202ENST00000490980 SMARCC1Q92922 1105 aaPredicted RBP18.78■□□□□ 0.6
FRAT1-202ENST00000490980 ZNF831Q5JPB2 1677 aa18.78■□□□□ 0.6
FRAT1-202ENST00000490980 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.6
FRAT1-202ENST00000490980 SIPA1L3O60292 1781 aaPredicted RBP18.77■□□□□ 0.6
FRAT1-202ENST00000490980 MAP3K5Q99683 1374 aa18.77■□□□□ 0.6
FRAT1-202ENST00000490980 CABP4P57796 275 aa18.76■□□□□ 0.59
FRAT1-202ENST00000490980 ANO8Q9HCE9 1232 aaPredicted RBP18.76■□□□□ 0.59
FRAT1-202ENST00000490980 LRRC4BQ9NT99 713 aa18.76■□□□□ 0.59
FRAT1-202ENST00000490980 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
FRAT1-202ENST00000490980 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
FRAT1-202ENST00000490980 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
FRAT1-202ENST00000490980 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
FRAT1-202ENST00000490980 RNMTO43148 476 aaKnown RBP18.74■□□□□ 0.59
FRAT1-202ENST00000490980 STK32BQ9NY57 414 aa18.74■□□□□ 0.59
FRAT1-202ENST00000490980 NEFMP07197 916 aa18.73■□□□□ 0.59
FRAT1-202ENST00000490980 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms