RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
ARHGEF39-205ENST00000490638 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
ARHGEF39-205ENST00000490638 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
ARHGEF39-205ENST00000490638 NFXL1Q6ZNB6 911 aa17.46■□□□□ 0.39
ARHGEF39-205ENST00000490638 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
ARHGEF39-205ENST00000490638 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 ABCC1P33527 1531 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 ANXA1P04083 346 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
ARHGEF39-205ENST00000490638 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
ARHGEF39-205ENST00000490638 EYA1Q99502 592 aa17.44■□□□□ 0.38
ARHGEF39-205ENST00000490638 IL1RAPL2Q9NP60 686 aa17.44■□□□□ 0.38
ARHGEF39-205ENST00000490638 IP6K1Q92551 441 aa17.44■□□□□ 0.38
ARHGEF39-205ENST00000490638 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
ARHGEF39-205ENST00000490638 RPAP2Q8IXW5 612 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF39-205ENST00000490638 A0A087WZG4 1122 aa17.43■□□□□ 0.38
ARHGEF39-205ENST00000490638 NRDCO43847 1150 aa17.43■□□□□ 0.38
ARHGEF39-205ENST00000490638 PHF14O94880 888 aa17.42■□□□□ 0.38
ARHGEF39-205ENST00000490638 FLIIQ13045 1269 aa17.42■□□□□ 0.38
ARHGEF39-205ENST00000490638 CDC45O75419 566 aa17.42■□□□□ 0.38
ARHGEF39-205ENST00000490638 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
ARHGEF39-205ENST00000490638 MCTP1Q6DN14 999 aa17.42■□□□□ 0.38
ARHGEF39-205ENST00000490638 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
ARHGEF39-205ENST00000490638 RFC4P35249 363 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 AKAP4Q5JQC9 854 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 AACSQ86V21 672 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 EXOC6BQ9Y2D4 811 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 FOXD4L6Q3SYB3 417 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 FOXD4L3Q6VB84 417 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 HOXC9P31274 260 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
ARHGEF39-205ENST00000490638 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 GOLGA6L6A8MZA4 724 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 TRIM29Q14134 588 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
ARHGEF39-205ENST00000490638 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 RBM5P52756 815 aaKnown RBP eCLIP17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 IFIT5Q13325 482 aaKnown RBP17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
ARHGEF39-205ENST00000490638 IPO9Q96P70 1041 aaKnown RBP17.38■□□□□ 0.37
ARHGEF39-205ENST00000490638 GZF1Q9H116 711 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF39-205ENST00000490638 ABCF2Q9UG63 623 aa17.38■□□□□ 0.37
ARHGEF39-205ENST00000490638 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
ARHGEF39-205ENST00000490638 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
ARHGEF39-205ENST00000490638 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 HIP1O00291 1037 aa17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 SLC4A3P48751 1232 aa17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 RRP12Q5JTH9 1297 aaKnown RBP17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 ANKRD13DQ6ZTN6 518 aa17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
ARHGEF39-205ENST00000490638 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 IKQ13123 557 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 DNTTIP2Q5QJE6 756 aaKnown RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 RPGRQ92834 1020 aaKnown RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 SYAP1Q96A49 352 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 LRP2BPQ9P2M1 347 aa17.36■□□□□ 0.37
ARHGEF39-205ENST00000490638 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 MAP3K2Q9Y2U5 619 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 RAI14Q9P0K7 980 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
ARHGEF39-205ENST00000490638 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
ARHGEF39-205ENST00000490638 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
ARHGEF39-205ENST00000490638 COPS6Q7L5N1 327 aa17.34■□□□□ 0.37
ARHGEF39-205ENST00000490638 SLC3A2P08195 630 aaKnown RBP17.34■□□□□ 0.37
ARHGEF39-205ENST00000490638 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
ARHGEF39-205ENST00000490638 DRC7Q8IY82 874 aa17.33■□□□□ 0.37
ARHGEF39-205ENST00000490638 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.37
ARHGEF39-205ENST00000490638 ARHGEF10O15013 1369 aa17.33■□□□□ 0.37
ARHGEF39-205ENST00000490638 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.37
ARHGEF39-205ENST00000490638 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.37
ARHGEF39-205ENST00000490638 KIF1BPQ96EK5 621 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms