RNA–Protein interactions for RNA: ENST00000490406.1

SERBP1-207, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

TSL 5

Gene SERBP1, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-207ENST00000490406 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
SERBP1-207ENST00000490406 DDX54Q8TDD1 881 aaKnown RBP16.96■□□□□ 0.31
SERBP1-207ENST00000490406 BTAF1O14981 1849 aa16.95■□□□□ 0.3
SERBP1-207ENST00000490406 PRIM1P49642 420 aaKnown RBP16.94■□□□□ 0.3
SERBP1-207ENST00000490406 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
SERBP1-207ENST00000490406 COL18A1P39060 1754 aa16.94■□□□□ 0.3
SERBP1-207ENST00000490406 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
SERBP1-207ENST00000490406 ARHGEF28Q8N1W1 1705 aaKnown RBP16.93■□□□□ 0.3
SERBP1-207ENST00000490406 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
SERBP1-207ENST00000490406 KCNQ4P56696 695 aa16.92■□□□□ 0.3
SERBP1-207ENST00000490406 USP47Q96K76 1375 aa16.91■□□□□ 0.3
SERBP1-207ENST00000490406 ERBB3P21860 1342 aa16.91■□□□□ 0.3
SERBP1-207ENST00000490406 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
SERBP1-207ENST00000490406 TTC21BQ7Z4L5 1316 aa16.9■□□□□ 0.3
SERBP1-207ENST00000490406 KIAA1210Q9ULL0 1709 aa16.9■□□□□ 0.3
SERBP1-207ENST00000490406 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.3
SERBP1-207ENST00000490406 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
SERBP1-207ENST00000490406 WDR90Q96KV7 1748 aa16.88■□□□□ 0.29
SERBP1-207ENST00000490406 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
SERBP1-207ENST00000490406 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
SERBP1-207ENST00000490406 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
SERBP1-207ENST00000490406 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
SERBP1-207ENST00000490406 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
SERBP1-207ENST00000490406 HTRA3P83110 453 aa16.87■□□□□ 0.29
SERBP1-207ENST00000490406 ANKRD24Q8TF21 1146 aa16.87■□□□□ 0.29
SERBP1-207ENST00000490406 TGFB2P61812 414 aa16.86■□□□□ 0.29
SERBP1-207ENST00000490406 AK7Q96M32 723 aa16.85■□□□□ 0.29
SERBP1-207ENST00000490406 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
SERBP1-207ENST00000490406 EVC2Q86UK5 1308 aa16.85■□□□□ 0.29
SERBP1-207ENST00000490406 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
SERBP1-207ENST00000490406 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
SERBP1-207ENST00000490406 RGPD5Q99666 1765 aa16.82■□□□□ 0.28
SERBP1-207ENST00000490406 NBPF1Q3BBV0 1214 aa16.82■□□□□ 0.28
SERBP1-207ENST00000490406 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
SERBP1-207ENST00000490406 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
SERBP1-207ENST00000490406 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
SERBP1-207ENST00000490406 RRAGCQ9HB90 399 aa16.79■□□□□ 0.28
SERBP1-207ENST00000490406 TUBGCP6Q96RT7 1819 aa16.78■□□□□ 0.28
SERBP1-207ENST00000490406 FCHSD2O94868 740 aa16.78■□□□□ 0.28
SERBP1-207ENST00000490406 SSFA2P28290 1259 aa16.78■□□□□ 0.28
SERBP1-207ENST00000490406 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
SERBP1-207ENST00000490406 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
SERBP1-207ENST00000490406 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
SERBP1-207ENST00000490406 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
SERBP1-207ENST00000490406 LY75O60449 1722 aa16.76■□□□□ 0.27
SERBP1-207ENST00000490406 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
SERBP1-207ENST00000490406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.76■□□□□ 0.27
SERBP1-207ENST00000490406 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
SERBP1-207ENST00000490406 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
SERBP1-207ENST00000490406 PHF14O94880 888 aa16.75■□□□□ 0.27
SERBP1-207ENST00000490406 IP6K1Q92551 441 aa16.75■□□□□ 0.27
SERBP1-207ENST00000490406 NFAT5O94916 1531 aa16.75■□□□□ 0.27
SERBP1-207ENST00000490406 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
SERBP1-207ENST00000490406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
SERBP1-207ENST00000490406 NLGN1Q8N2Q7 840 aa16.74■□□□□ 0.27
SERBP1-207ENST00000490406 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
SERBP1-207ENST00000490406 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
SERBP1-207ENST00000490406 VEGFAP15692 232 aaPredicted RBP16.73■□□□□ 0.27
SERBP1-207ENST00000490406 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
SERBP1-207ENST00000490406 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
SERBP1-207ENST00000490406 NSD2O96028 1365 aa16.73■□□□□ 0.27
SERBP1-207ENST00000490406 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
SERBP1-207ENST00000490406 MMP10P09238 476 aa16.71■□□□□ 0.27
SERBP1-207ENST00000490406 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
SERBP1-207ENST00000490406 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
SERBP1-207ENST00000490406 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
SERBP1-207ENST00000490406 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
SERBP1-207ENST00000490406 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
SERBP1-207ENST00000490406 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
SERBP1-207ENST00000490406 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
SERBP1-207ENST00000490406 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
SERBP1-207ENST00000490406 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
SERBP1-207ENST00000490406 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
SERBP1-207ENST00000490406 TMF1P82094 1093 aa16.68■□□□□ 0.26
SERBP1-207ENST00000490406 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
SERBP1-207ENST00000490406 AMPHP49418 695 aa16.67■□□□□ 0.26
SERBP1-207ENST00000490406 DALRD3Q5D0E6 543 aaKnown RBP16.67■□□□□ 0.26
SERBP1-207ENST00000490406 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
SERBP1-207ENST00000490406 KCPQ6ZWJ8 1503 aa16.66■□□□□ 0.26
SERBP1-207ENST00000490406 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
SERBP1-207ENST00000490406 DPEP1P16444 411 aa16.66■□□□□ 0.26
SERBP1-207ENST00000490406 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
SERBP1-207ENST00000490406 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
SERBP1-207ENST00000490406 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
SERBP1-207ENST00000490406 C5P01031 1676 aa16.65■□□□□ 0.26
SERBP1-207ENST00000490406 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
SERBP1-207ENST00000490406 NME9Q86XW9 330 aa16.65■□□□□ 0.26
SERBP1-207ENST00000490406 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
SERBP1-207ENST00000490406 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
SERBP1-207ENST00000490406 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
SERBP1-207ENST00000490406 DOT1LQ8TEK3 1739 aa16.65■□□□□ 0.26
SERBP1-207ENST00000490406 GNPATO15228 680 aa16.64■□□□□ 0.25
SERBP1-207ENST00000490406 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
SERBP1-207ENST00000490406 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
SERBP1-207ENST00000490406 DCAF5Q96JK2 942 aa16.63■□□□□ 0.25
SERBP1-207ENST00000490406 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
SERBP1-207ENST00000490406 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
SERBP1-207ENST00000490406 SIK1P57059 783 aa16.62■□□□□ 0.25
SERBP1-207ENST00000490406 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
SERBP1-207ENST00000490406 FOXN1O15353 648 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms