RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
SNX5-214ENST00000490175 NFAT5O94916 1531 aa20.38■□□□□ 0.85
SNX5-214ENST00000490175 PSME1Q06323 249 aa20.38■□□□□ 0.85
SNX5-214ENST00000490175 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
SNX5-214ENST00000490175 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
SNX5-214ENST00000490175 KCNH5Q8NCM2 988 aa20.37■□□□□ 0.85
SNX5-214ENST00000490175 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
SNX5-214ENST00000490175 SMC5Q8IY18 1101 aa20.36■□□□□ 0.85
SNX5-214ENST00000490175 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
SNX5-214ENST00000490175 ZBTB7BO15156 539 aaPredicted RBP20.35■□□□□ 0.85
SNX5-214ENST00000490175 IP6K1Q92551 441 aa20.34■□□□□ 0.85
SNX5-214ENST00000490175 KIF1AQ12756 1690 aa20.34■□□□□ 0.85
SNX5-214ENST00000490175 FOXO3O43524 673 aa20.32■□□□□ 0.84
SNX5-214ENST00000490175 GNAT3A8MTJ3 354 aa20.31■□□□□ 0.84
SNX5-214ENST00000490175 DEKP35659 375 aaKnown RBP20.31■□□□□ 0.84
SNX5-214ENST00000490175 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
SNX5-214ENST00000490175 SLIT3O75094 1523 aa20.3■□□□□ 0.84
SNX5-214ENST00000490175 PTPRCP08575 1304 aa20.3■□□□□ 0.84
SNX5-214ENST00000490175 TSPYL4Q9UJ04 414 aa20.3■□□□□ 0.84
SNX5-214ENST00000490175 MAP3K5Q99683 1374 aa20.29■□□□□ 0.84
SNX5-214ENST00000490175 BABAM1Q9NWV8 329 aa20.29■□□□□ 0.84
SNX5-214ENST00000490175 TRPM3Q9HCF6 1732 aaPredicted RBP20.29■□□□□ 0.84
SNX5-214ENST00000490175 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
SNX5-214ENST00000490175 NBR1Q14596 966 aa20.28■□□□□ 0.84
SNX5-214ENST00000490175 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
SNX5-214ENST00000490175 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
SNX5-214ENST00000490175 KRT24Q2M2I5 525 aa20.27■□□□□ 0.84
SNX5-214ENST00000490175 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.84
SNX5-214ENST00000490175 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
SNX5-214ENST00000490175 MST1RQ04912 1400 aa20.27■□□□□ 0.84
SNX5-214ENST00000490175 GCC1Q96CN9 775 aa20.27■□□□□ 0.84
SNX5-214ENST00000490175 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
SNX5-214ENST00000490175 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
SNX5-214ENST00000490175 NUCB1Q02818 461 aa20.26■□□□□ 0.83
SNX5-214ENST00000490175 MSH6P52701 1360 aa20.26■□□□□ 0.83
SNX5-214ENST00000490175 RGS12O14924 1447 aa20.26■□□□□ 0.83
SNX5-214ENST00000490175 USP19O94966 1318 aa20.25■□□□□ 0.83
SNX5-214ENST00000490175 DCCP43146 1447 aa20.25■□□□□ 0.83
SNX5-214ENST00000490175 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
SNX5-214ENST00000490175 GCP02774 474 aa20.24■□□□□ 0.83
SNX5-214ENST00000490175 MIS18AQ9NYP9 233 aa20.24■□□□□ 0.83
SNX5-214ENST00000490175 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
SNX5-214ENST00000490175 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
SNX5-214ENST00000490175 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
SNX5-214ENST00000490175 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
SNX5-214ENST00000490175 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
SNX5-214ENST00000490175 IL17REQ8NFR9 667 aa20.22■□□□□ 0.83
SNX5-214ENST00000490175 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
SNX5-214ENST00000490175 CACNA1FO60840 1977 aa20.21■□□□□ 0.83
SNX5-214ENST00000490175 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
SNX5-214ENST00000490175 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
SNX5-214ENST00000490175 UPF2Q9HAU5 1272 aaKnown RBP20.2■□□□□ 0.83
SNX5-214ENST00000490175 USHBP1Q8N6Y0 703 aa20.2■□□□□ 0.82
SNX5-214ENST00000490175 ALS2Q96Q42 1657 aa20.2■□□□□ 0.82
SNX5-214ENST00000490175 CEMIPQ8WUJ3 1361 aa20.2■□□□□ 0.82
SNX5-214ENST00000490175 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 FAM208AQ9UK61 1670 aaKnown RBP20.19■□□□□ 0.82
SNX5-214ENST00000490175 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 LMO7Q8WWI1 1683 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 CAMTA1Q9Y6Y1 1673 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 SEC24BO95487 1268 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 ATF3P18847 181 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 SIRT2Q8IXJ6 389 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
SNX5-214ENST00000490175 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
SNX5-214ENST00000490175 STRCP1A6NGW2 1772 aa20.18■□□□□ 0.82
SNX5-214ENST00000490175 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
SNX5-214ENST00000490175 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
SNX5-214ENST00000490175 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
SNX5-214ENST00000490175 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
SNX5-214ENST00000490175 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
SNX5-214ENST00000490175 RPAP2Q8IXW5 612 aaPredicted RBP20.16■□□□□ 0.82
SNX5-214ENST00000490175 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
SNX5-214ENST00000490175 CCT4P50991 539 aaKnown RBP20.15■□□□□ 0.82
SNX5-214ENST00000490175 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
SNX5-214ENST00000490175 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
SNX5-214ENST00000490175 ANKRD45Q5TZF3 282 aa20.15■□□□□ 0.82
SNX5-214ENST00000490175 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
SNX5-214ENST00000490175 AKAP4Q5JQC9 854 aa20.14■□□□□ 0.81
SNX5-214ENST00000490175 ANKRD44Q8N8A2 993 aa20.14■□□□□ 0.81
SNX5-214ENST00000490175 ATP10DQ9P241 1426 aa20.14■□□□□ 0.81
SNX5-214ENST00000490175 ANKRD24Q8TF21 1146 aa20.14■□□□□ 0.81
SNX5-214ENST00000490175 CHMP4AQ9BY43 222 aa20.14■□□□□ 0.81
SNX5-214ENST00000490175 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
SNX5-214ENST00000490175 KDM3BQ7LBC6 1761 aa20.13■□□□□ 0.81
SNX5-214ENST00000490175 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
SNX5-214ENST00000490175 TBC1D32Q96NH3 1257 aa20.13■□□□□ 0.81
SNX5-214ENST00000490175 DCTPP1Q9H773 170 aa20.13■□□□□ 0.81
SNX5-214ENST00000490175 G2E3Q7L622 706 aa20.12■□□□□ 0.81
SNX5-214ENST00000490175 LRRC59Q96AG4 307 aaKnown RBP20.12■□□□□ 0.81
SNX5-214ENST00000490175 LMTK3Q96Q04 1460 aa20.12■□□□□ 0.81
SNX5-214ENST00000490175 N4BP2Q86UW6 1770 aaPredicted RBP20.12■□□□□ 0.81
SNX5-214ENST00000490175 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
SNX5-214ENST00000490175 HOXB7P09629 217 aa20.11■□□□□ 0.81
SNX5-214ENST00000490175 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
SNX5-214ENST00000490175 CEP85Q6P2H3 762 aa20.1■□□□□ 0.81
SNX5-214ENST00000490175 ZNF530Q6P9A1 599 aaPredicted RBP20.1■□□□□ 0.81
SNX5-214ENST00000490175 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
SNX5-214ENST00000490175 FLIIQ13045 1269 aa20.1■□□□□ 0.81
SNX5-214ENST00000490175 NPHP3Q7Z494 1330 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms