RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ERMP1Q7Z2K6 904 aa4.52□□□□□ -1.69
UBXN4-208ENST00000490163 SPACA7Q96KW9 195 aa4.52□□□□□ -1.69
UBXN4-208ENST00000490163 DNAAF2Q9NVR5 837 aaKnown RBP4.52□□□□□ -1.69
UBXN4-208ENST00000490163 LHX6Q9UPM6 363 aa4.52□□□□□ -1.69
UBXN4-208ENST00000490163 ST13P50502 369 aaKnown RBP4.52□□□□□ -1.69
UBXN4-208ENST00000490163 XKR5Q6UX68 686 aa4.52□□□□□ -1.69
UBXN4-208ENST00000490163 ARMC2Q8NEN0 867 aa4.52□□□□□ -1.69
UBXN4-208ENST00000490163 MSRB2Q9Y3D2 182 aa4.52□□□□□ -1.69
UBXN4-208ENST00000490163 ATP1A2P50993 1020 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 DPYDQ12882 1025 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 SEPT12Q8IYM1 358 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 METTL14Q9HCE5 456 aaKnown RBP4.51□□□□□ -1.69
UBXN4-208ENST00000490163 SUGT1Q9Y2Z0 365 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 PTPREP23469 700 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 GRIPAP1Q4V328 841 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 PLEKHG4Q58EX7 1191 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 LARP1Q6PKG0 1096 aaKnown RBP4.51□□□□□ -1.69
UBXN4-208ENST00000490163 FBF1Q8TES7 1133 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 PNMA3Q9UL41 463 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 DOK7Q18PE1 504 aa4.51□□□□□ -1.69
UBXN4-208ENST00000490163 RPUSD2Q8IZ73 545 aaKnown RBP4.51□□□□□ -1.69
UBXN4-208ENST00000490163 NUTM2BA6NNL0 878 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-208ENST00000490163 NUTM2EB1AL46 878 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-208ENST00000490163 NCOA4Q13772 614 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 EML3Q32P44 896 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 NUTM2DQ5VT03 806 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-208ENST00000490163 NUTM2AQ8IVF1 878 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-208ENST00000490163 ZNF454Q8N9F8 522 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 USP35Q9P2H5 1018 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 SMARCA5O60264 1052 aaPredicted RBP4.5□□□□□ -1.69
UBXN4-208ENST00000490163 TSGA10IPQ3SY00 556 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 SDE2Q6IQ49 451 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 PIF1Q9H611 641 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 ITGAEP38570 1179 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 PTK2Q05397 1052 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 KCNH2Q12809 1159 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 ZNF662Q6ZS27 426 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 METRNQ9UJH8 293 aa4.5□□□□□ -1.69
UBXN4-208ENST00000490163 TK2O00142 265 aa4.49□□□□□ -1.69
UBXN4-208ENST00000490163 MCF2L2Q86YR7 1114 aa4.49□□□□□ -1.69
UBXN4-208ENST00000490163 GIPC1O14908 333 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 FAM13AO94988 1023 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 SEC13P55735 322 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 MAP3K10Q02779 954 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 SWT1Q5T5J6 900 aaKnown RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 OGFOD1Q8N543 542 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 SKIP12755 728 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 XRCC5P13010 732 aaKnown RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 FKBP5Q13451 457 aaPredicted RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 EAPPQ56P03 285 aaPredicted RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 MAP4K5Q9Y4K4 846 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 AK5Q9Y6K8 562 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 PLEKHD1A6NEE1 506 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 HRO43593 1189 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 WNT7BP56706 349 aa4.48□□□□□ -1.69
UBXN4-208ENST00000490163 FAM98CQ17RN3 349 aaKnown RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 ZSCAN29Q8IWY8 852 aaPredicted RBP4.48□□□□□ -1.69
UBXN4-208ENST00000490163 FAM160A2Q8N612 972 aaPredicted RBP4.47□□□□□ -1.69
UBXN4-208ENST00000490163 GTF3C2Q8WUA4 911 aaPredicted RBP4.47□□□□□ -1.69
UBXN4-208ENST00000490163 SLC52A1Q9NWF4 448 aa4.47□□□□□ -1.69
UBXN4-208ENST00000490163 BRPF3Q9ULD4 1205 aa4.47□□□□□ -1.69
UBXN4-208ENST00000490163 FUT2Q10981 343 aa4.47□□□□□ -1.69
UBXN4-208ENST00000490163 USB1Q9BQ65 265 aaKnown RBP4.47□□□□□ -1.69
UBXN4-208ENST00000490163 QTRT2Q9H974 415 aaKnown RBP4.47□□□□□ -1.69
UBXN4-208ENST00000490163 TMEM229AB2RXF0 380 aa4.47□□□□□ -1.69
UBXN4-208ENST00000490163 PCGF6Q9BYE7 350 aa4.47□□□□□ -1.69
UBXN4-208ENST00000490163 DNAJC25Q9H1X3 360 aa4.47□□□□□ -1.69
UBXN4-208ENST00000490163 SCNN1DP51172 638 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 ERVK-9P63128 1117 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 ARSIQ5FYB1 569 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 ZNF669Q96BR6 464 aaPredicted RBP4.46□□□□□ -1.7
UBXN4-208ENST00000490163 RASA1P20936 1047 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 RACK1P63244 317 aaKnown RBP4.46□□□□□ -1.7
UBXN4-208ENST00000490163 TCEAL1Q15170 157 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 CCDC144BQ3MJ40 725 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 PURBQ96QR8 312 aaKnown RBP4.46□□□□□ -1.7
UBXN4-208ENST00000490163 KIAA1468Q9P260 1216 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 SLC27A5Q9Y2P5 690 aa4.46□□□□□ -1.7
UBXN4-208ENST00000490163 KLF4O43474 513 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 ERCC5P28715 1186 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-208ENST00000490163 RNF20Q5VTR2 975 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 MYT1LQ9UL68 1186 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 NOD1Q9Y239 953 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 VPS9D1Q9Y2B5 631 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 KCNQ2O43526 872 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 POU3F3P20264 500 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-208ENST00000490163 CDCA8Q53HL2 280 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-208ENST00000490163 GEMIN8Q9NWZ8 242 aaKnown RBP4.45□□□□□ -1.7
UBXN4-208ENST00000490163 PARP2Q9UGN5 583 aa4.45□□□□□ -1.7
UBXN4-208ENST00000490163 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.44□□□□□ -1.7
UBXN4-208ENST00000490163 G3V3G9 751 aa4.44□□□□□ -1.7
UBXN4-208ENST00000490163 GPR182O15218 404 aa4.44□□□□□ -1.7
UBXN4-208ENST00000490163 PBX2P40425 430 aa4.44□□□□□ -1.7
UBXN4-208ENST00000490163 C2orf49Q9BVC5 232 aaPredicted RBP4.44□□□□□ -1.7
UBXN4-208ENST00000490163 CDV3Q9UKY7 258 aaKnown RBP4.44□□□□□ -1.7
UBXN4-208ENST00000490163 EHHADHQ08426 723 aa4.44□□□□□ -1.7
UBXN4-208ENST00000490163 ALG1LQ6GMV1 187 aa4.44□□□□□ -1.7
UBXN4-208ENST00000490163 IQSEC3Q9UPP2 1182 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms