RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 KTN1Q86UP2 1357 aaKnown RBP12.15□□□□□ -0.46
RN7SL239P-201ENST00000490061 FSTL1Q12841 308 aa12.14□□□□□ -0.47
RN7SL239P-201ENST00000490061 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
RN7SL239P-201ENST00000490061 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
RN7SL239P-201ENST00000490061 RAB3GAP2Q9H2M9 1393 aa12.14□□□□□ -0.47
RN7SL239P-201ENST00000490061 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
RN7SL239P-201ENST00000490061 SOX12O15370 315 aa12.13□□□□□ -0.47
RN7SL239P-201ENST00000490061 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
RN7SL239P-201ENST00000490061 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
RN7SL239P-201ENST00000490061 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
RN7SL239P-201ENST00000490061 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
RN7SL239P-201ENST00000490061 TNS4Q8IZW8 715 aa12.12□□□□□ -0.47
RN7SL239P-201ENST00000490061 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
RN7SL239P-201ENST00000490061 LTN1O94822 1766 aa12.11□□□□□ -0.47
RN7SL239P-201ENST00000490061 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
RN7SL239P-201ENST00000490061 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
RN7SL239P-201ENST00000490061 PLEKHG2Q9H7P9 1386 aa12.1□□□□□ -0.47
RN7SL239P-201ENST00000490061 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
RN7SL239P-201ENST00000490061 WDR90Q96KV7 1748 aa12.1□□□□□ -0.47
RN7SL239P-201ENST00000490061 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
RN7SL239P-201ENST00000490061 NSD2O96028 1365 aa12.09□□□□□ -0.47
RN7SL239P-201ENST00000490061 IP6K1Q92551 441 aa12.09□□□□□ -0.47
RN7SL239P-201ENST00000490061 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
RN7SL239P-201ENST00000490061 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.47
RN7SL239P-201ENST00000490061 C5P01031 1676 aa12.08□□□□□ -0.48
RN7SL239P-201ENST00000490061 SSFA2P28290 1259 aa12.08□□□□□ -0.48
RN7SL239P-201ENST00000490061 TGFB2P61812 414 aa12.08□□□□□ -0.48
RN7SL239P-201ENST00000490061 COL13A1Q5TAT6 717 aaPredicted RBP12.08□□□□□ -0.48
RN7SL239P-201ENST00000490061 HDGFL2Q7Z4V5 671 aaPredicted RBP12.08□□□□□ -0.48
RN7SL239P-201ENST00000490061 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
RN7SL239P-201ENST00000490061 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
RN7SL239P-201ENST00000490061 AK7Q96M32 723 aa12.07□□□□□ -0.48
RN7SL239P-201ENST00000490061 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
RN7SL239P-201ENST00000490061 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
RN7SL239P-201ENST00000490061 EDC4Q6P2E9 1401 aaKnown RBP12.06□□□□□ -0.48
RN7SL239P-201ENST00000490061 PCNTO95613 3336 aa12.06□□□□□ -0.48
RN7SL239P-201ENST00000490061 TAF1LQ8IZX4 1826 aa12.05□□□□□ -0.48
RN7SL239P-201ENST00000490061 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
RN7SL239P-201ENST00000490061 KCNQ4P56696 695 aa12.04□□□□□ -0.48
RN7SL239P-201ENST00000490061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.48
RN7SL239P-201ENST00000490061 PUS7Q96PZ0 661 aaKnown RBP12.04□□□□□ -0.48
RN7SL239P-201ENST00000490061 TERF2IPQ9NYB0 399 aa12.04□□□□□ -0.48
RN7SL239P-201ENST00000490061 PALLDQ8WX93 1383 aa12.04□□□□□ -0.48
RN7SL239P-201ENST00000490061 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 RAPGEF4Q8WZA2 1011 aa12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 RTL1A6NKG5 1358 aa12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
RN7SL239P-201ENST00000490061 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
RN7SL239P-201ENST00000490061 CAPN15O75808 1086 aa12.02□□□□□ -0.49
RN7SL239P-201ENST00000490061 SLC34A2O95436 690 aa12.02□□□□□ -0.49
RN7SL239P-201ENST00000490061 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
RN7SL239P-201ENST00000490061 C4BP0C0L5 1744 aa12.02□□□□□ -0.49
RN7SL239P-201ENST00000490061 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.49
RN7SL239P-201ENST00000490061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
RN7SL239P-201ENST00000490061 NME9Q86XW9 330 aa12.01□□□□□ -0.49
RN7SL239P-201ENST00000490061 UBR3Q6ZT12 1888 aa12.01□□□□□ -0.49
RN7SL239P-201ENST00000490061 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
RN7SL239P-201ENST00000490061 AMPHP49418 695 aa12□□□□□ -0.49
RN7SL239P-201ENST00000490061 NLGN1Q8N2Q7 840 aa12□□□□□ -0.49
RN7SL239P-201ENST00000490061 NMRK2Q9NPI5 230 aa12□□□□□ -0.49
RN7SL239P-201ENST00000490061 HOXC9P31274 260 aa11.99□□□□□ -0.49
RN7SL239P-201ENST00000490061 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
RN7SL239P-201ENST00000490061 COG3Q96JB2 828 aa11.99□□□□□ -0.49
RN7SL239P-201ENST00000490061 BCS1LQ9Y276 419 aa11.99□□□□□ -0.49
RN7SL239P-201ENST00000490061 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
RN7SL239P-201ENST00000490061 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
RN7SL239P-201ENST00000490061 TNRC6CQ9HCJ0 1690 aaKnown RBP11.98□□□□□ -0.49
RN7SL239P-201ENST00000490061 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
RN7SL239P-201ENST00000490061 ADRA2BP18089 450 aa11.98□□□□□ -0.49
RN7SL239P-201ENST00000490061 LTV1Q96GA3 475 aaPredicted RBP11.98□□□□□ -0.49
RN7SL239P-201ENST00000490061 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
RN7SL239P-201ENST00000490061 MEGF6O75095 1541 aa11.97□□□□□ -0.49
RN7SL239P-201ENST00000490061 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
RN7SL239P-201ENST00000490061 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
RN7SL239P-201ENST00000490061 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
RN7SL239P-201ENST00000490061 FCHSD2O94868 740 aa11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 PHF14O94880 888 aa11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 MMP10P09238 476 aa11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
RN7SL239P-201ENST00000490061 LOC102724428A0A0B4J2F2 783 aa11.95□□□□□ -0.5
RN7SL239P-201ENST00000490061 SIK1P57059 783 aa11.95□□□□□ -0.5
RN7SL239P-201ENST00000490061 TMF1P82094 1093 aa11.95□□□□□ -0.5
RN7SL239P-201ENST00000490061 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
RN7SL239P-201ENST00000490061 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
RN7SL239P-201ENST00000490061 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
RN7SL239P-201ENST00000490061 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
RN7SL239P-201ENST00000490061 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
RN7SL239P-201ENST00000490061 GNPATO15228 680 aa11.93□□□□□ -0.5
RN7SL239P-201ENST00000490061 VEGFAP15692 232 aaPredicted RBP11.93□□□□□ -0.5
RN7SL239P-201ENST00000490061 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
RN7SL239P-201ENST00000490061 PARP3Q9Y6F1 533 aa11.93□□□□□ -0.5
RN7SL239P-201ENST00000490061 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
RN7SL239P-201ENST00000490061 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
RN7SL239P-201ENST00000490061 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms