RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 RTF1Q92541 710 aaKnown RBP33.56■■■□□ 2.96
KCNC4-207ENST00000489935 MIS18AQ9NYP9 233 aa33.55■■■□□ 2.96
KCNC4-207ENST00000489935 NFAT5O94916 1531 aa33.54■■■□□ 2.96
KCNC4-207ENST00000489935 RTL1A6NKG5 1358 aa33.53■■■□□ 2.96
KCNC4-207ENST00000489935 SMC5Q8IY18 1101 aa33.53■■■□□ 2.96
KCNC4-207ENST00000489935 MYT1Q01538 1121 aa33.52■■■□□ 2.96
KCNC4-207ENST00000489935 API5Q9BZZ5 524 aaKnown RBP33.52■■■□□ 2.96
KCNC4-207ENST00000489935 PROSER2Q86WR7 435 aaPredicted RBP33.51■■■□□ 2.95
KCNC4-207ENST00000489935 IP6K1Q92551 441 aa33.51■■■□□ 2.95
KCNC4-207ENST00000489935 HAP1P54257 671 aaPredicted RBP33.49■■■□□ 2.95
KCNC4-207ENST00000489935 HTATSF1O43719 755 aaKnown RBP33.48■■■□□ 2.95
KCNC4-207ENST00000489935 CHMP4BQ9H444 224 aaKnown RBP33.48■■■□□ 2.95
KCNC4-207ENST00000489935 SEC24BO95487 1268 aa33.47■■■□□ 2.95
KCNC4-207ENST00000489935 XPCQ01831 940 aaPredicted RBP33.47■■■□□ 2.95
KCNC4-207ENST00000489935 DDRGK1Q96HY6 314 aa33.47■■■□□ 2.95
KCNC4-207ENST00000489935 TSPYL4Q9UJ04 414 aa33.47■■■□□ 2.95
KCNC4-207ENST00000489935 USHBP1Q8N6Y0 703 aa33.46■■■□□ 2.95
KCNC4-207ENST00000489935 C1orf115Q9H7X2 142 aa33.46■■■□□ 2.95
KCNC4-207ENST00000489935 GNAT3A8MTJ3 354 aa33.45■■■□□ 2.95
KCNC4-207ENST00000489935 KCNH5Q8NCM2 988 aa33.45■■■□□ 2.95
KCNC4-207ENST00000489935 LRRC37A3O60309 1634 aa33.44■■■□□ 2.94
KCNC4-207ENST00000489935 USP19O94966 1318 aa33.43■■■□□ 2.94
KCNC4-207ENST00000489935 RGS12O14924 1447 aa33.43■■■□□ 2.94
KCNC4-207ENST00000489935 MSH6P52701 1360 aa33.41■■■□□ 2.94
KCNC4-207ENST00000489935 NBPF6Q5VWK0 638 aa33.41■■■□□ 2.94
KCNC4-207ENST00000489935 NBPF4Q96M43 638 aa33.41■■■□□ 2.94
KCNC4-207ENST00000489935 NUCB1Q02818 461 aa33.4■■■□□ 2.94
KCNC4-207ENST00000489935 IL17REQ8NFR9 667 aa33.4■■■□□ 2.94
KCNC4-207ENST00000489935 PHRF1Q9P1Y6 1649 aaKnown RBP33.4■■■□□ 2.94
KCNC4-207ENST00000489935 ZBTB7CA1YPR0 619 aa33.4■■■□□ 2.94
KCNC4-207ENST00000489935 INTS3Q68E01 1043 aaKnown RBP33.4■■■□□ 2.94
KCNC4-207ENST00000489935 MAP3K5Q99683 1374 aa33.39■■■□□ 2.94
KCNC4-207ENST00000489935 SIRT2Q8IXJ6 389 aa33.39■■■□□ 2.94
KCNC4-207ENST00000489935 C19orf44Q9H6X5 657 aa33.39■■■□□ 2.94
KCNC4-207ENST00000489935 RGPD2P0DJD1 1756 aa33.39■■■□□ 2.94
KCNC4-207ENST00000489935 TRPM3Q9HCF6 1732 aaPredicted RBP33.38■■■□□ 2.93
KCNC4-207ENST00000489935 C1orf167Q5SNV9 1468 aa33.38■■■□□ 2.93
KCNC4-207ENST00000489935 GCP02774 474 aa33.38■■■□□ 2.93
KCNC4-207ENST00000489935 SLC4A2P04920 1241 aa33.37■■■□□ 2.93
KCNC4-207ENST00000489935 PTPRCP08575 1304 aa33.36■■■□□ 2.93
KCNC4-207ENST00000489935 KRT28Q7Z3Y7 464 aa33.36■■■□□ 2.93
KCNC4-207ENST00000489935 SLIT3O75094 1523 aa33.36■■■□□ 2.93
KCNC4-207ENST00000489935 PLEKHG5O94827 1062 aa33.34■■■□□ 2.93
KCNC4-207ENST00000489935 ARHGEF25Q86VW2 580 aa33.34■■■□□ 2.93
KCNC4-207ENST00000489935 LMOD2Q6P5Q4 547 aa33.34■■■□□ 2.93
KCNC4-207ENST00000489935 CHD1LQ86WJ1 897 aa33.32■■■□□ 2.93
KCNC4-207ENST00000489935 STRCP1A6NGW2 1772 aa33.32■■■□□ 2.92
KCNC4-207ENST00000489935 LRRC59Q96AG4 307 aaKnown RBP33.32■■■□□ 2.92
KCNC4-207ENST00000489935 GCC1Q96CN9 775 aa33.32■■■□□ 2.92
KCNC4-207ENST00000489935 LNPKQ9C0E8 428 aa33.32■■■□□ 2.92
KCNC4-207ENST00000489935 KIF1AQ12756 1690 aa33.32■■■□□ 2.92
KCNC4-207ENST00000489935 G2E3Q7L622 706 aa33.31■■■□□ 2.92
KCNC4-207ENST00000489935 SLC4A3P48751 1232 aa33.3■■■□□ 2.92
KCNC4-207ENST00000489935 TAF7Q15545 349 aaPredicted RBP33.3■■■□□ 2.92
KCNC4-207ENST00000489935 ANKRD45Q5TZF3 282 aa33.27■■■□□ 2.92
KCNC4-207ENST00000489935 BABAM1Q9NWV8 329 aa33.27■■■□□ 2.92
KCNC4-207ENST00000489935 TMEM94Q12767 1356 aa33.27■■■□□ 2.92
KCNC4-207ENST00000489935 NBR1Q14596 966 aa33.26■■■□□ 2.91
KCNC4-207ENST00000489935 CEMIPQ8WUJ3 1361 aa33.24■■■□□ 2.91
KCNC4-207ENST00000489935 MST1RQ04912 1400 aa33.24■■■□□ 2.91
KCNC4-207ENST00000489935 ATF3P18847 181 aa33.23■■■□□ 2.91
KCNC4-207ENST00000489935 AXIN2Q9Y2T1 843 aa33.23■■■□□ 2.91
KCNC4-207ENST00000489935 LGR6Q9HBX8 967 aa33.22■■■□□ 2.91
KCNC4-207ENST00000489935 ALS2Q96Q42 1657 aa33.21■■■□□ 2.91
KCNC4-207ENST00000489935 FAM208AQ9UK61 1670 aaKnown RBP33.21■■■□□ 2.91
KCNC4-207ENST00000489935 F6X3S4 739 aa33.21■■■□□ 2.91
KCNC4-207ENST00000489935 ANKRD24Q8TF21 1146 aa33.21■■■□□ 2.91
KCNC4-207ENST00000489935 STK31Q9BXU1 1019 aa33.21■■■□□ 2.91
KCNC4-207ENST00000489935 CCDC30Q5VVM6 783 aa33.2■■■□□ 2.91
KCNC4-207ENST00000489935 NCAPD2Q15021 1401 aa33.2■■■□□ 2.9
KCNC4-207ENST00000489935 ATP10DQ9P241 1426 aa33.2■■■□□ 2.9
KCNC4-207ENST00000489935 MEIS3Q99687 375 aa33.2■■■□□ 2.9
KCNC4-207ENST00000489935 ANKRD44Q8N8A2 993 aa33.19■■■□□ 2.9
KCNC4-207ENST00000489935 NECTIN2Q92692 538 aa33.19■■■□□ 2.9
KCNC4-207ENST00000489935 DAXXQ9UER7 740 aaPredicted RBP33.19■■■□□ 2.9
KCNC4-207ENST00000489935 RGPD5Q99666 1765 aa33.19■■■□□ 2.9
KCNC4-207ENST00000489935 CACNA1FO60840 1977 aa33.19■■■□□ 2.9
KCNC4-207ENST00000489935 HSPA2P54652 639 aa33.18■■■□□ 2.9
KCNC4-207ENST00000489935 DDX17Q92841 729 aaKnown RBP33.18■■■□□ 2.9
KCNC4-207ENST00000489935 TBC1D32Q96NH3 1257 aa33.18■■■□□ 2.9
KCNC4-207ENST00000489935 LMO7Q8WWI1 1683 aa33.18■■■□□ 2.9
KCNC4-207ENST00000489935 DCTPP1Q9H773 170 aa33.18■■■□□ 2.9
KCNC4-207ENST00000489935 UPF2Q9HAU5 1272 aaKnown RBP33.18■■■□□ 2.9
KCNC4-207ENST00000489935 SOS1Q07889 1333 aaPredicted RBP33.17■■■□□ 2.9
KCNC4-207ENST00000489935 MED1Q15648 1581 aaPredicted RBP33.17■■■□□ 2.9
KCNC4-207ENST00000489935 PLEKHO1Q53GL0 409 aaPredicted RBP33.16■■■□□ 2.9
KCNC4-207ENST00000489935 CEP85Q6P2H3 762 aa33.16■■■□□ 2.9
KCNC4-207ENST00000489935 SLC4A10Q6U841 1118 aa33.16■■■□□ 2.9
KCNC4-207ENST00000489935 AKAP4Q5JQC9 854 aa33.16■■■□□ 2.9
KCNC4-207ENST00000489935 RPAP2Q8IXW5 612 aaPredicted RBP33.16■■■□□ 2.9
KCNC4-207ENST00000489935 ZNF530Q6P9A1 599 aaPredicted RBP33.15■■■□□ 2.9
KCNC4-207ENST00000489935 DCCP43146 1447 aa33.15■■■□□ 2.9
KCNC4-207ENST00000489935 NCOA3Q9Y6Q9 1424 aa33.15■■■□□ 2.9
KCNC4-207ENST00000489935 FLIIQ13045 1269 aa33.14■■■□□ 2.9
KCNC4-207ENST00000489935 CCT4P50991 539 aaKnown RBP33.14■■■□□ 2.9
KCNC4-207ENST00000489935 ZC3H6P61129 1189 aaKnown RBP33.13■■■□□ 2.89
KCNC4-207ENST00000489935 CAMTA1Q9Y6Y1 1673 aa33.13■■■□□ 2.89
KCNC4-207ENST00000489935 AMOTQ4VCS5 1084 aa33.12■■■□□ 2.89
KCNC4-207ENST00000489935 KDM3BQ7LBC6 1761 aa33.11■■■□□ 2.89
KCNC4-207ENST00000489935 BMP2KLQ5H9B9 411 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms