RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 LRRC7Q96NW7 1537 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 PPIP5K1Q6PFW1 1433 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 METP08581 1390 aa12.34□□□□□ -0.43
RAB3GAP1-205ENST00000489858 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
RAB3GAP1-205ENST00000489858 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
RAB3GAP1-205ENST00000489858 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
RAB3GAP1-205ENST00000489858 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
RAB3GAP1-205ENST00000489858 C3P01024 1663 aa12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 WASLO00401 505 aaPredicted RBP12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 DIAPH1O60610 1272 aaKnown RBP12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 AAMPQ13685 434 aa12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 BACH2Q9BYV9 841 aa12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 IL16Q14005 1332 aa12.33□□□□□ -0.44
RAB3GAP1-205ENST00000489858 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
RAB3GAP1-205ENST00000489858 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
RAB3GAP1-205ENST00000489858 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
RAB3GAP1-205ENST00000489858 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
RAB3GAP1-205ENST00000489858 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
RAB3GAP1-205ENST00000489858 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
RAB3GAP1-205ENST00000489858 PTCD2Q8WV60 388 aaKnown RBP12.31□□□□□ -0.44
RAB3GAP1-205ENST00000489858 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
RAB3GAP1-205ENST00000489858 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 FOXK1P85037 733 aa12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
RAB3GAP1-205ENST00000489858 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
RAB3GAP1-205ENST00000489858 NEFMP07197 916 aa12.29□□□□□ -0.44
RAB3GAP1-205ENST00000489858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB3GAP1-205ENST00000489858 CLUAP1Q96AJ1 413 aa12.29□□□□□ -0.44
RAB3GAP1-205ENST00000489858 MAP2P11137 1827 aaKnown RBP12.29□□□□□ -0.44
RAB3GAP1-205ENST00000489858 SLIT1O75093 1534 aa12.28□□□□□ -0.44
RAB3GAP1-205ENST00000489858 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
RAB3GAP1-205ENST00000489858 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
RAB3GAP1-205ENST00000489858 NUDT16Q96DE0 195 aaKnown RBP12.28□□□□□ -0.44
RAB3GAP1-205ENST00000489858 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.44
RAB3GAP1-205ENST00000489858 RIMS1Q86UR5 1692 aaKnown RBP12.27□□□□□ -0.45
RAB3GAP1-205ENST00000489858 NPM2Q86SE8 214 aaKnown RBP12.27□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PANK1Q8TE04 598 aa12.27□□□□□ -0.45
RAB3GAP1-205ENST00000489858 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
RAB3GAP1-205ENST00000489858 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
RAB3GAP1-205ENST00000489858 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.27□□□□□ -0.45
RAB3GAP1-205ENST00000489858 FCHSD2O94868 740 aa12.26□□□□□ -0.45
RAB3GAP1-205ENST00000489858 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
RAB3GAP1-205ENST00000489858 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
RAB3GAP1-205ENST00000489858 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
RAB3GAP1-205ENST00000489858 ROBO2Q9HCK4 1378 aa12.26□□□□□ -0.45
RAB3GAP1-205ENST00000489858 NALCNQ8IZF0 1738 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 RIPK4P57078 832 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 COG3Q96JB2 828 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
RAB3GAP1-205ENST00000489858 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
RAB3GAP1-205ENST00000489858 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
RAB3GAP1-205ENST00000489858 NME9Q86XW9 330 aa12.24□□□□□ -0.45
RAB3GAP1-205ENST00000489858 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
RAB3GAP1-205ENST00000489858 EID1Q9Y6B2 187 aa12.24□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PRKAR2BP31323 418 aa12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 NFE2L2Q16236 605 aa12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 TSR2Q969E8 191 aaKnown RBP12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
RAB3GAP1-205ENST00000489858 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PRR36Q9H6K5 1346 aa12.22□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
RAB3GAP1-205ENST00000489858 RGS3P49796 1198 aa12.22□□□□□ -0.45
RAB3GAP1-205ENST00000489858 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
RAB3GAP1-205ENST00000489858 OVOS2A0A0J9YW53 1432 aa12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 OVOS2Q6IE36 1432 aa12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 LMOD3Q0VAK6 560 aa12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 DSG2Q14126 1118 aa12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 MVPQ14764 893 aaKnown RBP12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
RAB3GAP1-205ENST00000489858 PTPRUQ92729 1446 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TBC1D12O60347 775 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 IGHDP01880 384 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 RLBP1P12271 317 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 IL13P35225 146 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 USP6P35125 1406 aa12.2□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TTC21BQ7Z4L5 1316 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 LTKP29376 864 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms