RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 NUTM2FA1L443 756 aa24.53■■□□□ 1.52
SYNGR1-207ENST00000489206 PTPRCP08575 1304 aa24.53■■□□□ 1.52
SYNGR1-207ENST00000489206 MAP3K19Q56UN5 1328 aa24.53■■□□□ 1.52
SYNGR1-207ENST00000489206 RBM25P49756 843 aaKnown RBP24.53■■□□□ 1.52
SYNGR1-207ENST00000489206 C1orf115Q9H7X2 142 aa24.53■■□□□ 1.52
SYNGR1-207ENST00000489206 RGS12O14924 1447 aa24.52■■□□□ 1.52
SYNGR1-207ENST00000489206 SIRT2Q8IXJ6 389 aa24.52■■□□□ 1.52
SYNGR1-207ENST00000489206 SLKQ9H2G2 1235 aaPredicted RBP24.52■■□□□ 1.52
SYNGR1-207ENST00000489206 SETD1BQ9UPS6 1966 aaKnown RBP24.51■■□□□ 1.51
SYNGR1-207ENST00000489206 LMTK3Q96Q04 1460 aa24.51■■□□□ 1.51
SYNGR1-207ENST00000489206 MARF1Q9Y4F3 1742 aaKnown RBP24.51■■□□□ 1.51
SYNGR1-207ENST00000489206 LRRC37A3O60309 1634 aa24.5■■□□□ 1.51
SYNGR1-207ENST00000489206 EIF5BO60841 1220 aaKnown RBP24.49■■□□□ 1.51
SYNGR1-207ENST00000489206 NGDNQ8NEJ9 315 aaKnown RBP24.49■■□□□ 1.51
SYNGR1-207ENST00000489206 HSPA2P54652 639 aa24.49■■□□□ 1.51
SYNGR1-207ENST00000489206 MCM10Q7L590 875 aa24.49■■□□□ 1.51
SYNGR1-207ENST00000489206 IGSF1Q8N6C5 1336 aa24.48■■□□□ 1.51
SYNGR1-207ENST00000489206 ATP10DQ9P241 1426 aa24.46■■□□□ 1.51
SYNGR1-207ENST00000489206 HSCBQ8IWL3 235 aa24.46■■□□□ 1.51
SYNGR1-207ENST00000489206 DCTPP1Q9H773 170 aa24.46■■□□□ 1.51
SYNGR1-207ENST00000489206 CACNA1FO60840 1977 aa24.46■■□□□ 1.51
SYNGR1-207ENST00000489206 RPAP2Q8IXW5 612 aaPredicted RBP24.45■■□□□ 1.51
SYNGR1-207ENST00000489206 GAS2L2Q8NHY3 880 aa24.45■■□□□ 1.51
SYNGR1-207ENST00000489206 ANKRD44Q8N8A2 993 aa24.45■■□□□ 1.5
SYNGR1-207ENST00000489206 RTF1Q92541 710 aaKnown RBP24.45■■□□□ 1.5
SYNGR1-207ENST00000489206 SNX21Q969T3 373 aa24.45■■□□□ 1.5
SYNGR1-207ENST00000489206 CEP170BQ9Y4F5 1589 aaPredicted RBP24.45■■□□□ 1.5
SYNGR1-207ENST00000489206 HTATSF1O43719 755 aaKnown RBP24.44■■□□□ 1.5
SYNGR1-207ENST00000489206 AMPHP49418 695 aa24.43■■□□□ 1.5
SYNGR1-207ENST00000489206 NCOA3Q9Y6Q9 1424 aa24.43■■□□□ 1.5
SYNGR1-207ENST00000489206 MTHFSDQ2M296 383 aaKnown RBP24.42■■□□□ 1.5
SYNGR1-207ENST00000489206 CHMP5Q9NZZ3 219 aa24.42■■□□□ 1.5
SYNGR1-207ENST00000489206 KRT24Q2M2I5 525 aa24.42■■□□□ 1.5
SYNGR1-207ENST00000489206 SOX12O15370 315 aa24.41■■□□□ 1.5
SYNGR1-207ENST00000489206 FAM208AQ9UK61 1670 aaKnown RBP24.41■■□□□ 1.5
SYNGR1-207ENST00000489206 MSH6P52701 1360 aa24.41■■□□□ 1.5
SYNGR1-207ENST00000489206 EYA1Q99502 592 aa24.4■■□□□ 1.5
SYNGR1-207ENST00000489206 N4BP2Q86UW6 1770 aaPredicted RBP24.4■■□□□ 1.5
SYNGR1-207ENST00000489206 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
SYNGR1-207ENST00000489206 RTL1A6NKG5 1358 aa24.4■■□□□ 1.5
SYNGR1-207ENST00000489206 CDC45O75419 566 aa24.39■■□□□ 1.49
SYNGR1-207ENST00000489206 TBC1D9Q6ZT07 1266 aa24.39■■□□□ 1.49
SYNGR1-207ENST00000489206 TSPYL4Q9UJ04 414 aa24.39■■□□□ 1.49
SYNGR1-207ENST00000489206 NWD1Q149M9 1564 aa24.38■■□□□ 1.49
SYNGR1-207ENST00000489206 CEP85Q6P2H3 762 aa24.38■■□□□ 1.49
SYNGR1-207ENST00000489206 SOS1Q07889 1333 aaPredicted RBP24.38■■□□□ 1.49
SYNGR1-207ENST00000489206 PLEKHM2Q8IWE5 1019 aa24.37■■□□□ 1.49
SYNGR1-207ENST00000489206 NLRP6P59044 892 aa24.36■■□□□ 1.49
SYNGR1-207ENST00000489206 SLC4A2P04920 1241 aa24.36■■□□□ 1.49
SYNGR1-207ENST00000489206 LTN1O94822 1766 aa24.35■■□□□ 1.49
SYNGR1-207ENST00000489206 FOXO3O43524 673 aa24.35■■□□□ 1.49
SYNGR1-207ENST00000489206 KCNA6P17658 529 aa24.35■■□□□ 1.49
SYNGR1-207ENST00000489206 CCT4P50991 539 aaKnown RBP24.35■■□□□ 1.49
SYNGR1-207ENST00000489206 ZNF142P52746 1687 aaPredicted RBP24.35■■□□□ 1.49
SYNGR1-207ENST00000489206 BABAM1Q9NWV8 329 aa24.34■■□□□ 1.49
SYNGR1-207ENST00000489206 HOXC9P31274 260 aa24.34■■□□□ 1.49
SYNGR1-207ENST00000489206 TTC22Q5TAA0 569 aa24.34■■□□□ 1.49
SYNGR1-207ENST00000489206 HMMRO75330 724 aa24.33■■□□□ 1.48
SYNGR1-207ENST00000489206 GSPT1P15170 499 aaKnown RBP24.32■■□□□ 1.48
SYNGR1-207ENST00000489206 GNAT3A8MTJ3 354 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 KIF2CQ99661 725 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 MEIS3Q99687 375 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 CIZ1Q9ULV3 898 aaPredicted RBP24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 MAP3K5Q99683 1374 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 MCM4P33991 863 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 DDIT3P35638 169 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 STK31Q9BXU1 1019 aa24.31■■□□□ 1.48
SYNGR1-207ENST00000489206 SPRYD3Q8NCJ5 442 aa24.3■■□□□ 1.48
SYNGR1-207ENST00000489206 MIS18AQ9NYP9 233 aa24.29■■□□□ 1.48
SYNGR1-207ENST00000489206 STRCQ7RTU9 1775 aa24.29■■□□□ 1.48
SYNGR1-207ENST00000489206 PHRF1Q9P1Y6 1649 aaKnown RBP24.29■■□□□ 1.48
SYNGR1-207ENST00000489206 PXDNLA1KZ92 1463 aa24.28■■□□□ 1.48
SYNGR1-207ENST00000489206 CCDC30Q5VVM6 783 aa24.27■■□□□ 1.48
SYNGR1-207ENST00000489206 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
SYNGR1-207ENST00000489206 HSP90AB1P08238 724 aaKnown RBP24.27■■□□□ 1.48
SYNGR1-207ENST00000489206 G2E3Q7L622 706 aa24.26■■□□□ 1.47
SYNGR1-207ENST00000489206 NFAT5O94916 1531 aa24.26■■□□□ 1.47
SYNGR1-207ENST00000489206 PHF8Q9UPP1 1060 aa24.24■■□□□ 1.47
SYNGR1-207ENST00000489206 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
SYNGR1-207ENST00000489206 CASC1Q6TDU7 716 aa24.23■■□□□ 1.47
SYNGR1-207ENST00000489206 K7ELQ4 463 aaPredicted RBP24.23■■□□□ 1.47
SYNGR1-207ENST00000489206 GNAI2P04899 355 aa24.23■■□□□ 1.47
SYNGR1-207ENST00000489206 TUBGCP6Q96RT7 1819 aa24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 MED1Q15648 1581 aaPredicted RBP24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 GNAI3P08754 354 aa24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 L1TD1Q5T7N2 865 aaKnown RBP24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 SLC4A10Q6U841 1118 aa24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 C16orf71Q8IYS4 520 aaPredicted RBP24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 FLIIQ13045 1269 aa24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 TAF7Q15545 349 aaPredicted RBP24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 IL27Q8NEV9 243 aa24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 OSBPL3Q9H4L5 887 aa24.22■■□□□ 1.47
SYNGR1-207ENST00000489206 RABEP1Q15276 862 aa24.21■■□□□ 1.47
SYNGR1-207ENST00000489206 ANKLE2Q86XL3 938 aa24.21■■□□□ 1.47
SYNGR1-207ENST00000489206 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
SYNGR1-207ENST00000489206 KDM3BQ7LBC6 1761 aa24.21■■□□□ 1.47
SYNGR1-207ENST00000489206 F6X3S4 739 aa24.2■■□□□ 1.46
SYNGR1-207ENST00000489206 NUTM2GQ5VZR2 741 aa24.2■■□□□ 1.46
SYNGR1-207ENST00000489206 LMO7Q8WWI1 1683 aa24.2■■□□□ 1.46
SYNGR1-207ENST00000489206 IL17REQ8NFR9 667 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms